Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1G47
DownloadVisualize
BU of 1g47 by Molmil
1ST LIM DOMAIN OF PINCH PROTEIN
Descriptor: PINCH PROTEIN, ZINC ION
Authors:Velyvis, A, Yang, Y, Wu, C, Qin, J.
Deposit date:2000-10-26
Release date:2001-02-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the focal adhesion adaptor PINCH LIM1 domain and characterization of its interaction with the integrin-linked kinase ankyrin repeat domain.
J.Biol.Chem., 276, 2001
6HMY
DownloadVisualize
BU of 6hmy by Molmil
Cholera toxin classical B-pentamer in complex with fucosyl-GM1
Descriptor: BICINE, CALCIUM ION, Cholera enterotoxin B-subunit, ...
Authors:Krengel, U, Heim, J.B.
Deposit date:2018-09-13
Release date:2019-08-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site.
Sci Rep, 9, 2019
3MTG
DownloadVisualize
BU of 3mtg by Molmil
Crystal structure of human S-adenosyl homocysteine hydrolase-like 1 protein
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative adenosylhomocysteinase 2
Authors:Wisniewska, M, Siponen, M.I, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Schutz, P, Thorsell, A.G, Tresaugues, L, van der Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Schuler, H, Structural Genomics Consortium (SGC)
Deposit date:2010-04-30
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of human S-adenosyl homocysteine hydrolase-like 1 protein
TO BE PUBLISHED
8BOO
DownloadVisualize
BU of 8boo by Molmil
Spatials structure of amyloidogenic SEM1(45-67) peptide
Descriptor: Semenogelin-1
Authors:Blokhin, D.S, Osetrina, D.A.
Deposit date:2022-11-15
Release date:2023-01-18
Last modified:2024-01-31
Method:SOLUTION NMR
Cite:Spatials structure of amyloidogenic SEM1(45-67) peptide
To Be Published
3MVJ
DownloadVisualize
BU of 3mvj by Molmil
Human cyclic AMP-dependent protein kinase PKA inhibitor complex
Descriptor: (3R)-1-(5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-3-amine, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Pandit, J, Vajdos, F.
Deposit date:2010-05-04
Release date:2010-06-02
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Design of selective, ATP-competitive inhibitors of Akt.
J.Med.Chem., 53, 2010
3MUK
DownloadVisualize
BU of 3muk by Molmil
Crystal structure of Brd4 bromodomain 1 with propionylated histone H3-K(prop)23
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, peptide of Histone H3.3
Authors:Vollmuth, F, Geyer, M.
Deposit date:2010-05-03
Release date:2010-08-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Interaction of propionylated and butyrylated histone H3 lysine marks with Brd4 bromodomains
Angew.Chem.Int.Ed.Engl., 49, 2010
1GGL
DownloadVisualize
BU of 1ggl by Molmil
HUMAN CELLULAR RETINOL BINDING PROTEIN III
Descriptor: PROTEIN (CELLULAR RETINOL-BINDING PROTEIN III)
Authors:Calderone, V, Zanotti, G, Folli, C, Ottonello, S, Bolchi, A, Stoppini, M, Berni, R.
Deposit date:2000-08-23
Release date:2001-03-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Identification, retinoid binding, and x-ray analysis of a human retinol-binding protein.
Proc.Natl.Acad.Sci.USA, 98, 2001
1GG5
DownloadVisualize
BU of 1gg5 by Molmil
CRYSTAL STRUCTURE OF A COMPLEX OF HUMAN NAD[P]H-QUINONE OXIDOREDUCTASE AND A CHEMOTHERAPEUTIC DRUG (E09) AT 2.5 A RESOLUTION
Descriptor: 3-HYDROXYMETHYL-5-AZIRIDINYL-1METHYL-2-[1H-INDOLE-4,7-DIONE]-PROPANOL, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H DEHYDROGENASE [QUINONE] 1
Authors:Faig, M, Bianchet, M.A, Winski, S, Hargreaves, R, Moody, C.J, Hudnott, A.R, Ross, D, Amzel, L.M.
Deposit date:2000-07-12
Release date:2001-09-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based development of anticancer drugs: complexes of NAD(P)H:quinone oxidoreductase 1 with chemotherapeutic quinones.
Structure, 9, 2001
8DNT
DownloadVisualize
BU of 8dnt by Molmil
SARS-CoV-2 specific T cell receptor
Descriptor: Beta-2-microglobulin, MHC class I antigen alpha chain, Nucleoprotein, ...
Authors:Gallagher, D.T, Wu, D, Gowthaman, R, Pierce, B.G, Mariuzza, R.A, Weng, N.P.
Deposit date:2022-07-11
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:SARS-CoV-2 infection establishes a stable and age-independent CD8 + T cell response against a dominant nucleocapsid epitope using restricted T cell receptors.
Nat Commun, 14, 2023
3MTN
DownloadVisualize
BU of 3mtn by Molmil
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
Descriptor: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ...
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2010-04-30
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
8DSX
DownloadVisualize
BU of 8dsx by Molmil
NMR STRUCTURE OF THE BACTERIOPHAGE LAMBDA EA22 C-TERMINAL DOMAIN
Descriptor: Protein ea22
Authors:Donaldson, L.W.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Ea22 Proteins from Lambda and Shiga Toxin-Producing Bacteriophages Balance Structural Diversity with Functional Similarity.
ACS Omega, 5, 2020
1FYJ
DownloadVisualize
BU of 1fyj by Molmil
SOLUTION STRUCTURE OF MULTI-FUNCTIONAL PEPTIDE MOTIF-1 PRESENT IN HUMAN GLUTAMYL-PROLYL TRNA SYNTHETASE (EPRS).
Descriptor: MULTIFUNCTIONAL AMINOACYL-TRNA SYNTHETASE
Authors:Jeong, E.-J, Hwang, G.-S, Kim, K.H, Kim, M.J, Kim, S, Kim, K.-S.
Deposit date:2000-10-02
Release date:2001-03-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural analysis of multifunctional peptide motifs in human bifunctional tRNA synthetase: identification of RNA-binding residues and functional implications for tandem repeats.
Biochemistry, 39, 2000
1G4Y
DownloadVisualize
BU of 1g4y by Molmil
1.60 A CRYSTAL STRUCTURE OF THE GATING DOMAIN FROM SMALL CONDUCTANCE POTASSIUM CHANNEL COMPLEXED WITH CALCIUM-CALMODULIN
Descriptor: CALCIUM ION, CALCIUM-ACTIVATED POTASSIUM CHANNEL RSK2, CALMODULIN, ...
Authors:Schumacher, M.A, Rivard, A, Bachinger, H.P, Adelman, J.P.
Deposit date:2001-01-07
Release date:2001-05-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the gating domain of a Ca2+-activated K+ channel complexed with Ca2+/calmodulin.
Nature, 410, 2001
6HGI
DownloadVisualize
BU of 6hgi by Molmil
Crystal structure of Alpha1-antichymotrypsin variant NewBG-III: a new binding globulin in complex with corticosterone
Descriptor: Alpha-1-antichymotrypsin, CORTICOSTERONE
Authors:Schmidt, K, Muller, Y.A.
Deposit date:2018-08-23
Release date:2019-05-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.517 Å)
Cite:NewBG: A surrogate corticosteroid-binding globulin with an unprecedentedly high ligand release efficacy.
J.Struct.Biol., 207, 2019
3BBP
DownloadVisualize
BU of 3bbp by Molmil
Rab6-GTP:GCC185 Rab binding domain complex
Descriptor: GRIP and coiled-coil domain-containing protein 2, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Schweizer Burguete, A, Fenn, T.D, Brunger, A.T, Pfeffer, S.R.
Deposit date:2007-11-09
Release date:2008-02-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Rab and Arl GTPase family members cooperate in the localization of the golgin GCC185.
Cell(Cambridge,Mass.), 132, 2008
6NE1
DownloadVisualize
BU of 6ne1 by Molmil
Designed repeat protein in complex with Fz4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Frizzled-4, Pfs, ...
Authors:Miao, Y, Jude, K.M, Garcia, K.C.
Deposit date:2018-12-15
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.011 Å)
Cite:Receptor subtype discrimination using extensive shape complementary designed interfaces.
Nat.Struct.Mol.Biol., 26, 2019
6NE4
DownloadVisualize
BU of 6ne4 by Molmil
Designed repeat protein specifically in complex with Fz7CRD
Descriptor: 1,2-ETHANEDIOL, Designed repeat binding protein, Frizzled-7, ...
Authors:Miao, Y, Jude, K.M, Garcia, K.C.
Deposit date:2018-12-16
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Receptor subtype discrimination using extensive shape complementary designed interfaces.
Nat.Struct.Mol.Biol., 26, 2019
4R2Q
DownloadVisualize
BU of 4r2q by Molmil
Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5FC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5FC)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-12
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
6HNI
DownloadVisualize
BU of 6hni by Molmil
The ligand-bound, closed structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.
Descriptor: 1,2-ETHANEDIOL, ABC-type transport system, sugar-family extracellular solute-binding protein, ...
Authors:Bradshaw, W.J, Kovacs-Simon, A, Harmer, N.J, Michell, S.L, Acharya, K.R.
Deposit date:2018-09-15
Release date:2019-08-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Molecular features of lipoprotein CD0873: A potential vaccine against the human pathogenClostridioides difficile.
J.Biol.Chem., 294, 2019
1GH6
DownloadVisualize
BU of 1gh6 by Molmil
RETINOBLASTOMA POCKET COMPLEXED WITH SV40 LARGE T ANTIGEN
Descriptor: Large T antigen, Retinoblastoma-associated protein
Authors:Kim, H.Y, Cho, Y.
Deposit date:2000-11-15
Release date:2001-11-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for the inactivation of retinoblastoma tumor suppressor by SV40 large T antigen.
EMBO J., 20, 2001
4RH7
DownloadVisualize
BU of 4rh7 by Molmil
Crystal structure of human cytoplasmic dynein 2 motor domain in complex with ADP.Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ADP ORTHOVANADATE, ...
Authors:Schmidt, H, Zalyte, R, Urnavicius, L, Carter, A.P.
Deposit date:2014-10-01
Release date:2014-12-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structure of human cytoplasmic dynein-2 primed for its power stroke.
Nature, 518, 2015
1FZG
DownloadVisualize
BU of 1fzg by Molmil
CRYSTAL STRUCTURE OF FRAGMENT D FROM HUMAN FIBRINOGEN WITH THE PEPTIDE LIGAND GLY-HIS-ARG-PRO-AMIDE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FIBRINOGEN
Authors:Everse, S.J, Spraggon, G, Veerapandian, L, Doolittle, R.F.
Deposit date:1999-01-01
Release date:1999-06-08
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational changes in fragments D and double-D from human fibrin(ogen) upon binding the peptide ligand Gly-His-Arg-Pro-amide.
Biochemistry, 38, 1999
6NFY
DownloadVisualize
BU of 6nfy by Molmil
Crystal structure of nonphosphorylated, HPK1 kinase domain in complex with sunitinib in the inactive state.
Descriptor: Mitogen-activated protein kinase kinase kinase kinase 1, N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide
Authors:Johnson, E, McTigue, M, Cronin, C.N.
Deposit date:2018-12-21
Release date:2019-05-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Multiple conformational states of the HPK1 kinase domain in complex with sunitinib reveal the structural changes accompanying HPK1 trans-regulation.
J.Biol.Chem., 294, 2019
4ROU
DownloadVisualize
BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
Descriptor: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
Authors:Li, F, Liu, X, Yang, X, Shen, Y.
Deposit date:2014-10-29
Release date:2015-11-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.713 Å)
Cite:Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
1GEN
DownloadVisualize
BU of 1gen by Molmil
C-TERMINAL DOMAIN OF GELATINASE A
Descriptor: CALCIUM ION, CHLORIDE ION, GELATINASE A, ...
Authors:Libson, A.M, Gittis, A.G, Collier, I.E, Marmer, B.L, Goldberg, G.G, Lattman, E.E.
Deposit date:1995-07-19
Release date:1996-08-17
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the haemopexin-like C-terminal domain of gelatinase A.
Nat.Struct.Biol., 2, 1995

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon