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PDB: 257 results

9BE2
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BU of 9be2 by Molmil
Structure of the E. coli nucleic associated protein, YejK
Descriptor: Nucleoid-associated protein YejK
Authors:Schumacher, M.A.
Deposit date:2024-04-13
Release date:2024-05-15
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (3.56 Å)
Cite:Structure of the E. coli nucleoid-associated protein YejK reveals a novel DNA binding clamp.
Nucleic Acids Res., 52, 2024
1ZVV
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BU of 1zvv by Molmil
Crystal structure of a ccpa-crh-dna complex
Descriptor: DNA recognition strand CRE, Glucose-resistance amylase regulator, HPr-like protein crh, ...
Authors:Schumacher, M.A, Brennan, R.G, Hillen, W, Seidel, G.
Deposit date:2005-06-02
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Phosphoprotein Crh-Ser46-P displays altered binding to CcpA to effect carbon catabolite regulation.
J.Biol.Chem., 281, 2006
6PFJ
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BU of 6pfj by Molmil
Structure of S. venezuelae RsiG-WhiG-(ci-di-GMP) complex, P64 crystal form
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), AmfC protein, RNA polymerase sigma factor
Authors:Schumacher, M.A.
Deposit date:2019-06-21
Release date:2019-11-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:c-di-GMP Arms an Anti-sigma to Control Progression of Multicellular Differentiation in Streptomyces.
Mol.Cell, 77, 2020
6P5R
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BU of 6p5r by Molmil
Structure of T. brucei MERS1-GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitochondrial edited mRNA stability factor 1
Authors:Schumacher, M.A.
Deposit date:2019-05-30
Release date:2019-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
4LNK
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BU of 4lnk by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of GS-glutamate-AMPPCP complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLUTAMIC ACID, Glutamine synthetase, ...
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
4LNF
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BU of 4lnf by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of GS-Q
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.949 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
4LNN
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BU of 4lnn by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of apo form of GS
Descriptor: Glutamine synthetase, MAGNESIUM ION, SULFATE ION
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
4LNI
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BU of 4lni by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of the transition state complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-11-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5793 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
4LNO
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BU of 4lno by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: form two of GS-1
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
8CSH
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BU of 8csh by Molmil
Structure of the DNA binding domain of pSK1 Par partition protein bound to centromere DNA
Descriptor: DNA (5'-D(*TP*AP*GP*TP*TP*AP*GP*GP*TP*AP*CP*CP*TP*AP*AP*CP*A)-3'), DNA (5'-D(P*TP*GP*TP*TP*AP*GP*GP*TP*AP*CP*CP*TP*AP*AP*C)-3'), Par
Authors:Schumacher, M.A.
Deposit date:2022-05-12
Release date:2022-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular Analysis of pSK1 par: A Novel Plasmid Partitioning System Encoded by Staphylococcal Multiresistance Plasmids.
J.Mol.Biol., 434, 2022
8DPK
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structure of T. brucei RESC5
Descriptor: RESC5
Authors:Schumacher, M.A, Salinas, R, Cannistraci, E.
Deposit date:2022-07-15
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the T. brucei kinetoplastid RNA editing substrate-binding complex core component, RESC5.
Plos One, 18, 2023
1QVU
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BU of 1qvu by Molmil
Crystal structure of the multidrug binding transcriptional repressor QacR bound to two drugs: ethidium and proflavine
Descriptor: ETHIDIUM, PROFLAVIN, Transcriptional regulator qacR
Authors:Schumacher, M.A, Miller, M.C, Brennan, R.G.
Deposit date:2003-08-28
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structural mechanism of the simultaneous binding of two drugs to a multidrug-binding protein
Embo J., 23, 2004
1QVT
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BU of 1qvt by Molmil
CRYSTAL STRUCTURE OF THE MULTIDRUG BINDING TRANSCRIPTIONAL REPRESSOR QACR BOUND TO THE DRUG PROFLAVINE
Descriptor: PROFLAVIN, SULFATE ION, Transcriptional regulator qacR
Authors:Schumacher, M.A, Miller, M.C, Brennan, R.G.
Deposit date:2003-08-28
Release date:2004-08-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structural mechanism of the simultaneous binding of two drugs to a multidrug-binding protein
Embo J., 23, 2004
1QX7
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BU of 1qx7 by Molmil
Crystal structure of apoCaM bound to the gating domain of small conductance Ca2+-activated potassium channel
Descriptor: Calmodulin, Small conductance calcium-activated potassium channel protein 2
Authors:Schumacher, M.A, Crum, M, Miller, M.C.
Deposit date:2003-09-04
Release date:2004-08-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Crystal structures of apocalmodulin and an apocalmodulin/SK potassium channel gating domain complex.
STRUCTURE, 12, 2004
1QX5
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BU of 1qx5 by Molmil
Crystal structure of apoCalmodulin
Descriptor: Calmodulin
Authors:Schumacher, M.A, Crum, M, Miller, M.C.
Deposit date:2003-09-04
Release date:2004-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Crystal structures of apocalmodulin and an apocalmodulin/SK potassium channel gating domain complex.
STRUCTURE, 12, 2004
6ALX
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BU of 6alx by Molmil
Structure of F. tularensis MglA-SspA solved in the presence of polyP
Descriptor: Macrophage growth locus A, Stringent starvation protein A
Authors:Schumacher, M.A.
Deposit date:2017-08-08
Release date:2017-08-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Dissection of the molecular circuitry controlling virulence in Francisella tularensis.
Genes Dev., 31, 2017
6AMK
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BU of 6amk by Molmil
Structure of Streptomyces venezuelae BldC-whiI opt complex
Descriptor: DNA (5'-D(*AP*AP*TP*GP*TP*CP*CP*GP*AP*AP*TP*TP*AP*CP*CP*CP*GP*AP*AP*TP*TP*G)-3'), DNA (5'-D(*TP*TP*CP*AP*AP*TP*TP*CP*GP*GP*GP*TP*AP*AP*TP*TP*CP*GP*GP*GP*CP*A)-3'), Putative DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2017-08-09
Release date:2018-03-28
Last modified:2018-11-07
Method:X-RAY DIFFRACTION (3.288 Å)
Cite:The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
6AMA
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BU of 6ama by Molmil
Structure of S. coelicolor/S. venezuelae BldC-smeA-ssfA complex to 3.09 Angstrom
Descriptor: DNA (99-MER), Putative DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2017-08-09
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:The MerR-like protein BldC binds DNA direct repeats as cooperative multimers to regulate Streptomyces development.
Nat Commun, 9, 2018
3BTI
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BU of 3bti by Molmil
crystal structure of QacR(E58Q) bound to berberine
Descriptor: BERBERINE, HTH-type transcriptional regulator qacR, SULFATE ION
Authors:Schumacher, M.A, Schuman, J.T, Brennan, R.G.
Deposit date:2007-12-28
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
3BTC
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BU of 3btc by Molmil
crystal structure of QacR(E57Q) bound to malachite green
Descriptor: HTH-type transcriptional regulator qacR, MALACHITE GREEN, SULFATE ION
Authors:Schumacher, M.A, Schuman, J.T, Brennan, R.G.
Deposit date:2007-12-28
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
3BTJ
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BU of 3btj by Molmil
crystal structure of QacR(E58Q) bound to dequalinium
Descriptor: DEQUALINIUM, HTH-type transcriptional regulator qacR, SULFATE ION
Authors:Schumacher, M.A, Schuman, J.T, Brennan, R.G.
Deposit date:2007-12-28
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
6PFV
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BU of 6pfv by Molmil
Structure of S. venezuelae RisG-WhiG-c-di-GMP complex: orthorhombic crystal form
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), AmfC protein, RNA polymerase sigma factor
Authors:Schumacher, M.A.
Deposit date:2019-06-22
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:c-di-GMP Arms an Anti-sigma to Control Progression of Multicellular Differentiation in Streptomyces.
Mol.Cell, 77, 2020
6WEG
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BU of 6weg by Molmil
Structure of Ft (MglA-SspA)-ppGpp-PigR peptide complex
Descriptor: GUANOSINE-5',3'-TETRAPHOSPHATE, MAGNESIUM ION, MglA, ...
Authors:Schumacher, M.A, Brennan, R.
Deposit date:2020-04-02
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Basis for Virulence Activation of Francisella tularensis.
Mol.Cell, 81, 2021
1WET
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BU of 1wet by Molmil
STRUCTURE OF THE PURR-GUANINE-PURF OPERATOR COMPLEX
Descriptor: DNA (5'-D(*AP*AP*CP*GP*AP*AP*AP*AP*CP*GP*TP*TP*TP*TP*CP*GP*T )-3'), GUANINE, PROTEIN (PURINE REPRESSOR)
Authors:Schumacher, M.A, Glasfeld, A, Zalkin, H, Brennan, R.G.
Deposit date:1997-04-27
Release date:1997-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The X-ray structure of the PurR-guanine-purF operator complex reveals the contributions of complementary electrostatic surfaces and a water-mediated hydrogen bond to corepressor specificity and binding affinity.
J.Biol.Chem., 272, 1997
5E1L
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BU of 5e1l by Molmil
Structural and functional analysis of the E. coli FtsZ interacting protein, ZapC, reveals insight into molecular properties of a novel Z ring stabilizing protein
Descriptor: Cell division protein ZapC
Authors:Schumacher, M.A, Huang, K.-H, Tchorzewski, L, Zeng, W, Janakiraman, A.
Deposit date:2015-09-29
Release date:2015-12-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Analyses Reveal Insights into the Molecular Properties of the Escherichia coli Z Ring Stabilizing Protein, ZapC.
J.Biol.Chem., 291, 2016

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