Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2JS0
DownloadVisualize
BU of 2js0 by Molmil
Solution structure of second SH3 domain of adaptor Nck
Descriptor: Cytoplasmic protein NCK1
Authors:Hake, M.J, Choowongkomon, K, Carlin, C.R, Sonnichsen, F.D.
Deposit date:2007-06-29
Release date:2008-02-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Specificity determinants of a novel Nck interaction with the juxtamembrane domain of the epidermal growth factor receptor.
Biochemistry, 47, 2008
2JUK
DownloadVisualize
BU of 2juk by Molmil
guanidino neomycin B recognition of an HIV-1 RNA helix
Descriptor: (1S,2R,3S,4R,6S)-4,6-bis{[amino(iminio)methyl]amino}-2-{[3-O-(2,6-bis{[amino(iminio)methyl]amino}-2,6-dideoxy-beta-L-glucopyranosyl)-beta-D-arabinofuranosyl]oxy}-3-hydroxycyclohexyl 2,6-bis{[amino(iminio)methyl]amino}-2,6-dideoxy-beta-L-glucopyranoside, HIV-1 frameshift site RNA
Authors:Staple, D.W, Venditti, V, Niccolai, N, Elson-Schwab, L, Tor, Y, Butcher, S.E.
Deposit date:2007-08-30
Release date:2007-11-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Guanidinoneomycin B Recognition of an HIV-1 RNA Helix.
Chembiochem, 9, 2008
2JYT
DownloadVisualize
BU of 2jyt by Molmil
Human Granulin C, isomer 1
Descriptor: Granulin-5
Authors:Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
Deposit date:2007-12-19
Release date:2008-04-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
2BP4
DownloadVisualize
BU of 2bp4 by Molmil
Zinc-binding domain of Alzheimer's disease amyloid beta-peptide in TFE-water (80-20) solution
Descriptor: AMYLOID BETA A4 PROTEIN
Authors:Zirah, S, Kozin, S.A, Mazur, A.K, Blond, A, Cheminant, M, Segalas-Milazzo, I, Debey, P, Rebuffat, S.
Deposit date:2005-04-18
Release date:2005-04-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Changes of Region 1-16 of the Alzheimer Disease Amyloid Beta-Peptide Upon Zinc Binding and in Vitro Aging.
J.Biol.Chem., 281, 2006
2JYV
DownloadVisualize
BU of 2jyv by Molmil
Human Granulin F
Descriptor: Granulin-2
Authors:Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
Deposit date:2007-12-19
Release date:2008-04-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
2JTW
DownloadVisualize
BU of 2jtw by Molmil
Solution structure of TM7 bound to DPC micelles
Descriptor: transmembrane helix 7 of yeast VATPase
Authors:Zangger, K, Respondek, M, Madl, T.
Deposit date:2007-08-08
Release date:2008-08-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Positioning of micelle-bound peptides by paramagnetic relaxation enhancements.
J.Phys.Chem.B, 113, 2009
2JYE
DownloadVisualize
BU of 2jye by Molmil
Human Granulin A
Descriptor: Granulin A
Authors:Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
Deposit date:2007-12-13
Release date:2008-04-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
2JTM
DownloadVisualize
BU of 2jtm by Molmil
Solution structure of Sso6901 from Sulfolobus solfataricus P2
Descriptor: Putative uncharacterized protein
Authors:Feng, Y, Guo, L, Huang, L, Wang, J.
Deposit date:2007-08-03
Release date:2008-04-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea
Nucleic Acids Res., 36, 2008
2JP1
DownloadVisualize
BU of 2jp1 by Molmil
Solution structure of the alternative conformation of XCL1/Lymphotactin
Descriptor: Lymphotactin
Authors:Volkman, B.F, Tuinstra, R.L, Peterson, F.C.
Deposit date:2007-04-17
Release date:2008-03-11
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Interconversion between two unrelated protein folds in the lymphotactin native state
Proc.Natl.Acad.Sci.Usa, 105, 2008
2JOX
DownloadVisualize
BU of 2jox by Molmil
Embryonic Neural Inducing Factor Churchill is not a DNA-Binding Zinc Finger Protein: Solution Structure Reveals a Solvent-Exposed beta-Sheet and Zinc Binuclear Cluster
Descriptor: Churchill protein, ZINC ION
Authors:Lee, B.M, Buck-Koehntop, B.A, Martinez-Yamout, M.A, Gottesfeld, J.M, Dyson, H, Wright, P.E.
Deposit date:2007-04-07
Release date:2007-08-21
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Embryonic Neural Inducing Factor Churchill Is not a DNA-binding Zinc Finger Protein: Solution Structure Reveals a Solvent-exposed beta-Sheet and Zinc Binuclear Cluster
J.Mol.Biol., 371, 2007
2HDM
DownloadVisualize
BU of 2hdm by Molmil
Solution structure of V21C/V59C Lymphotactin/XCL1
Descriptor: Lymphotactin
Authors:Volkman, B.F, Tuinstra, R.L, Peterson, F.C, Elgin, E.S.
Deposit date:2006-06-20
Release date:2007-05-01
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:An engineered second disulfide bond restricts lymphotactin/XCL1 to a chemokine-like conformation with XCR1 agonist activity
Biochemistry, 46, 2007
2HDL
DownloadVisualize
BU of 2hdl by Molmil
Solution structure of Brak/CXCL14
Descriptor: Small inducible cytokine B14
Authors:Peterson, F.C, Thorpe, J.A, Harder, A.G, Volkman, B.F, Schwarze, S.R.
Deposit date:2006-06-20
Release date:2006-10-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Determinants Involved in the Regulation of CXCL14/BRAK Expression by the 26 S Proteasome.
J.Mol.Biol., 363, 2006
2KHX
DownloadVisualize
BU of 2khx by Molmil
Drosha double-stranded RNA binding motif
Descriptor: Ribonuclease 3
Authors:Mueller, G.A, Miller, M, Ghosh, M, DeRose, E.F, London, R.E, Hall, T.
Deposit date:2009-04-13
Release date:2010-02-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Drosha double-stranded RNA-binding domain.
Silence, 1, 2010
2KEK
DownloadVisualize
BU of 2kek by Molmil
Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3
Descriptor: DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*GP*AP*GP*CP*GP*CP*AP*AP*CP*GP*CP*AP*AP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*TP*TP*GP*CP*GP*TP*TP*GP*CP*GP*CP*TP*CP*AP*CP*TP*GP*CP*CP*G)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KEI
DownloadVisualize
BU of 2kei by Molmil
Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1
Descriptor: DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KHH
DownloadVisualize
BU of 2khh by Molmil
Structural requirements for the UBA domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation Tho complex component Hpr1 and nucleoporin FxFG repeats
Descriptor: FxFG, mRNA export factor MEX67
Authors:Hobeika, M, Brockmann, C, Gruessing, F, Neuhaus, D, Divita, G, Stewart, M, Dargemont, C.
Deposit date:2009-04-06
Release date:2009-05-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural requirements for the ubiquitin-associated domain of the mRNA export factor Mex67 to bind its specific targets, the transcription elongation THO complex component Hpr1 and nucleoporin FXFG repeats
J.Biol.Chem., 284, 2009
2KDT
DownloadVisualize
BU of 2kdt by Molmil
PC1/3 DCSG sorting domain structure in DPC
Descriptor: Neuroendocrine convertase 1
Authors:Dikeakos, J.D, Di Lello, P, Lacombe, M.J, Ghirlando, R, Legault, P, Reudelhuber, T.L, Omichinski, J.G.
Deposit date:2009-01-19
Release date:2009-04-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Functional and structural characterization of a dense core secretory granule sorting domain from the PC1/3 protease.
Proc.Natl.Acad.Sci.USA, 106, 2009
2KE3
DownloadVisualize
BU of 2ke3 by Molmil
PC1/3 DCSG sorting domain in CHAPS
Descriptor: Neuroendocrine convertase 1
Authors:Dikeakos, J.D, Di Lello, P, Lacombe, M.J, Ghirlando, R, Legault, P, Reudelhuber, T.L, Omichinski, J.G.
Deposit date:2009-01-22
Release date:2009-04-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Functional and structural characterization of a dense core secretory granule sorting domain from the PC1/3 protease
Proc.Natl.Acad.Sci.USA, 106, 2009
2I9S
DownloadVisualize
BU of 2i9s by Molmil
The solution structure of the core of mesoderm development (MESD).
Descriptor: Mesoderm development candidate 2
Authors:Koehler, C, Andersen, O, Diehl, A, Schmieder, P, Krause, G, Oschkinat, H.
Deposit date:2006-09-06
Release date:2007-05-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The solution structure of the core of mesoderm development (MESD), a chaperone for members of the LDLR-family
J.STRUCT.FUNCT.GENOM., 7, 2006
2KMN
DownloadVisualize
BU of 2kmn by Molmil
Solution structure of peptide deformylase complexed with actinonin
Descriptor: ACTINONIN, Peptide deformylase, ZINC ION
Authors:McElroy, C.A, Amero, C.D, Byerly, D.W, Foster, M.P.
Deposit date:2009-08-01
Release date:2009-08-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of Peptide Deformylase complexed with Actinonin
To be Published
2KR3
DownloadVisualize
BU of 2kr3 by Molmil
Solution structure of SHA-D
Descriptor: Spectrin alpha chain, brain
Authors:Khristoforov, V.S, Prokhorov, D.A, Timchenko, M.A, Kudrevatykh, Y.A, Gushchina, L.V, Filimonov, V.V, Kutyshenko, V.P.
Deposit date:2009-12-03
Release date:2010-09-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Chimeric SHA-D domain "SH3-Bergerac": 3D structure and dynamics studies
Russ.J.Bioorganic Chem., 36, 2010
2I9Y
DownloadVisualize
BU of 2i9y by Molmil
Solution structure of Arabidopsis thaliana protein At1g70830, a member of the major latex protein family
Descriptor: major latex protein-like protein 28 or MLP-like protein 28
Authors:Volkman, B.F, de la Cruz, N.B, Lytle, B.L, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-09-06
Release date:2006-09-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structures of two Arabidopsis thaliana major latex proteins represent novel helix-grip folds.
Proteins, 76, 2009
2KEJ
DownloadVisualize
BU of 2kej by Molmil
Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2
Descriptor: DNA (5'-D(*GP*AP*AP*AP*TP*GP*TP*GP*AP*GP*CP*GP*AP*GP*TP*AP*AP*CP*AP*AP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*TP*TP*GP*TP*TP*AP*CP*TP*CP*GP*CP*TP*CP*AP*CP*AP*TP*TP*TP*C)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KMD
DownloadVisualize
BU of 2kmd by Molmil
Ras signaling requires dynamic properties of Ets1 for phosphorylation-enhanced binding to co-activator CBP
Descriptor: Protein C-ets-1
Authors:Nelson, M.L, Kang, H, Lee, G.M, Blaszczak, A.G, Lau, D.K.W, McIntosh, L.P, Graves, B.J.
Deposit date:2009-07-27
Release date:2010-05-05
Last modified:2012-03-21
Method:SOLUTION NMR
Cite:Ras signaling requires dynamic properties of Ets1 for phosphorylation-enhanced binding to coactivator CBP.
Proc.Natl.Acad.Sci.USA, 107, 2010
2KTB
DownloadVisualize
BU of 2ktb by Molmil
Solution Structure of the Second Bromodomain of Human Polybromo in complex with an acetylated peptide from Histone 3
Descriptor: H3_Peptide, Protein polybromo-1
Authors:Charlop-Powers, Z, Zhang, Q, Zeng, L.
Deposit date:2010-01-26
Release date:2010-05-12
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structural insights into selective histone H3 recognition by the human Polybromo bromodomain 2.
Cell Res., 20, 2010

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon