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6P3B
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BU of 6p3b by Molmil
Crystal structure of the anti-HIV antibody DH501 unmutated common ancestor (UCA)
Descriptor: 1,2-ETHANEDIOL, DH501UCA Fab Heavy chain, DH501UCA Fab Light chain
Authors:Nicely, N.I, Saunders, K.O.
Deposit date:2019-05-23
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Cooperation between somatic mutation and germline-encoded residues enable antibody recognition of HIV-1 envelope glycans.
Plos Pathog., 15, 2019
4W9T
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BU of 4w9t by Molmil
Crystal structure of HisAP from Streptomyces sp. Mg1
Descriptor: Phosphoribosyl isomerase A, SULFATE ION
Authors:MICHALSKA, K, VERDUZCO-CASTRO, E.A, ENDRES, M, BARONA-GOMEZ, F, JOACHIMIAK, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-27
Release date:2014-09-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Co-occurrence of analogous enzymes determines evolution of a novel ( beta alpha )8-isomerase sub-family after non-conserved mutations in flexible loop.
Biochem. J., 473, 2016
8C9T
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BU of 8c9t by Molmil
Catechol O-methyltransferase from Streptomyces avermitilis
Descriptor: GLYCEROL, Putative O-methyltransferase
Authors:Zhang, L, Groves, M.R.
Deposit date:2023-01-23
Release date:2023-04-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Characterization and Extended Substrate Scope Analysis of Two Mg 2+ -Dependent O-Methyltransferases from Bacteria.
Chembiochem, 24, 2023
8C9V
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BU of 8c9v by Molmil
O-methyltransferase from Desulfuromonas acetoxidans
Descriptor: MAGNESIUM ION, O-methyltransferase, family 3
Authors:Zhang, L, Groves, M.R.
Deposit date:2023-01-23
Release date:2023-04-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Characterization and Extended Substrate Scope Analysis of Two Mg 2+ -Dependent O-Methyltransferases from Bacteria.
Chembiochem, 24, 2023
8CEQ
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BU of 8ceq by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO427
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-phenylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
Authors:Klima, M, Silhan, J, Boura, E.
Deposit date:2023-02-02
Release date:2023-04-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8CES
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BU of 8ces by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO500
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-[2-(1~{H}-benzimidazol-2-yl)ethynyl]pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
Authors:Klima, M, Silhan, J, Boura, E.
Deposit date:2023-02-02
Release date:2023-04-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
8CNY
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BU of 8cny by Molmil
Structure of Enterovirus A71 3C protease
Descriptor: Protease 3C
Authors:Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
Deposit date:2023-02-24
Release date:2023-04-05
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure of EV D68 3C protease - to be published
To Be Published
8C97
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BU of 8c97 by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L14, 50S ribosomal protein L17, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
8CET
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BU of 8cet by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with inhibitor TO507
Descriptor: (2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-quinolin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]butanoic acid, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase
Authors:Klima, M, Silhan, J, Boura, E.
Deposit date:2023-02-02
Release date:2023-04-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
5XN5
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BU of 5xn5 by Molmil
Homo-dimer crystal structure of geranylgeranyl diphosphate synthases 1 from Oryza sativa
Descriptor: Os07g0580900 protein
Authors:Wang, C, Zhou, F, Lu, S, Zhang, P.
Deposit date:2017-05-18
Release date:2017-06-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8C90
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BU of 8c90 by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
4US5
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BU of 4us5 by Molmil
Crystal Structure of apo-MsnO8
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Maier, S, Pflueger, T, Loesgen, S, Asmus, K, Broetz, E, Paululat, T, Zeeck, A, Andrade, S, Bechthold, A.
Deposit date:2014-07-03
Release date:2014-07-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights Into the Bioactivity of Mensacarcin and Epoxide Formation by Msno8.
Chembiochem, 15, 2014
8C8X
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BU of 8c8x by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
6ETG
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BU of 6etg by Molmil
Crystal structure of KDM4D with tetrazolhydrazide compound 6
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysine-specific demethylase 4D, ...
Authors:Malecki, P.H, Link, A, Weiss, M.S, Heinemann, U.
Deposit date:2017-10-26
Release date:2019-02-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.279 Å)
Cite:Structure-Based Screening of Tetrazolylhydrazide Inhibitors versus KDM4 Histone Demethylases.
Chemmedchem, 14, 2019
8CDP
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BU of 8cdp by Molmil
Cryo-EM structure of the RESC1-RESC2 complex
Descriptor: Guide_RNA_associated_protein_-_putative, Mitochondrial guide RNA binding complex subunit 2
Authors:Dolce, L.G, Weis, F, Kowalinski, E.
Deposit date:2023-01-31
Release date:2023-03-29
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for guide RNA selection by the RESC1-RESC2 complex.
Nucleic Acids Res., 51, 2023
6PL8
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BU of 6pl8 by Molmil
Structure of human DNA polymerase eta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP
Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(A38)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Koag, M.C, Lee, S.
Deposit date:2019-06-30
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of human DNA polymerase eta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP
To Be Published
8C18
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BU of 8c18 by Molmil
Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
Descriptor: ASTAXANTHIN, Astaxanthin binding fasciclin family protein
Authors:Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S.
Deposit date:2022-12-20
Release date:2023-04-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP.
Commun Biol, 6, 2023
8C8Z
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BU of 8c8z by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
8C95
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BU of 8c95 by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L15, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.92 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
8C9S
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BU of 8c9s by Molmil
Catechol O-methyltransferase from Streptomyces avermitilis in complex with SAH
Descriptor: MAGNESIUM ION, Putative O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, L, Groves, M.R.
Deposit date:2023-01-23
Release date:2023-04-05
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization and Extended Substrate Scope Analysis of Two Mg 2+ -Dependent O-Methyltransferases from Bacteria.
Chembiochem, 24, 2023
8C6O
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BU of 8c6o by Molmil
Crystal Structure of H64F obelin mutant from Obelia longissima at 2.2 Angstrom resolution
Descriptor: C2-HYDROPEROXY-COELENTERAZINE, Obelin, SODIUM ION
Authors:Natashin, P.V, Burakova, L.P, Kovaleva, M.I, Schevtsov, M.B, Dmitrieva, D.A, Eremeeva, E.V, Markova, S.V, Mishin, A.V, Borshchevskiy, V.I, Vysotski, E.S.
Deposit date:2023-01-12
Release date:2023-03-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Role of Tyr-His-Trp Triad and Water Molecule Near the N1-Atom of 2-Hydroperoxycoelenterazine in Bioluminescence of Hydromedusan Photoproteins: Structural and Mutagenesis Study.
Int J Mol Sci, 24, 2023
8C8Y
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BU of 8c8y by Molmil
Cryo-EM captures early ribosome assembly in action
Descriptor: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Lauer, S, Nikolay, R, Qin, B.
Deposit date:2023-01-21
Release date:2023-04-05
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Cryo-EM captures early ribosome assembly in action.
Nat Commun, 14, 2023
5XG7
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BU of 5xg7 by Molmil
Galectin-13/Placental Protein 13 crystal structure
Descriptor: Galactoside-binding soluble lectin 13
Authors:Su, J.Y, Wang, Y.
Deposit date:2017-04-12
Release date:2018-01-31
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Galectin-13, a different prototype galectin, does not bind beta-galacto-sides and forms dimers via intermolecular disulfide bridges between Cys-136 and Cys-138
Sci Rep, 8, 2018
8C5P
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BU of 8c5p by Molmil
E. coli NfsB mutant N71S T41L with acetate
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:Day, M.A, White, S.A, Hyde, E.I.
Deposit date:2023-01-10
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure and Dynamics of Three Escherichia coli NfsB Nitro-Reductase Mutants Selected for Enhanced Activity with the Cancer Prodrug CB1954.
Int J Mol Sci, 24, 2023
8CCV
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BU of 8ccv by Molmil
E. coli NfsB mutant T41LN71S with nicotinate
Descriptor: FLAVIN MONONUCLEOTIDE, NICOTINIC ACID, Oxygen-insensitive NAD(P)H nitroreductase
Authors:Day, M.A, White, S.A, Hyde, E.I, Searle, P.F.
Deposit date:2023-01-27
Release date:2023-04-19
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and Dynamics of Three Escherichia coli NfsB Nitro-Reductase Mutants Selected for Enhanced Activity with the Cancer Prodrug CB1954.
Int J Mol Sci, 24, 2023

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PDB entries from 2024-08-07

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