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8OI2
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BU of 8oi2 by Molmil
Crystal structure of Alb1 megabody in complex with human serum albumin
Descriptor: Alb1 Megabody, Albumin
Authors:De Felice, S, Zoia, G, Romanyuk, Z, Pardon, E, Steyaert, J, Angelini, A, Cendron, L.
Deposit date:2023-03-22
Release date:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal structure of human serum albumin in complex with megabody reveals unique human and murine cross-reactive binding site.
Protein Sci., 33, 2024
6GOU
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BU of 6gou by Molmil
Development of Alkyl Glycerone Phosphate Synthase Inhibitors: Complex with Inhibitor 2I
Descriptor: (3~{S})-3-[2,6-bis(fluoranyl)phenyl]-~{N}-[(2-oxidanylidene-1,3-dihydrobenzimidazol-5-yl)methyl]butanamide, Alkyldihydroxyacetonephosphate synthase, peroxisomal, ...
Authors:Mattevi, A, Piano, V.
Deposit date:2018-06-04
Release date:2019-01-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Development of alkyl glycerone phosphate synthase inhibitors: Structure-activity relationship and effects on ether lipids and epithelial-mesenchymal transition in cancer cells.
Eur J Med Chem, 163, 2018
4W5A
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BU of 4w5a by Molmil
Complex structure of ATRX ADD bound to H3K9me3S10ph peptide
Descriptor: Peptide from Histone H3.3, Transcriptional regulator ATRX, ZINC ION
Authors:Zhao, D, Xiang, B, Li, H.
Deposit date:2014-08-17
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:ATRX tolerates activity-dependent histone H3 methyl/phos switching to maintain repetitive element silencing in neurons
Proc.Natl.Acad.Sci.USA, 112, 2015
1CIS
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BU of 1cis by Molmil
CONTEXT DEPENDENCE OF PROTEIN SECONDARY STRUCTURE FORMATION. THE THREE-DIMENSIONAL STRUCTURE AND STABILITY OF A HYBRID BETWEEN CHYMOTRYPSIN INHIBITOR 2 AND HELIX E FROM SUBTILISIN CARLSBERG
Descriptor: HYBRID PROTEIN FORMED FROM CHYMOTRYPSIN INHIBITOR-2
Authors:Osmark, P, Sorensen, P, Poulsen, F.M.
Deposit date:1993-04-23
Release date:1993-10-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Context dependence of protein secondary structure formation: the three-dimensional structure and stability of a hybrid between chymotrypsin inhibitor 2 and helix E from subtilisin Carlsberg.
Biochemistry, 32, 1993
4USF
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BU of 4usf by Molmil
Human SLK with SB-440719
Descriptor: 4-[4-(6-methoxynaphthalen-2-yl)-1H-imidazol-5-yl]pyridine, STE20-LIKE SERINE/THREONINE-PROTEIN KINASE
Authors:Elkins, J.M, Salah, E, Szklarz, M, von Delft, F, Bountra, C, Edwards, A.M, Knapp, S.
Deposit date:2014-07-07
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Comprehensive Characterization of the Published Kinase Inhibitor Set.
Nat.Biotechnol., 34, 2016
6GVY
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BU of 6gvy by Molmil
Mutant M16A of RNA dependent RNA polymerase 3D from Foot-and-Mouth disease Virus complexed with an template -primer RNA
Descriptor: GLYCEROL, Genome polyprotein, RNA (5'-R(P*CP*CP*GP*GP*G)-3'), ...
Authors:Verdaguer, N, Ferrer-Orta, C.
Deposit date:2018-06-21
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Contribution of a Multifunctional Polymerase Region of Foot-and-Mouth Disease Virus to Lethal Mutagenesis.
J. Virol., 92, 2018
6GP5
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BU of 6gp5 by Molmil
Beta-1,4-galactanase from Bacteroides thetaiotaomicron
Descriptor: Arabinogalactan endo-beta-1,4-galactanase
Authors:Hekelaar, J, Boger, M, Leeuwen van, S.S, Lammerts van Bueren, A, Dijkhuizen, L.
Deposit date:2018-06-05
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and functional characterization of a family GH53 beta-1,4-galactanase from Bacteroides thetaiotaomicron that facilitates degradation of prebiotic galactooligosaccharides.
J. Struct. Biol., 205, 2019
8P2Q
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BU of 8p2q by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-OH
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Alsalman, Z, Girard, E.
Deposit date:2023-05-16
Release date:2024-06-05
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
6GPA
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BU of 6gpa by Molmil
Beta-1,4-galactanase from Bacteroides thetaiotaomicron with galactose
Descriptor: Arabinogalactan endo-beta-1,4-galactanase, beta-D-galactopyranose
Authors:Hekelaar, J, Boger, M, Leeuwen van, S.S, Lammerts van Bueren, A, Dijkhuizen, L.
Deposit date:2018-06-05
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural and functional characterization of a family GH53 beta-1,4-galactanase from Bacteroides thetaiotaomicron that facilitates degradation of prebiotic galactooligosaccharides.
J. Struct. Biol., 205, 2019
7QLK
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BU of 7qlk by Molmil
Cis structure intermediate of rsKiiro Illuminated at 200 K
Descriptor: GLYCEROL, SULFATE ION, rsKiiro
Authors:van Thor, J.J, Baxter, J.M.
Deposit date:2021-12-20
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.458 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
4WB5
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BU of 4wb5 by Molmil
Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PKI (5-24), ...
Authors:Cheung, J, Ginter, C, Cassidy, M, Franklin, M.C, Rudolph, M.J, Hendrickson, W.A.
Deposit date:2014-09-02
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Structural insights into mis-regulation of protein kinase A in human tumors.
Proc.Natl.Acad.Sci.USA, 112, 2015
7Q8T
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BU of 7q8t by Molmil
Crystal structure of NAMPT bound to ligand TSY535(compound 9a)
Descriptor: Nicotinamide phosphoribosyltransferase, SULFATE ION, [(2~{R},3~{S},4~{R},5~{S})-3,4-bis(oxidanyl)-5-[4-[[[4-(phenylsulfonyl)phenyl]carbamoylamino]methyl]phenyl]oxolan-2-yl]methyl dihydrogen phosphate
Authors:Kraemer, A, Tang, S, Butterworth, S, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-11-11
Release date:2021-11-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Chemistry-led investigations into the mode of action of NAMPT activators, resulting in the discovery of non-pyridyl class NAMPT activators.
Acta Pharm Sin B, 13, 2023
7QLL
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BU of 7qll by Molmil
rsKiiro Thermal annealing at 290K of 200K Cis intermediate
Descriptor: GLYCEROL, SULFATE ION, rsKiiro
Authors:van Thor, J.J, Baxter, J.M.
Deposit date:2021-12-20
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.324 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
7QLI
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BU of 7qli by Molmil
Cis structure of rsKiiro at 290 K
Descriptor: GLYCEROL, SULFATE ION, rsKiiro
Authors:van Thor, J.J, Baxter, J.M.
Deposit date:2021-12-20
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.155 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
5L8P
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BU of 5l8p by Molmil
Thermolysin in complex with JC114 (PEG400 cryo protectant)
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2S)-2,3,3-trimethylbutyl]-L-leucinamide, ...
Authors:Krimmer, S.G, Cramer, J, Heine, A, Klebe, G.
Deposit date:2016-06-08
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands.
J. Med. Chem., 59, 2016
7QG7
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BU of 7qg7 by Molmil
SARS-CoV-2 macrodomain Nsp3b bound to the remdesivir nucleoside GS-441524
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,1-f][1,2,4]triazin-7-yl)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolane-2-carbonitrile, 1,2-ETHANEDIOL, Papain-like protease nsp3
Authors:Wollenhaupt, J, Linhard, V, Sreeramulu, S, Weiss, M.S, Schwalbe, H.
Deposit date:2021-12-07
Release date:2021-12-15
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Binding Adaptation of GS-441524 Diversifies Macro Domains and Downregulates SARS-CoV-2 de-MARylation Capacity.
J.Mol.Biol., 434, 2022
8PHY
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BU of 8phy by Molmil
crystal structure of powdery mildews Blumeria graminis f. sp. tritici AVRPM2 (2)
Descriptor: BgtE-5845_p
Authors:Cao, Y, Gebauer, J.M, Baumann, U, Chai, J.J.
Deposit date:2023-06-20
Release date:2023-08-16
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Structural polymorphisms within a common powdery mildew effector scaffold as a driver of coevolution with cereal immune receptors.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PFI
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BU of 8pfi by Molmil
Crystal structure of human TLR8 in complex with compound 34
Descriptor: (3~{S})-~{N}-[4-[[5-(1,6-dimethylpyrazolo[3,4-b]pyridin-4-yl)-3-methyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-1-yl]methyl]-1-bicyclo[2.2.2]octanyl]morpholine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
Authors:Faller, M, Zink, F.
Deposit date:2023-06-16
Release date:2023-08-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.785 Å)
Cite:Discovery of the TLR7/8 Antagonist MHV370 for Treatment of Systemic Autoimmune Diseases.
Acs Med.Chem.Lett., 14, 2023
4UWB
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BU of 4uwb by Molmil
Fibroblast growth factor receptor 1 kinase in complex with JK-P5
Descriptor: 1,2-ETHANEDIOL, FIBROBLAST GROWTH FACTOR RECEPTOR 1, N-[4-(4-methylpiperazin-1-yl)phenyl]-1H-indazole-3-carboxamide, ...
Authors:Beeston, H, Tucker, J, Kankanala, J.
Deposit date:2014-08-11
Release date:2015-09-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Validation of IMS-MS as a screening tool to identify type II kinase inhibitors of FGFR1 kinase.
Rapid Commun Mass Spectrom, 2021
4UWC
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BU of 4uwc by Molmil
Fibroblast growth factor receptor 1 kinase in complex with JK-P3
Descriptor: 1,2-ETHANEDIOL, 3,4-dimethoxy-N-(5-phenyl-1H-pyrazol-3-yl)benzamide, FIBROBLAST GROWTH FACTOR RECEPTOR 1, ...
Authors:Beeston, H, Tucker, J, Kankanala, J.
Deposit date:2014-08-11
Release date:2015-09-02
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Validation of IMS-MS as a screening tool to identify type II kinase inhibitors of FGFR1 kinase.
Rapid Commun Mass Spectrom, 2021
8Q3U
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BU of 8q3u by Molmil
Crystal structure of a fentanyl derivative in complex with human CA VII
Descriptor: Carbonic anhydrase 7, GLYCEROL, ZINC ION, ...
Authors:Alterio, V, Di Fiore, A, De Simone, G.
Deposit date:2023-08-04
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Discovery of a novel series of potent carbonic anhydrase inhibitors with selective affinity for mu Opioid receptor for Safer and long-lasting analgesia.
Eur.J.Med.Chem., 260, 2023
7QA4
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BU of 7qa4 by Molmil
Crystal structure of stabilized H3N2 A/Hong Kong/1/1968 Hemagglutinin at 2.2 Angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Milder, F.J, Langedijk, J.P.M.
Deposit date:2021-11-16
Release date:2022-02-02
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Universal stabilization of the influenza hemagglutinin by structure-based redesign of the pH switch regions.
Proc.Natl.Acad.Sci.USA, 119, 2022
6RC9
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BU of 6rc9 by Molmil
P1 Mycoplasma pneumoniae
Descriptor: Adhesin P1
Authors:Vizarraga, D, Aparicio, D, Illanes, R, Fita, I.
Deposit date:2019-04-11
Release date:2020-11-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Immunodominant proteins P1 and P40/P90 from human pathogen Mycoplasma pneumoniae.
Nat Commun, 11, 2020
8ETN
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BU of 8etn by Molmil
The X-ray Crystal Structure of Tri-Ketone Dioxygenase from Rice
Descriptor: Tri-Ketone Dioxygenase
Authors:Rydel, T.J, Duda, D, Zheng, M, Duff, S.M.G.
Deposit date:2022-10-17
Release date:2023-12-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structural and functional characterization of triketone dioxygenase from Oryza Sativa.
Biochim Biophys Acta Gen Subj, 1868, 2023
5L3U
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BU of 5l3u by Molmil
Thermolysin in complex with JC149 (MPD cryo protectant)
Descriptor: CALCIUM ION, DIMETHYL SULFOXIDE, N~2~-[(R)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-N-[(2R)-2,3,3-trimethylbutyl]-L-leucinamide, ...
Authors:Krimmer, S.G, Cramer, J, Heine, A, Klebe, G.
Deposit date:2016-05-24
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Rational Design of Thermodynamic and Kinetic Binding Profiles by Optimizing Surface Water Networks Coating Protein-Bound Ligands.
J. Med. Chem., 59, 2016

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