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2EIO	Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts Descriptor: Thioredoxin 1 Authors: Kobayashi, M. Deposit date: 2007-03-13 Release date: 2007-09-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts J.Mol.Biol., 372, 2007
2EIQ	Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Thioredoxin 1 Authors: Kobayashi, M. Deposit date: 2007-03-13 Release date: 2007-09-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts J.Mol.Biol., 372, 2007
6XAR	Structure of CBL tyrosine kinase binding domain (TKBD) with C-terminal tail of Src-like kinase protein 2 (SLAP2) Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase CBL, Src-like-adapter 2 Authors: Wybenga-Groot, L.E, McGlade, C.J. Deposit date: 2020-06-04 Release date: 2021-03-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.501 Å) Cite: SLAP2 Adaptor Binding Disrupts c-CBL Autoinhibition to Activate Ubiquitin Ligase Function. J.Mol.Biol., 433, 2021
7OOL	Crystal structure of a Candidatus photodesmus katoptron thioredoxin chimera containing an ancestral loop Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Gavira, J.A, Ibarra-Molero, B, Gamiz-Arco, G, Risso, V, Sanchez-Ruiz, J.M. Deposit date: 2021-05-28 Release date: 2021-11-10 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Combining Ancestral Reconstruction with Folding-Landscape Simulations to Engineer Heterologous Protein Expression. J.Mol.Biol., 433, 2021
5EZU	Crystal structure of the N-terminal domain of vaccinia virus immunomodulator A46 in complex with myristic acid. Descriptor: MYRISTIC ACID, Protein A46 Authors: Fedosyuk, S, Bezerra, G.A, Sammito, M, Uson, I, Skern, T. Deposit date: 2015-11-26 Release date: 2016-11-30 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Vaccinia Virus Immunomodulator A46: A Lipid and Protein-Binding Scaffold for Sequestering Host TIR-Domain Proteins. PLoS Pathog., 12, 2016
6N9V	Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS1) Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, MAGNESIUM ION, ... Authors: Gao, Y, Fox, T, Val, N, Yang, W. Deposit date: 2018-12-04 Release date: 2019-03-06 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structures and operating principles of the replisome. Science, 363, 2019
6N9U	Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) interacting with primase domains of two gp4 subunits bound to an RNA/DNA hybrid and dTTP (from LagS1) Descriptor: DNA (44-MER), DNA primase/helicase, DNA-directed DNA polymerase, ... Authors: Gao, Y, Fox, T, Val, N, Yang, W. Deposit date: 2018-12-04 Release date: 2019-03-06 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Structures and operating principles of the replisome. Science, 363, 2019
6N9X	Structure of bacteriophage T7 lagging-strand DNA polymerase (D5A/E7A) and gp4 (helicase/primase) bound to DNA including RNA/DNA hybrid, and an incoming dTTP (LagS3) Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, MAGNESIUM ION, ... Authors: Gao, Y, Fox, T, Val, N, Yang, W. Deposit date: 2018-12-04 Release date: 2019-03-06 Last modified: 2019-12-18 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structures and operating principles of the replisome. Science, 363, 2019
1TKD	T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*CP*CP*CP*AP*(8OG)P*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3'), ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-08 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
6TRV	Structure of SapL1 lectin in complex with alpha methyl fucoside Descriptor: GLYCEROL, SULFATE ION, Uncharacterized protein, ... Authors: Martinez Alarcon, D, Varrot, A. Deposit date: 2019-12-19 Release date: 2020-12-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Biochemical and structural studies of target lectin SapL1 from the emerging opportunistic microfungus Scedosporium apiospermum. Sci Rep, 11, 2021
1TK8	T7 DNA polymerase ternary complex with 8 oxo guanosine and dAMP at the elongation site Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*AP*(8OG)P*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-08 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
1TK5	T7 DNA polymerase binary complex with 8 oxo guanosine in the templating strand Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*A*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(DDG)P*TP*GP*CP*AP*A)-3', ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-08 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
1TK0	T7 DNA polymerase ternary complex with 8 oxo guanosine and ddCTP at the insertion site Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-07 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
2EIR	Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts Descriptor: COPPER (II) ION, Thioredoxin 1 Authors: Kobayashi, M. Deposit date: 2007-03-13 Release date: 2007-09-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts J.Mol.Biol., 372, 2007
3DYR	Crystal structure of E. coli thioredoxin mutant I76T in its oxidized form Descriptor: Thioredoxin-1 Authors: Ren, G, Bardwell, J.C.A, Xu, Z. Deposit date: 2008-07-28 Release date: 2009-01-27 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Properties of the thioredoxin fold superfamily are modulated by a single amino acid residue. J.Biol.Chem., 284, 2009
5IKN	Crystal Structure of the T7 Replisome in the Absence of DNA Descriptor: DNA primase/helicase, DNA-directed DNA polymerase, Thioredoxin-1 Authors: Wallen, J.R, Ellenberger, T. Deposit date: 2016-03-03 Release date: 2016-12-07 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (4.802 Å) Cite: Hybrid Methods Reveal Multiple Flexibly Linked DNA Polymerases within the Bacteriophage T7 Replisome. Structure, 25, 2017
3N3F	Crystal Structure of the Human Collagen XV Trimerization Domain: A Potent Trimerizing Unit Common to Multiplexin Collagens Descriptor: Collagen alpha-1(XV) chain Authors: Wirz, J.A. Deposit date: 2010-05-19 Release date: 2010-10-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.005 Å) Cite: Crystal structure of the human collagen XV trimerization domain: A potent trimerizing unit common to multiplexin collagens. Matrix Biol., 30, 2011
3AQX	Crystal structure of Bombyx mori beta-GRP/GNBP3 N-terminal domain with laminarihexaoses Descriptor: Beta-1,3-glucan-binding protein, GLYCEROL, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
3AQZ	Crystal structure of Plodia interpunctella beta-GRP/GNBP3 N-terminal domain with laminarihexaoses Descriptor: Beta-1,3-glucan-binding protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
3AQY	Crystal structure of Plodia interpunctella beta-GRP/GNBP3 N-terminal domain Descriptor: Beta-1,3-glucan-binding protein Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
7JST	Crystal structure of SARS-CoV-2 3CL in apo form Descriptor: 3C-like proteinase, PHOSPHATE ION Authors: Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D. Deposit date: 2020-08-16 Release date: 2021-03-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors. Nat Commun, 12, 2021
6GD1	Structure of HuR RRM3 Descriptor: SODIUM ION, Thioredoxin 1,ELAV-like protein 1 Authors: Pabis, M, Sattler, M. Deposit date: 2018-04-21 Release date: 2018-10-31 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.01 Å) Cite: HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs. Nucleic Acids Res., 47, 2019
9B1R	Functional implication of the homotrimeric multidomain vacuolar sorting receptor 1 from Arabidopsis thaliana Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Vacuolar-sorting receptor 1 Authors: Park, H, Youn, B, Park, D.J, Puthanveettil, S.V, Kang, C. Deposit date: 2024-03-13 Release date: 2024-05-15 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Functional implication of the homotrimeric multidomain vacuolar sorting receptor 1 (VSR1) from Arabidopsis thaliana. Sci Rep, 14, 2024
7V8H	Crystal structure of LRR domain from Shigella flexneri IpaH1.4 Descriptor: RING-type E3 ubiquitin transferase Authors: Liu, J, Wang, Y, Pan, L. Deposit date: 2021-08-23 Release date: 2022-03-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.46 Å) Cite: Mechanistic insights into the subversion of the linear ubiquitin chain assembly complex by the E3 ligase IpaH1.4 of Shigella flexneri. Proc.Natl.Acad.Sci.USA, 119, 2022
4E8H	Structural of Bombyx mori glutathione transferase BmGSTD1 complex with GTT Descriptor: GLUTATHIONE, Glutathione S-transferase Authors: Tan, X, Ma, X.X, Hu, X.M, Chen, Q.M, Zhao, P, Xia, Q.Y, Zhou, C.Z. Deposit date: 2012-03-20 Release date: 2013-04-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Structural of Bombyx mori glutathione transferase BmGSTD1 complex with GTT To be Published

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