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6BIT
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BU of 6bit by Molmil
SIRPalpha antibody complex
Descriptor: KWAR23 Fab heavy chain, KWAR23 Fab light chain, Tyrosine-protein phosphatase non-receptor type substrate 1
Authors:Ring, N.G, Herndler-Brandstetter, D, Weiskopf, K, Shan, L, Volkmer, J.P, George, B.M, Lietzenmayer, M, McKenna, K.M, Naik, T.J, McCarty, A, Zheng, Y, Ring, A.M, Flavell, R.A, Weissman, I.L.
Deposit date:2017-11-03
Release date:2017-12-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Anti-SIRP alpha antibody immunotherapy enhances neutrophil and macrophage antitumor activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7M3S
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BU of 7m3s by Molmil
The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.55 Angstrom resolution. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring
Descriptor: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, CHLORIDE ION, ...
Authors:Hilario, E, Dunn, M.F, Mueller, L.J.
Deposit date:2021-03-18
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.55 Angstrom resolution. One of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring.
To be Published
7M2L
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BU of 7m2l by Molmil
The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.60 Angstrom resolution. Two of the beta-Q114 rotamer conformations allows a hydrogen bond to form with the PLP oxygen at the position 3 in the ring
Descriptor: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, CHLORIDE ION, ...
Authors:Hilario, E, Dunn, M.F, Mueller, L.J.
Deposit date:2021-03-16
Release date:2021-09-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The internal aldimine form of the wild-type Salmonella Typhimurium Tryptophan Synthase in complex with N-(4'-trifluoromethoxybenzoyl)-2-amino-1-ethylphosphate (F6F) inhibitor at the alpha-and beta-site, sodium ion at the metal coordination site, and another F6F molecule at the enzyme beta-site at 1.60 Angstrom resolution.
To be Published
6XRN
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BU of 6xrn by Molmil
Crystal structure of human PI3K-gamma in complex with Compound 17
Descriptor: 2-amino-5-{2-[(1S)-1-cyclopropylethyl]-7-methyl-1-oxo-2,3-dihydro-1H-isoindol-5-yl}-N-(trans-3-hydroxycyclobutyl)pyrazolo[1,5-a]pyrimidine-3-carboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Walker, N.P, Jeffrey, J.L.
Deposit date:2020-07-13
Release date:2021-11-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Design, Synthesis, and Structure-Activity Relationship Optimization of Pyrazolopyrimidine Amide Inhibitors of Phosphoinositide 3-Kinase gamma (PI3K gamma ).
J.Med.Chem., 65, 2022
6GP9
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BU of 6gp9 by Molmil
Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a
Descriptor: RNA-directed RNA polymerase
Authors:Janowski, R, Geber, H, Protzer, U, Niessing, D.
Deposit date:2018-06-05
Release date:2020-09-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural studies of hepatitis C virus non-structural protein-5b of genotype 4a
Biorxiv, 2022
4NWD
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BU of 4nwd by Molmil
Crystal structure of the kainate receptor GluK3 ligand-binding domain in complex with the agonist (2S,4R)-4-(3-Methylamino-3-oxopropyl)glutamic acid at 2.6 A resolution
Descriptor: (4R)-4-[3-(methylamino)-3-oxopropyl]-L-glutamic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
Authors:Venskutonyte, R, Larsen, A.P, Frydenvang, K, Gajhede, M, Kastrup, J.S.
Deposit date:2013-12-06
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular Recognition of Two 2,4-syn-Functionalized (S)-Glutamate Analogues by the Kainate Receptor GluK3 Ligand Binding Domain.
Chemmedchem, 9, 2014
4NWC
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BU of 4nwc by Molmil
Crystal structure of the GluK3 ligand-binding domain (S1S2) in complex with the agonist (2S,4R)-4-(3-Methoxy-3-oxopropyl)glutamic acid at 2.01 A resolution.
Descriptor: (2S,4R)-4-(3-Methoxy-3-oxopropyl) glutamic acid, CHLORIDE ION, Glutamate receptor ionotropic, ...
Authors:Larsen, A.P, Venskutonyte, R, Frydenvang, K, Gajhede, M, Kastrup, J.S.
Deposit date:2013-12-06
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.012 Å)
Cite:Molecular Recognition of Two 2,4-syn-Functionalized (S)-Glutamate Analogues by the Kainate Receptor GluK3 Ligand Binding Domain.
Chemmedchem, 9, 2014
3DVQ
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BU of 3dvq by Molmil
Proteinase K by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-20
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DW1
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BU of 3dw1 by Molmil
Proteinase K by LB nanotemplate method after the third step high X-Ray dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-21
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
6DVK
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BU of 6dvk by Molmil
Computationally designed mini tetraloop-tetraloop receptor by the RNAMake program - construct 6 (miniTTR 6)
Descriptor: COBALT (II) ION, MAGNESIUM ION, RNA (95-MER)
Authors:Eiler, D.R, Yesselman, J.D, Costantino, D.A, Das, R, Kieft, J.S.
Deposit date:2018-06-24
Release date:2019-06-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Computational design of three-dimensional RNA structure and function.
Nat Nanotechnol, 14, 2019
4YOI
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BU of 4yoi by Molmil
Structure of HKU4 3CLpro bound to non-covalent inhibitor 1A
Descriptor: 3C-like proteinase, ACETATE ION, FORMIC ACID, ...
Authors:St John, S.E, Mesecar, A.
Deposit date:2015-03-11
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Targeting zoonotic viruses: Structure-based inhibition of the 3C-like protease from bat coronavirus HKU4-The likely reservoir host to the human coronavirus that causes Middle East Respiratory Syndrome (MERS).
Bioorg.Med.Chem., 23, 2015
6I5V
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BU of 6i5v by Molmil
BlMnBP1 binding protein of an ABC transporter from Bifidobacterium animalis subsp. lactis ATCC27673 in complex with mannotriose
Descriptor: Solute Binding Protein, BlMnBP1 in complex with mannotrisoe, ZINC ION, ...
Authors:Abou Hachem, M, Ejby, M, Guskov, A, Slotboom, D.J.
Deposit date:2018-11-14
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Two binding proteins of the ABC transporter that confers growth of Bifidobacterium animalis subsp. lactis ATCC27673 on beta-mannan possess distinct manno-oligosaccharide-binding profiles.
Mol.Microbiol., 112, 2019
3OPH
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BU of 3oph by Molmil
ESBL R164S mutant of SHV-1 beta-lactamase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-lactamase SHV-1, CYCLOHEXYL-HEXYL-BETA-D-MALTOSIDE
Authors:Sampson, J.M, van den Akker, F.
Deposit date:2010-09-01
Release date:2011-07-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Ligand-dependent disorder of the Omega loop observed in extended-spectrum SHV-type beta-lactamase.
Antimicrob.Agents Chemother., 55, 2011
3DO2
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BU of 3do2 by Molmil
Thermolysin by LB nanotemplate method after high X-Ray dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-03
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
4YO9
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BU of 4yo9 by Molmil
HKU4 3CLpro unbound structure
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3C-like proteinase, ACETATE ION, ...
Authors:St John, S.E, Mesecar, A.
Deposit date:2015-03-11
Release date:2015-08-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Targeting zoonotic viruses: Structure-based inhibition of the 3C-like protease from bat coronavirus HKU4-The likely reservoir host to the human coronavirus that causes Middle East Respiratory Syndrome (MERS).
Bioorg.Med.Chem., 23, 2015
3UAG
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BU of 3uag by Molmil
UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Bertrand, J.A, Auger, G, Martin, L, Fanchon, E, Blanot, D, Le Beller, D, Van Heijenoort, J, Dideberg, O.
Deposit date:1999-02-24
Release date:2000-02-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Determination of the MurD mechanism through crystallographic analysis of enzyme complexes.
J.Mol.Biol., 289, 1999
5DL9
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BU of 5dl9 by Molmil
Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, IODIDE ION, ...
Authors:Bednarski, R, Cirricione, N, Greco, A, Hodgson, R, Kent, S, McGowan, J, Notherm, B, Patt, M, Vue, L, Bianchetti, C.M.
Deposit date:2015-09-04
Release date:2015-09-16
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
To Be Published
5DLA
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BU of 5dla by Molmil
Structure of Tetragonal Lysozyme solved by UWO Students
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
Authors:Bednarski, R, Cirricione, N, Greco, A, Hodgson, R, Kent, S, McGowan, J, Notherm, B, Patt, M, Vue, L, Bianchetti, C.M.
Deposit date:2015-09-04
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Structure of Tetragonal Lysozyme in complex with Iodine solved by UWO Students
To Be Published
2PNC
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BU of 2pnc by Molmil
Crystal Structure of Bovine Plasma Copper-Containing Amine Oxidase in Complex with Clonidine
Descriptor: 2,6-DICHLORO-N-IMIDAZOLIDIN-2-YLIDENEANILINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Cendron, L, Holt, A, Smith, D.J, Zanotti, G, Rigo, A, Di Paolo, M.L.
Deposit date:2007-04-24
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multiple binding sites for substrates and modulators of semicarbazide-sensitive amine oxidases: kinetic consequences
Mol.Pharmacol., 73, 2008
4OJF
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BU of 4ojf by Molmil
Humanised 3D6 Fab complexed to amyloid beta 1-8
Descriptor: Amyloid beta A4 protein, Humanised 3D6 Fab Heavy Chain, Humanised 3D6 Fab Light Chain
Authors:Miles, L.A, Crespi, G.A.N, Parker, M.W.
Deposit date:2014-01-21
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Crystallization and preliminary X-ray diffraction analysis of the Fab portion of the Alzheimer's disease immunotherapy candidate bapineuzumab complexed with amyloid-beta
ACTA CRYSTALLOGR.,SECT.F, 70, 2014
3DNZ
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BU of 3dnz by Molmil
Thermolysin by LB nanotemplate method before high X-Ray dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, LYSINE, Thermolysin, ...
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-03
Release date:2009-07-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DVS
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BU of 3dvs by Molmil
Proteinase K by LB nanotmplate method after the second step of high dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-20
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
3DVR
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BU of 3dvr by Molmil
Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID14-2 beamline
Descriptor: CALCIUM ION, Proteinase K
Authors:Pechkova, E, Tripathi, S.K, Nicolini, C.
Deposit date:2008-07-20
Release date:2009-07-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective
To be Published
2GCP
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BU of 2gcp by Molmil
Crystal structure of the human RhoC-GSP complex
Descriptor: 1,2-ETHANEDIOL, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, ...
Authors:Dias, S.M.G, Cerione, R.A.
Deposit date:2006-03-14
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray Crystal Structures Reveal Two Activated States for RhoC.
Biochemistry, 46, 2007
4GA3
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BU of 4ga3 by Molmil
Crystal Structure of Human Farnesyl Diphosphate Synthase in Complex with BPH-1260
Descriptor: 1-butyl-3-(2-hydroxy-2,2-diphosphonoethyl)-1H-imidazol-3-ium, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ...
Authors:Liu, Y.-L, Zhang, Y, Oldfield, E.
Deposit date:2012-07-24
Release date:2013-05-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Chemo-Immunotherapeutic Anti-Malarials Targeting Isoprenoid Biosynthesis.
ACS MED.CHEM.LETT., 4, 2013

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