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8R5O
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BU of 8r5o by Molmil
Plastid-encoded RNA polymerase
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Webster, M.W, Pramanick, I, Vergara-Cruces, A.
Deposit date:2023-11-17
Release date:2024-03-13
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Structure of the plant plastid-encoded RNA polymerase.
Cell, 187, 2024
6NH2
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BU of 6nh2 by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with (R)-6-(3-fluoro-5-(2-(pyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, 6-[2-(3-fluoro-5-{2-[(2R)-pyrrolidin-2-yl]ethyl}phenyl)ethyl]-4-methylpyridin-2-amine, ...
Authors:Chreifi, G, Li, H, Poulos, T.L.
Deposit date:2018-12-21
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold.
J. Med. Chem., 62, 2019
8QOA
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BU of 8qoa by Molmil
Structure of SecM-stalled Escherichia coli 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S16, ...
Authors:Gersteuer, F, Morici, M, Wilson, D.N.
Deposit date:2023-09-28
Release date:2024-03-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2 Å)
Cite:The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome.
Nat Commun, 15, 2024
7RCU
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BU of 7rcu by Molmil
Synthetic Max homodimer mimic in complex with DNA
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, 2-(2,5-dioxopyrrolidin-1-yl)acetamide, ACETAMIDE, ...
Authors:Speltz, T, Qiao, Z, Shangguan, S, Fanning, S, Greene, J, Moellering, R.
Deposit date:2021-07-08
Release date:2022-09-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Targeting MYC with modular synthetic transcriptional repressors derived from bHLH DNA-binding domains.
Nat.Biotechnol., 41, 2023
8RCL
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BU of 8rcl by Molmil
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Fluegel, T, Schacherl, M.
Deposit date:2023-12-06
Release date:2024-03-13
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
7R3B
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BU of 7r3b by Molmil
S-adenosylmethionine synthetase from Lactobacillus plantarum complexed with AMPPNP, methionine and SAM
Descriptor: (DIPHOSPHONO)AMINOPHOSPHONIC ACID, MAGNESIUM ION, PHENYLALANINE, ...
Authors:Shahar, A, Kleiner, D, Bershtein, S, Zarivach, R.
Deposit date:2022-02-07
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Evolution of homo-oligomerization of methionine S-adenosyltransferases is replete with structure-function constrains.
Protein Sci., 31, 2022
5E23
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BU of 5e23 by Molmil
Human transthyretin (TTR) complexed with (2,7-Dibromo-fluoren-9-ylideneaminooxy)-acetic acid
Descriptor: DIMETHYL SULFOXIDE, Transthyretin, {[(2,7-dibromo-9H-fluoren-9-ylidene)amino]oxy}acetic acid
Authors:Ciccone, L, Nencetti, S, Rossello, A, Orlandini, E, Stura, E.A.
Deposit date:2015-09-30
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Synthesis and structural analysis of halogen substituted fibril formation inhibitors of Human Transthyretin (TTR).
J Enzyme Inhib Med Chem, 31, 2016
1DUH
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BU of 1duh by Molmil
CRYSTAL STRUCTURE OF THE CONSERVED DOMAIN IV OF E. COLI 4.5S RNA
Descriptor: 4.5S RNA DOMAIN IV, LUTETIUM (III) ION, MAGNESIUM ION, ...
Authors:Jovine, L, Hainzl, T, Oubridge, C, Scott, W.G, Li, J, Sixma, T.K, Wonacott, A, Skarzynski, T, Nagai, K.
Deposit date:2000-01-17
Release date:2000-05-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the ffh and EF-G binding sites in the conserved domain IV of Escherichia coli 4.5S RNA.
Structure Fold.Des., 8, 2000
8F67
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BU of 8f67 by Molmil
Crystal structure of the refolded Penicillin Binding Protein 5 (PBP5) of Enterococcus faecium
Descriptor: Pbp5, SULFATE ION
Authors:D'Andrea, E.D, Schoenle, M.V, Choy, M.S, Peti, W, Page, R.
Deposit date:2022-11-16
Release date:2023-07-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam Antibiotics
Nat Commun, 2023
5E2B
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BU of 5e2b by Molmil
Crystal structure of NTMT1 in complex with N-terminally methylated PPKRIA peptide
Descriptor: GLYCEROL, N-terminal Xaa-Pro-Lys N-methyltransferase 1, RCC1, ...
Authors:Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2015-09-30
Release date:2015-10-28
Last modified:2015-12-02
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for substrate recognition by the human N-terminal methyltransferase 1.
Genes Dev., 29, 2015
8H35
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BU of 8h35 by Molmil
Cryo-EM Structure of the KBTBD2-Cul3-Rbx1 octameric complex
Descriptor: Cullin-3, E3 ubiquitin-protein ligase RBX1, Kelch repeat and BTB domain-containing protein 2, ...
Authors:Hu, Y, Mao, Q, Chen, Z, Sun, L.
Deposit date:2022-10-08
Release date:2023-10-11
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (7.41 Å)
Cite:Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3 KBTBD2.
Nat.Struct.Mol.Biol., 31, 2024
8H53
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BU of 8h53 by Molmil
Human asparaginyl-tRNA synthetase in complex with asparagine-AMP
Descriptor: 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, Asparagine--tRNA ligase, cytoplasmic, ...
Authors:Park, J.S, Han, B.W.
Deposit date:2022-10-12
Release date:2023-10-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
8Q25
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BU of 8q25 by Molmil
Outward-facing, open1 proteoliposome complex I at 2.8 A, after deactivation treatment. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-01
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8Q1U
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BU of 8q1u by Molmil
Inward-facing, open1 proteoliposome complex I at 3.3 A, after deactivation treatment. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-01
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8Q4A
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BU of 8q4a by Molmil
Outward-facing, open1 proteoliposome complex I at 2.6 A. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-05
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8EPN
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BU of 8epn by Molmil
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 in the 3-RBD Down conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Williams, J.A, Harshbarger, W.
Deposit date:2022-10-06
Release date:2023-06-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural and computational design of a SARS-CoV-2 spike antigen with improved expression and immunogenicity.
Sci Adv, 9, 2023
8EPQ
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BU of 8epq by Molmil
Cryo-EM structure of SARS-CoV-2 Spike trimer S2D14 with two RBDs exposed
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Williams, J.A, Harshbarger, W.
Deposit date:2022-10-06
Release date:2023-06-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and computational design of a SARS-CoV-2 spike antigen with improved expression and immunogenicity.
Sci Adv, 9, 2023
8H2W
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BU of 8h2w by Molmil
Cellodextrin phosphorylase from Clostridium thermocellum mutant - all cysteine residues were substituted with serines
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Kuga, T, Sunagawa, N, Igarashi, K.
Deposit date:2022-10-07
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:11 cysteine-to-serine mutations improve stability of cellodextrin phosphorylase from Clostridium thermocellum
To Be Published
8Q0Q
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BU of 8q0q by Molmil
Outward-facing, slack proteoliposome complex I at 3.6 A. Initially purified in DDM
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-07-28
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8H2V
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BU of 8h2v by Molmil
Cellodextrin phosphorylase from Clostridium thermocellum mutant - all cysteine residues were substituted with serines
Descriptor: ACETATE ION, CHLORIDE ION, Cellodextrin phosphorylase, ...
Authors:Kuga, T, Sunagawa, N, Igarashi, K.
Deposit date:2022-10-07
Release date:2023-10-11
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:11 cysteine-to-serine mutations improve stability of cellodextrin phosphorylase from Clostridium thermocellum
To Be Published
8Q48
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BU of 8q48 by Molmil
Outward-facing, closed proteoliposome complex I at 2.5 A. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-05
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8Q1P
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BU of 8q1p by Molmil
Inward-facing, open2 proteoliposome complex I at 2.9 A, after deactivation treatment. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-01
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
8Q1Y
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BU of 8q1y by Molmil
Outward-facing, open2 proteoliposome complex I at 2.6 A, after deactivation treatment. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-01
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024
5E84
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BU of 5e84 by Molmil
ATP-bound state of BiP
Descriptor: 78 kDa glucose-regulated protein, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Liu, Q, Yang, J, Nune, M, Zong, Y, Zhou, L.
Deposit date:2015-10-13
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Close and Allosteric Opening of the Polypeptide-Binding Site in a Human Hsp70 Chaperone BiP.
Structure, 23, 2015
8Q45
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BU of 8q45 by Molmil
Inward-facing, closed proteoliposome complex I at 2.7 A. Initially purified in LMNG.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Grba, D.N, Hirst, J.
Deposit date:2023-08-05
Release date:2024-06-05
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular mechanism of the ischemia-induced regulatory switch in mammalian complex I.
Science, 384, 2024

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PDB entries from 2024-08-28

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