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8OJ1
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BU of 8oj1 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
Descriptor: Auxin response factor, CHLORIDE ION, HA7
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2023-03-23
Release date:2024-04-03
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The structure and function of the DNA binding domain of class B MpARF2 share more traits with class A AtARF5 than to that of class B AtARF1.
Structure, 2025
8AHX
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BU of 8ahx by Molmil
Cryo-EM structure of the nitrogen-fixation associated NADH:ferredoxin oxidoreductase RNF from Azotobacter vinelandii
Descriptor: DODECYL-BETA-D-MALTOSIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Zhang, L, Einsle, O.
Deposit date:2022-07-24
Release date:2023-11-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Architecture of the RNF1 complex that drives biological nitrogen fixation.
Nat.Chem.Biol., 2024
6Y0Q
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BU of 6y0q by Molmil
Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe, AKG and methylated DNA under anaerobic environment using FT-SSX methods
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase AlkB, FE (III) ION, ...
Authors:Rabe, P, Beale, J.H, Lang, P.A, Dirr, A.S, Leissing, T.M, Butryn, A, Aller, P, Kamps, J.J.A.G, Axford, D, McDonough, M.A, Orville, A.M, Owen, R, Schofield, C.J.
Deposit date:2020-02-10
Release date:2020-09-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Anaerobic fixed-target serial crystallography.
Iucrj, 7, 2020
8B76
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BU of 8b76 by Molmil
The crystal structure of M644G variant of DNA Pol Epsilon containing dTTP in the polymerase active site
Descriptor: ACETATE ION, CALCIUM ION, DNA polymerase epsilon catalytic subunit A, ...
Authors:Parkash, V, Johansson, E.
Deposit date:2022-09-28
Release date:2023-11-01
Last modified:2026-03-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A sensor complements the steric gate when DNA polymerase epsilon discriminates ribonucleotides.
Nucleic Acids Res., 2023
9HAA
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BU of 9haa by Molmil
a5b3 GABAA Receptor resting state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cowgill, J, Fan, C, Howard, R.J, Lindahl, E.
Deposit date:2024-11-02
Release date:2025-11-12
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structural basis for activation and potentiation in a human a5b3 GABAA receptor
To Be Published
6Y10
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BU of 6y10 by Molmil
X-ray structure of Lactobacillus brevis alcohol dehydrogenase mutant Q126H
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, R-specific alcohol dehydrogenase
Authors:Hermann, J, Bischoff, D, Janowski, R, Niessing, D, Grob, P, Hekmat, D, Weuster-Botz, D.
Deposit date:2020-02-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Controlling Protein Crystallization by Free Energy Guided Design of Interactions at Crystal Contacts
Crystals, 11, 2021
8OJW
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BU of 8ojw by Molmil
Streptavidin WT artificial metalloenzyme for carboamination
Descriptor: CHLORIDE ION, SULFATE ION, Streptavidin, ...
Authors:Igareta, N.V, Ward, T.R.
Deposit date:2023-03-25
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.484 Å)
Cite:Streptavidin WT artificial metalloenzyme for carboamination
To Be Published
6UD4
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BU of 6ud4 by Molmil
GluA2 in complex with its auxiliary subunit CNIH3 in AS map II - (LBD-TMD-C3(AS) II)- with antagonist ZK200775, without NTD
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, Glutamate receptor 2, ...
Authors:Nakagawa, T.
Deposit date:2019-09-18
Release date:2019-12-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of the AMPA receptor in complex with its auxiliary subunit cornichon.
Science, 366, 2019
9BRO
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BU of 9bro by Molmil
Crystal Structure of Human G Protein-Coupled Receptor Kinase 5 in Complex with GRL030-22
Descriptor: (3Z)-3-[(4-{[(2S)-1-methoxypropan-2-yl]carbamoyl}-3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-2-oxo-N-[(1R)-1-phenylethyl]-3,7-dihydro-2H-indole-5-carboxamide, G protein-coupled receptor kinase 5
Authors:Chen, Y, Tesmer, J.J.G.
Deposit date:2024-05-11
Release date:2025-11-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of GRK5 in complex with novel inhibitors
To Be Published
8ATB
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BU of 8atb by Molmil
Discovery of IRAK4 Inhibitor 16
Descriptor: GLYCEROL, Interleukin-1 receptor-associated kinase 4, ~{N}-[6-ethoxy-2-[2-(4-methylpiperazin-1-yl)-2-oxidanylidene-ethyl]indazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-08-22
Release date:2023-11-29
Last modified:2026-03-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
6UDZ
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BU of 6udz by Molmil
S2 symmetric peptide design number 4 crystal form 1, Pugsley
Descriptor: S2-4, Pusgley crystal form 1, trifluoroacetic acid
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-20
Release date:2020-09-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
6Y18
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BU of 6y18 by Molmil
Ternary complex of 14-3-3 sigma (C38N), Estrogen Related Receptor gamma (DBD) phosphopeptide, and disulfide PPI stabilizer 3
Descriptor: 14-3-3 protein sigma, 4-fluoranyl-~{N}-methyl-~{N}-(2-sulfanylethyl)benzamide, CHLORIDE ION, ...
Authors:Somsen, B.A, Ottmann, C.
Deposit date:2020-02-11
Release date:2020-11-18
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Fluorescence Anisotropy-Based Tethering for Discovery of Protein-Protein Interaction Stabilizers.
Acs Chem.Biol., 15, 2020
9HS1
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BU of 9hs1 by Molmil
Crystal structure of the Escherichia coli nucleosidase PpnN (partial alarmone form)
Descriptor: 5-O-phosphono-alpha-D-ribofuranose, GUANINE, Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase, ...
Authors:Baerentsen, R.L, Brodersen, D.E.
Deposit date:2024-12-18
Release date:2025-11-12
Last modified:2026-01-21
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Catalytic mechanism and differential alarmone regulation of a conserved stringent nucleosidase.
Structure, 34, 2026
9C2G
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BU of 9c2g by Molmil
ISOBUTYLENE EPOXIDE HYDROLASE FROM MYCOLICIBACTERIUM
Descriptor: GLYCEROL, Isobutylene epoxide hydrolase, MAGNESIUM ION, ...
Authors:Rose, R.B, Swartz, P, Faulkner, N.W.
Deposit date:2024-05-30
Release date:2025-10-01
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Characterization of an isobutylene epoxide hydrolase (IbcK) from the isobutylene-catabolizing bacterium Mycolicibacterium sp. ELW1.
Appl.Environ.Microbiol., 91, 2025
8OOM
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BU of 8oom by Molmil
Structural and functional studies of geldanamycin amide synthase ShGdmF
Descriptor: (2R)-2,4-dihydroxy-3,3-dimethyl-N-{3-oxo-3-[(2-sulfanylethyl)amino]propyl}butanamide, ACETATE ION, GdmF
Authors:Ewert, W, Zeilinger, C, Kirschning, A, Preller, M.
Deposit date:2023-04-05
Release date:2024-04-17
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure and function of the geldanamycin amide synthase from Streptomyces hygroscopicus.
Nat Commun, 16, 2025
6Y1E
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BU of 6y1e by Molmil
Crystal structure of human glutathione transferase P1-1 (hGSTP1-1) that was co-crystallised in the presence of indanyloxyacetic acid-94 (IAA-94)
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-[[6,7-bis(chloranyl)-2-cyclopentyl-2-methyl-1-oxidanylidene-3~{H}-inden-5-yl]oxy]ethanoic acid, GLUTATHIONE, ...
Authors:Pandian, R, Worth, R, Thangaraj, V, Sayed, Y, Dirr, H.W.
Deposit date:2020-02-12
Release date:2020-03-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.402 Å)
Cite:The interaction of IAA-94 with the soluble conformation of the CLIC1 protein and its structural homolog hGSTP1-1
To Be Published
6UE3
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BU of 6ue3 by Molmil
Crystal structure of HCV NS3/4A D168A protease in complex with PC (JZ01-15)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NS3 protease, ...
Authors:Zephyr, J, Schiffer, C.A.
Deposit date:2019-09-20
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Avoiding Drug Resistance by Substrate Envelope-Guided Design: Toward Potent and Robust HCV NS3/4A Protease Inhibitors.
Mbio, 11, 2020
8AHY
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BU of 8ahy by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-07-25
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
9BLQ
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BU of 9blq by Molmil
X-ray crystal structure of Streptomyces cacaoi PolD with iron and succinate bound
Descriptor: FE (III) ION, Putative hydroxylase, SUCCINIC ACID, ...
Authors:Collazo-Perez, L.N, Majer, S.H, Boal, A.K.
Deposit date:2024-05-01
Release date:2025-11-05
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mechanism and evolutionary origin of the radical-mediated C-C bond cleavage in antifungal nucleotide biosynthesis
To Be Published
8P75
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BU of 8p75 by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-down conformation)
Descriptor: (2S,3S)-3-[[7-[(2-bromophenyl)methylamino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]butane-1,2,4-triol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
8ALH
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BU of 8alh by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-08-01
Release date:2023-12-13
Last modified:2026-03-04
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8P74
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BU of 8p74 by Molmil
Cryo-EM structure of CAK in complex with inhibitor ICEC0880 (ring-up conformation)
Descriptor: (2S,3S)-3-[[7-[(2-bromophenyl)methylamino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]butane-1,2,4-triol, CDK-activating kinase assembly factor MAT1, Cyclin-H, ...
Authors:Cushing, V.I, Koh, A.F, Feng, J, Jurgaityte, K, Bahl, A.K, Ali, S, Kotecha, A, Greber, B.J.
Deposit date:2023-05-30
Release date:2024-03-20
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:High-resolution cryo-EM of the human CDK-activating kinase for structure-based drug design.
Nat Commun, 15, 2024
6Y1W
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BU of 6y1w by Molmil
Xcc4156, a flavin-dependent halogenase from Xanthomonas campestris
Descriptor: (2S,3S)-butane-2,3-diol, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, L(+)-TARTARIC ACID, ...
Authors:Widmann, C, Ismail, M, Sewald, N, Niemann, H.H.
Deposit date:2020-02-14
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of apo flavin-dependent halogenase Xcc4156 hints at a reason for cofactor-soaking difficulties.
Acta Crystallogr D Struct Biol, 76, 2020
6UYK
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BU of 6uyk by Molmil
Dark-operative protochlorophyllide oxidoreductase in the nucleotide-free form.
Descriptor: CHLORIDE ION, IRON/SULFUR CLUSTER, Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein
Authors:Bacik, J.P, Imran, S.M.S, Watkins, M.B, Corless, E, Antony, E, Ando, N.
Deposit date:2019-11-13
Release date:2020-12-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and released upon ATP binding.
J.Biol.Chem., 296, 2020
9C13
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BU of 9c13 by Molmil
XMAP215 TOG5 interaction with GMPCPP tubulin lattice
Descriptor: Cytoskeleton-associated protein 5-A,Cytoskeleton-associated protein 5-A,Green fluorescent protein, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:McManus, C.T, Travis, S.M, Jeffrey, P.D, Zhang, R, Petry, S.
Deposit date:2024-05-28
Release date:2025-11-05
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure and function of XMAP215s C terminal domains in microtubule nucleation
To Be Published

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PDB entries from 2026-04-29

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