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PDB: 46 results

3OSN
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BU of 3osn by Molmil
Structural Basis for Proficient Incorporation of dTTP Opposite O6-Methylguanine by Human DNA Polymerase Iota
Descriptor: 5'-D(*TP*CP*TP*(6OG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3', DNA polymerase iota, MAGNESIUM ION, ...
Authors:Pence, M.G.
Deposit date:2010-09-09
Release date:2010-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Proficient Incorporation of dTTP Opposite O6-Methylguanine by Human DNA Polymerase {iota}.
J.Biol.Chem., 285, 2010
3Q8P
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BU of 3q8p by Molmil
Human DNA polymerase iota incorporating dCTP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
5ULX
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BU of 5ulx by Molmil
Structure of human DNA polymerase iota bound to template 1-methyl-deoxyadenosine crystallized in the presence of dCTP
Descriptor: CHLORIDE ION, DNA (5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA (5'-D(P*(MA7)P*GP*GP*GP*TP*CP*CP*T)-3'), ...
Authors:Jain, R, Aggarwal, A.K.
Deposit date:2017-01-25
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Mechanism of error-free DNA synthesis across N1-methyl-deoxyadenosine by human DNA polymerase-iota.
Sci Rep, 7, 2017
3GV5
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BU of 3gv5 by Molmil
Human DNA polymerase iota in complex with T template DNA and incoming ddADP
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE, 5'-D(*GP*TP*GP*GP*AP*TP*GP*AP*G)-3', 5'-D(P*CP*AP*TP*TP*CP*TP*CP*AP*TP*CP*CP*AP*C)-3', ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2009-03-30
Release date:2009-06-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of error-prone replication and stalling at a thymine base by human DNA polymerase iota
Embo J., 28, 2009
3GV8
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BU of 3gv8 by Molmil
Human DNA polymerase iota in complex with T template DNA and incoming dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*C)-3', 5'-D(*AP*TP*GP*GP*GP*TP*CP*CP*T)-3', ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2009-03-30
Release date:2009-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of error-prone replication and stalling at a thymine base by human DNA polymerase iota
Embo J., 28, 2009
3Q8Q
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BU of 3q8q by Molmil
Human DNA polymerase iota incorporating dATP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.031 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
4FS2
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BU of 4fs2 by Molmil
Base pairing mechanism of N2,3-ethenoguanine with dCTP by human polymerase iota
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*TP*(EFG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3'), DNA polymerase iota, ...
Authors:Zhao, L.
Deposit date:2012-06-26
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Basis of Miscoding of the DNA Adduct N2,3-Ethenoguanine by Human Y-family DNA Polymerases.
J.Biol.Chem., 287, 2012
3G6X
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BU of 3g6x by Molmil
Ternary complex of DNA Polymerase iota:DNA:dGTP with an abasic site at the templating position
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase iota, MAGNESIUM ION, ...
Authors:Nair, D.T, Aggarwal, A.K.
Deposit date:2009-02-09
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:DNA Synthesis across an Abasic Lesion by Human DNA Polymerase iota.
Structure, 17, 2009
3Q8S
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BU of 3q8s by Molmil
Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
Descriptor: DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), DNA polymerase iota, ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Human DNA polymerase iota incorporating dTTP opposite 8-oxo-guanine
To be Published
3G6Y
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BU of 3g6y by Molmil
Ternary complex of DNA Polymerase iota:DNA:dTTP with an abasic site at the templating position
Descriptor: DNA polymerase iota, MAGNESIUM ION, Primer DNA strand, ...
Authors:Nair, D.T, Aggarwal, A.K.
Deposit date:2009-02-09
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA Synthesis across an Abasic Lesion by Human DNA Polymerase iota
Structure, 17, 2009
4EBE
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BU of 4ebe by Molmil
Conformationally Restrained North-methanocarba-2'-deoxyadenosine Corrects the Error-Prone Nature of Human DNA Polymerase Iota
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(P*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(P*CP*TP*GP*GP*GP*TP*CP*CP*T)-3', ...
Authors:Eoff, R.L, Ketkar, A, Banerjee, S.
Deposit date:2012-03-23
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Nucleotide-Analogue-Induced Gain of Function Corrects the Error-Prone Nature of Human DNA Polymerase iota.
J.Am.Chem.Soc., 134, 2012
3GV7
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BU of 3gv7 by Molmil
Human DNA polymerase iota in complex with T template DNA and incoming dTTP
Descriptor: 5'-D(*AP*GP*GP*AP*CP*CP*C)-3', 5'-D(P*AP*TP*GP*GP*GP*TP*CP*CP*T)-3', DNA polymerase iota, ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2009-03-30
Release date:2009-06-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of error-prone replication and stalling at a thymine base by human DNA polymerase iota
Embo J., 28, 2009
3H4D
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BU of 3h4d by Molmil
Ternary complex of human DNA polymerase iota with template U/T and incoming dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*(DOC)), 5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T), ...
Authors:Jain, R, Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2009-04-18
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Replication across template T/U by human DNA polymerase-iota.
Structure, 17, 2009
3G6V
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BU of 3g6v by Molmil
DNA synthesis across an abasic lesion by human DNA polymerase-iota
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA polymerase iota, MAGNESIUM ION, ...
Authors:Nair, D.T, Aggarwal, A.K.
Deposit date:2009-02-09
Release date:2009-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:DNA Synthesis across an Abasic Lesion by Human DNA Polymerase iota
Structure, 17, 2009
1T3N
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BU of 1t3n by Molmil
Structure of the catalytic core of DNA polymerase Iota in complex with DNA and dTTP
Descriptor: MAGNESIUM ION, Primer DNA strand, THYMIDINE-5'-TRIPHOSPHATE, ...
Authors:Nair, D.T, Johnson, R.E, Prakash, S, Prakash, L, Aggarwal, A.K.
Deposit date:2004-04-27
Release date:2004-07-20
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing.
Nature, 430, 2004
3H40
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BU of 3h40 by Molmil
Binary complex of human DNA polymerase iota with template U/T
Descriptor: 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*(BRU)P*GP*GP*GP*TP*CP*CP*T)-3', DNA polymerase iota, ...
Authors:Jain, R, Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2009-04-17
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Replication across template T/U by human DNA polymerase-iota.
Structure, 17, 2009
1ZET
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BU of 1zet by Molmil
X-ray data do not support hoogsteen base-pairing during replication by human polymerase iota
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(P*AP*GP*GP*GP*(BRU)P*CP*CP*(BRU)P*(BRU)P*CP*CP*CP*CP*C)-3', MAGNESIUM ION, ...
Authors:Wang, J.
Deposit date:2005-04-19
Release date:2005-07-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:DNA polymerases: Hoogsteen base-pairing in DNA replication?
Nature, 437, 2005
2DPJ
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BU of 2dpj by Molmil
structure of hPoli with DNA and dTTP
Descriptor: 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*(EDA)P*GP*GP*GP*TP*CP*CP*T)-3', DNA polymerase iota, ...
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2006-05-12
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hoogsteen base pair formation promotes synthesis opposite the 1,N(6)-ethenodeoxyadenosine lesion by human DNA polymerase iota.
Nat.Struct.Mol.Biol., 13, 2006
2DPI
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BU of 2dpi by Molmil
Ternary complex of hPoli with DNA and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*(EDA)P*GP*GP*GP*TP*CP*CP*T)-3', ...
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2006-05-12
Release date:2006-07-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Hoogsteen base pair formation promotes synthesis opposite the 1,N(6)-ethenodeoxyadenosine lesion by human DNA polymerase iota.
Nat.Struct.Mol.Biol., 13, 2006
2FLP
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BU of 2flp by Molmil
Binary complex of the catalytic core of human DNA polymerase iota with DNA (template G)
Descriptor: DNA polymerase iota, DNA primer strand, DNA template strand
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2006-01-06
Release date:2006-12-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:An incoming nucleotide imposes an anti to syn conformational change on the templating purine in the human DNA polymerase-iota active site.
Structure, 14, 2006
3Q8R
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BU of 3q8r by Molmil
Human DNA polymerase iota incorporating dGTP opposite 8-oxo-guanine
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*CP*AP*(8OG)P*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2011-01-06
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.
Proc.Natl.Acad.Sci.USA, 108, 2011
5KT2
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BU of 5kt2 by Molmil
Teranry complex of human DNA polymerase iota(26-445) inserting dCMPNPP opposite template G in the presence of Mg2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*TP*GP*GP*GP*GP*TP*CP*CP*T)-3'), DNA (5'-D(P*AP*GP*GP*AP*CP*CP*C)-3'), ...
Authors:Choi, J.Y, Patra, A, Yeom, M, Lee, Y.S, Zhang, Q, Egli, M, Guengerich, F.P.
Deposit date:2016-07-11
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.488 Å)
Cite:Kinetic and Structural Impact of Metal Ions and Genetic Variations on Human DNA Polymerase iota.
J.Biol.Chem., 291, 2016
4FS1
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BU of 4fs1 by Molmil
Base pairing mechanism of N2,3-ethenoguanine with dTTP by human polymerase iota
Descriptor: DNA 5'-D(*TP*CP*TP*(EFG)P*GP*GP*GP*TP*CP*CP*TP*AP*GP*GP*AP*CP*CP*(DOC))-3', DNA polymerase iota, MAGNESIUM ION, ...
Authors:Zhao, L.
Deposit date:2012-06-26
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Basis of Miscoding of the DNA Adduct N2,3-Ethenoguanine by Human Y-family DNA Polymerases.
J.Biol.Chem., 287, 2012
3EPG
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BU of 3epg by Molmil
Structure of Human DNA Polymerase Iota complexed with N2-ethylguanine
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*DTP*DCP*DTP*(2EG)P*DGP*DGP*DGP*DTP*DCP*DCP*DTP*DAP*DGP*DGP*DAP*DCP*DCP*(DOC))-3', DNA polymerase iota, ...
Authors:Pence, M.G.
Deposit date:2008-09-29
Release date:2008-12-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lesion bypass of N2-ethylguanine by human DNA polymerase iota.
J.Biol.Chem., 284, 2009
2ALZ
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BU of 2alz by Molmil
Ternary Complex of hPoli with DNA and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*AP*CP*CP*(DOC))-3', 5'-D(*TP*GP*GP*GP*GP*TP*CP*CP*T)-3', ...
Authors:Nair, D.T, Johnson, R.E, Prakash, L, Prakash, S, Aggarwal, A.K.
Deposit date:2005-08-08
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human DNA Polymerase iota Incorporates dCTP Opposite Template G via a G.C+ Hoogsteen Base Pair.
Structure, 13, 2005

 

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