7VXE
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![BU of 7vxe by Molmil](/molmil-images/mine/7vxe) | SARS-CoV-2 Kappa variant spike protein in open state | Descriptor: | Spike glycoprotein | Authors: | Xu, C, Cong, Y. | Deposit date: | 2021-11-12 | Release date: | 2021-12-01 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM. Nat Commun, 12, 2021
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7VXI
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![BU of 7vxi by Molmil](/molmil-images/mine/7vxi) | SARS-CoV-2 Kappa variant spike protein in transition state | Descriptor: | Spike glycoprotein | Authors: | Xu, C, Cong, Y. | Deposit date: | 2021-11-12 | Release date: | 2021-12-22 | Last modified: | 2022-02-16 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Conformational dynamics of the Beta and Kappa SARS-CoV-2 spike proteins and their complexes with ACE2 receptor revealed by cryo-EM. Nat Commun, 12, 2021
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7U2D
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![BU of 7u2d by Molmil](/molmil-images/mine/7u2d) | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, ADG20 heavy chain, ADG20 light chain, ... | Authors: | Zhu, X, Yuan, M, Wilson, I.A. | Deposit date: | 2022-02-23 | Release date: | 2022-05-04 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.76 Å) | Cite: | A broad and potent neutralization epitope in SARS-related coronaviruses. Proc.Natl.Acad.Sci.USA, 119, 2022
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7VYR
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![BU of 7vyr by Molmil](/molmil-images/mine/7vyr) | |
7TPI
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![BU of 7tpi by Molmil](/molmil-images/mine/7tpi) | SARS-CoV-2 E406W mutant Spike ectodomain | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein | Authors: | Addetia, A, Veesler, D. | Deposit date: | 2022-01-25 | Release date: | 2023-11-15 | Method: | ELECTRON MICROSCOPY (2.3 Å) | Cite: | SARS-CoV-2 E406W mutant Spike ectodomain To Be Published
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7V2A
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![BU of 7v2a by Molmil](/molmil-images/mine/7v2a) | SARS-CoV-2 Spike trimer in complex with XG014 Fab | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, The heavy chain of XG014, ... | Authors: | Wang, K, Wang, X, Pan, L. | Deposit date: | 2021-08-07 | Release date: | 2021-10-20 | Last modified: | 2022-07-06 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | An ultrapotent pan-beta-coronavirus lineage B ( beta-CoV-B) neutralizing antibody locks the receptor-binding domain in closed conformation by targeting its conserved epitope. Protein Cell, 13, 2022
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7UHB
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![BU of 7uhb by Molmil](/molmil-images/mine/7uhb) | |
7V26
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![BU of 7v26 by Molmil](/molmil-images/mine/7v26) | XG005-bound SARS-CoV-2 S | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, XG005 Heavy chain, ... | Authors: | Zhan, W.Q, Zhang, X, Sun, L, Chen, Z.G. | Deposit date: | 2021-08-07 | Release date: | 2021-10-20 | Last modified: | 2022-07-06 | Method: | ELECTRON MICROSCOPY (3.85 Å) | Cite: | An ultrapotent pan-beta-coronavirus lineage B ( beta-CoV-B) neutralizing antibody locks the receptor-binding domain in closed conformation by targeting its conserved epitope. Protein Cell, 13, 2022
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7VRV
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![BU of 7vrv by Molmil](/molmil-images/mine/7vrv) | VAS5 Spike (1 RBD up) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein | Authors: | Zhen, C, Wang, X. | Deposit date: | 2021-10-25 | Release date: | 2022-06-22 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | VAS5 Spike(1 RBD up) To Be Published
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7VRW
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![BU of 7vrw by Molmil](/molmil-images/mine/7vrw) | VAS5 Spike (3 RBD down) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein | Authors: | Zhen, C, Wang, X. | Deposit date: | 2021-10-25 | Release date: | 2022-06-22 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | VAS5 Spike (3-RBD down) To Be Published
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7UOW
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![BU of 7uow by Molmil](/molmil-images/mine/7uow) | SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal antibody 034_32 heavy chain, ... | Authors: | Patel, A, Ortlund, E. | Deposit date: | 2022-04-14 | Release date: | 2023-04-19 | Last modified: | 2023-09-13 | Method: | ELECTRON MICROSCOPY (4.4 Å) | Cite: | Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response. Structure, 31, 2023
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7VHL
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![BU of 7vhl by Molmil](/molmil-images/mine/7vhl) | |
7VHK
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![BU of 7vhk by Molmil](/molmil-images/mine/7vhk) | |
7VHJ
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![BU of 7vhj by Molmil](/molmil-images/mine/7vhj) | |
7VHM
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![BU of 7vhm by Molmil](/molmil-images/mine/7vhm) | |
7VQ0
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![BU of 7vq0 by Molmil](/molmil-images/mine/7vq0) | Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | Authors: | Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A. | Deposit date: | 2021-10-18 | Release date: | 2022-07-20 | Method: | ELECTRON MICROSCOPY (3.03 Å) | Cite: | A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron. Commun Biol, 5, 2022
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7UB0
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![BU of 7ub0 by Molmil](/molmil-images/mine/7ub0) | |
7UB5
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![BU of 7ub5 by Molmil](/molmil-images/mine/7ub5) | |
7UB6
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![BU of 7ub6 by Molmil](/molmil-images/mine/7ub6) | |
7UAQ
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![BU of 7uaq by Molmil](/molmil-images/mine/7uaq) | Structure of the SARS-CoV-2 NTD in complex with C1520, local refinement | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, C1520 Fab Heavy Chain, ... | Authors: | Barnes, C.O. | Deposit date: | 2022-03-13 | Release date: | 2022-04-27 | Last modified: | 2022-06-22 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Analysis of memory B cells identifies conserved neutralizing epitopes on the N-terminal domain of variant SARS-Cov-2 spike proteins. Immunity, 55, 2022
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7UAP
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![BU of 7uap by Molmil](/molmil-images/mine/7uap) | |
7UAR
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![BU of 7uar by Molmil](/molmil-images/mine/7uar) | |
7URS
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![BU of 7urs by Molmil](/molmil-images/mine/7urs) | |
7URQ
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![BU of 7urq by Molmil](/molmil-images/mine/7urq) | |
7VOA
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![BU of 7voa by Molmil](/molmil-images/mine/7voa) | Crystal structure of SARS-CoV-2 RBD in complex with aRBD5 | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpaca nanobody | Authors: | Ma, H, Zeng, W.H, Jin, T.C. | Deposit date: | 2021-10-13 | Release date: | 2022-08-10 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron. Cell Res., 32, 2022
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