Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KXU
DownloadVisualize
BU of 4kxu by Molmil
Human transketolase in covalent complex with donor ketose D-fructose-6-phosphate
Descriptor: 1,2-ETHANEDIOL, D-SORBITOL-6-PHOSPHATE, MAGNESIUM ION, ...
Authors:Neumann, P, Luedtke, S, Ficner, R, Tittmann, K.
Deposit date:2013-05-28
Release date:2013-08-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Sub-angstrom-resolution crystallography reveals physical distortions that enhance reactivity of a covalent enzymatic intermediate.
Nat Chem, 5, 2013
4L6I
DownloadVisualize
BU of 4l6i by Molmil
Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with adenine
Descriptor: ADENINE, S-methyl-5'-thioadenosine phosphorylase, SULFATE ION
Authors:Torini, J.R, DeMarco, R, Brandao-Neto, J, Pereira, H.M.
Deposit date:2013-06-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway.
Plos Negl Trop Dis, 10, 2016
3HIH
DownloadVisualize
BU of 3hih by Molmil
Structure of human Plk1-PBD with glycerol and sulfate in the phophopeptide binding site
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
Authors:Wlodawer, A, Moulaei, T.
Deposit date:2009-05-20
Release date:2009-06-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional analyses of minimal phosphopeptides targeting the polo-box domain of polo-like kinase 1.
Nat.Struct.Mol.Biol., 16, 2009
3HIO
DownloadVisualize
BU of 3hio by Molmil
Crystal structure of Ricin A-chain in complex with the cyclic tetranucleotide inhibitor, a transition state analogue
Descriptor: 9,9'-{(2R,3R,3aR,5S,7aR,9R,10R,10aR,12S,23R,25aR,27R,28R,28aR,30S,32aR,35aR,37S,39aR)-9-(6-amino-9H-purin-9-yl)-34-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-5,12,23,30,37-pentahydroxy-3,10,28-trimethoxy-5,12,23,30,37-pentaoxidotetracosahydro-2H,7H,25H-trifuro[3,2-f:3',2'-l:3'',2''-x]pyrrolo[3,4-r][1,3,5,9,11,15,17,21,23,27,29,2,4,10,16,22,28]undecaoxazapentaphosphacyclopentatriacontine-2,27-diyl}bis(2-amino-3,9-dihydro-6H-purin-6-one), Ricin, SULFATE ION
Authors:Ho, M, Sturm, M.B, Goldman, J.D, Almo, S.C, Schramm, V.L.
Deposit date:2009-05-20
Release date:2009-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Transition state analogues in structures of ricin and saporin ribosome-inactivating proteins.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HIM
DownloadVisualize
BU of 3him by Molmil
The Crystal Structure of a Bacterial Regulatory Protein in the tetR Family from Rhodococcus RHA1 to 2.2A
Descriptor: Probable transcriptional regulator
Authors:Stein, A.J, Binkowski, T.A, Evdokimova, E, Kagan, O, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-05-20
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of a Bacterial Regulatory Protein in the tetR Family from Rhodococcus RHA1 to 2.2A
To be Published
4KZ7
DownloadVisualize
BU of 4kz7 by Molmil
Crystal structure of AmpC beta-lactamase in complex with fragment 16 ((1R,4S)-4,7,7-trimethyl-3-oxo-2-oxabicyclo[2.2.1]heptane-1-carboxylic acid)
Descriptor: (1R,4S)-4,7,7-trimethyl-3-oxo-2-oxabicyclo[2.2.1]heptane-1-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Eidam, O, Barelier, S, Fish, I, Shoichet, B.K.
Deposit date:2013-05-29
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Increasing chemical space coverage by combining empirical and computational fragment screens.
Acs Chem.Biol., 9, 2014
3HIZ
DownloadVisualize
BU of 3hiz by Molmil
Crystal structure of p110alpha H1047R mutant in complex with niSH2 of p85alpha
Descriptor: Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Amzel, L.M, Vogelstein, B, Gabelli, S.B, Mandelker, D.
Deposit date:2009-05-20
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A frequent kinase domain mutation that changes the interaction between PI3K{alpha} and the membrane.
Proc.Natl.Acad.Sci.USA, 106, 2009
4PT4
DownloadVisualize
BU of 4pt4 by Molmil
Crystal structure Analysis of N terminal region containing the dimerization domain and DNA binding domain of HU protein(Histone like protein-DNA binding) from Mycobacterium tuberculosis [H37Ra]
Descriptor: DNA-binding protein HU homolog, FORMIC ACID
Authors:Bhowmick, T, Ramagopal, U.A, Ghosh, S, Nagaraja, V, Ramakumar, S.
Deposit date:2014-03-10
Release date:2014-05-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Targeting Mycobacterium tuberculosis nucleoid-associated protein HU with structure-based inhibitors
Nat Commun, 5, 2014
2EMQ
DownloadVisualize
BU of 2emq by Molmil
Hypothetical Conserved Protein (GK1048) from Geobacillus Kaustophilus
Descriptor: Hypothetical conserved protein
Authors:Rehse, P.H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hypothetical Conserved Protein (GK1048) from Geobacillus Kaustophilus
To be Published
3QD3
DownloadVisualize
BU of 3qd3 by Molmil
Phosphoinositide-Dependent Kinase-1 (PDK1) kinase domain with 1,1-Dimethylethyl {(3R,6S)-1-[2-amino-6-(3-amino-1H-indazol-6-yl)-4-pyrimidinyl]-6-methyl-3-piperidinyl}carbamate
Descriptor: 3-phosphoinositide-dependent protein kinase 1, GLYCEROL, SULFATE ION, ...
Authors:Medina, J.R, Becker, C.J, Blackledge, C.W, Duquenne, C, Feng, Y, Grant, S.W, Heerding, D, Li, W.H, Miller, W.H, Romeril, S.P, Scherzer, D, Shu, A, Bobko, M.A, Chadderton, A.R, Dumble, M, Gradiner, C.M, Gilbert, S, Liu, Q, Rabindran, S.K, Sudakin, V, Xiang, H, Brady, P.G, Campobasso, N, Ward, P, Axten, J.M.
Deposit date:2011-01-17
Release date:2011-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-Based Design of Potent and Selective 3-Phosphoinositide-Dependent Kinase-1 (PDK1) Inhibitors.
J.Med.Chem., 54, 2011
2OVC
DownloadVisualize
BU of 2ovc by Molmil
Crystal structure of a coiled-coil tetramerization domain from Kv7.4 channels
Descriptor: Potassium voltage-gated channel subfamily KQT member 4
Authors:Howard, R.J, Clark, K.A, Holton, J.M, Minor, D.L.
Deposit date:2007-02-13
Release date:2007-03-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural Insight into KCNQ (Kv7) Channel Assembly and Channelopathy.
Neuron, 53, 2007
3QHB
DownloadVisualize
BU of 3qhb by Molmil
Crystal structure of oxidized Symerythrin from Cyanophora paradoxa
Descriptor: FE (III) ION, Symerythrin
Authors:Cooley, R.B, Arp, D.J, Karplus, P.A.
Deposit date:2011-01-25
Release date:2011-05-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A diiron protein autogenerates a valine-phenylalanine cross-link.
Science, 332, 2011
2OVH
DownloadVisualize
BU of 2ovh by Molmil
Progesterone Receptor with Bound Asoprisnil and a Peptide from the Co-Repressor SMRT
Descriptor: 4-[(11BETA,17BETA)-17-METHOXY-17-(METHOXYMETHYL)-3-OXOESTRA-4,9-DIEN-11-YL]BENZALDEHYDE OXIME, Progesterone receptor, SMRT peptide
Authors:Madauss, K.P, Deng, S.-J, Short, S.A, Stewart, E.L, Williams, S.P.
Deposit date:2007-02-13
Release date:2007-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A structural and in vitro characterization of asoprisnil: a selective progesterone receptor modulator.
Mol.Endocrinol., 21, 2007
4KV0
DownloadVisualize
BU of 4kv0 by Molmil
Crystal structure of human carbonic anhydrase II in complex with the 5-(3-tosylureido)pyridine-2-sulfonamide inhibitor
Descriptor: 5-({[(4-methylphenyl)sulfonyl]carbamoyl}amino)pyridine-2-sulfonamide, BETA-MERCAPTOETHANOL, Carbonic anhydrase 2, ...
Authors:Ferraroni, M.
Deposit date:2013-05-22
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Combining the tail and the ring approaches for obtaining potent and isoform-selective carbonic anhydrase inhibitors: solution and X-ray crystallographic studies.
Bioorg.Med.Chem., 22, 2014
3HDZ
DownloadVisualize
BU of 3hdz by Molmil
Identification, Synthesis, and SAR of Amino Substituted Pyrido[3,2b]pryaziones as Potent and Selective PDE5 Inhibitors
Descriptor: 5-amino-1-butyl-7-phenyl-1,6-naphthyridin-4(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Cubbage, J.W, Brown, D.G, Jacobsen, E.J, Walker, J.K, Hughes, R.O.
Deposit date:2009-05-07
Release date:2009-07-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification, synthesis and SAR of amino substituted pyrido[3,2b]pyrazinones as potent and selective PDE5 inhibitors.
Bioorg.Med.Chem.Lett., 19, 2009
3HHM
DownloadVisualize
BU of 3hhm by Molmil
Crystal structure of p110alpha H1047R mutant in complex with niSH2 of p85alpha and the drug wortmannin
Descriptor: (1S,6BR,9AS,11R,11BR)-9A,11B-DIMETHYL-1-[(METHYLOXY)METHYL]-3,6,9-TRIOXO-1,6,6B,7,8,9,9A,10,11,11B-DECAHYDRO-3H-FURO[4, 3,2-DE]INDENO[4,5-H][2]BENZOPYRAN-11-YL ACETATE, Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform, ...
Authors:Amzel, L.M, Vogelstein, B, Gabelli, S.B, Mandelker, D.
Deposit date:2009-05-15
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A frequent kinase domain mutation that changes the interaction between PI3K{alpha} and the membrane.
Proc.Natl.Acad.Sci.USA, 106, 2009
3HFD
DownloadVisualize
BU of 3hfd by Molmil
Nucleosome Assembly Protein 1 from Plasmodium knowlesi
Descriptor: Nucleosome assembly protein 1
Authors:Arakaki, T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
Deposit date:2009-05-11
Release date:2009-05-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nucleosome Assembly Protein 1 from Plasmodium knowlesi
To be Published
3QEQ
DownloadVisualize
BU of 3qeq by Molmil
The complex between TCR DMF4 and human Class I MHC HLA-A2 with the bound MART-1(27-35) nonameric peptide
Descriptor: Beta-2-microglobulin, DMF4 alpha chain, DMF4 beta chain, ...
Authors:Borbulevych, O.Y, Baker, B.M.
Deposit date:2011-01-20
Release date:2011-07-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:TCRs Used in Cancer Gene Therapy Cross-React with MART-1/Melan-A Tumor Antigens via Distinct Mechanisms.
J.Immunol., 187, 2011
2P2M
DownloadVisualize
BU of 2p2m by Molmil
Acetyl-CoA Synthetase, R194A mutation
Descriptor: ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER, Acetyl-coenzyme A synthetase
Authors:Reger, A.S, Gulick, A.M.
Deposit date:2007-03-07
Release date:2007-05-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Biochemical and Crystallographic Analysis of Substrate Binding and Conformational Changes in Acetyl-CoA Synthetase.
Biochemistry, 46, 2007
4KY2
DownloadVisualize
BU of 4ky2 by Molmil
Transthyretin in complex with the fluorescent folding sensor (E)-7-hydroxy-3-(4-hydroxy-3,5-dimethylstyryl)-4-methyl-2H-chromen-2-one
Descriptor: 7-hydroxy-3-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]-4-methyl-2H-chromen-2-one, Transthyretin
Authors:Connelly, S, Wilson, I.A, Choi, S.
Deposit date:2013-05-28
Release date:2013-08-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Bifunctional coumarin derivatives that inhibit transthyretin amyloidogenesis and serve as fluorescent transthyretin folding sensors.
Chem.Commun.(Camb.), 49, 2013
4KVB
DownloadVisualize
BU of 4kvb by Molmil
Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, E.L, Jogl, G.
Deposit date:2013-05-22
Release date:2014-06-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (4.198 Å)
Cite:Structural robustness of the ribosome inferred from the X-ray crystal structure of a 30S ribosomal subunit lacking ribosomal protein S17
To be Published
2OX7
DownloadVisualize
BU of 2ox7 by Molmil
Crystal structure of protein EF1440 from Enterococcus faecalis
Descriptor: Hypothetical protein
Authors:Malashkevich, V.N, Toro, R, Sauder, J.M, Schwinn, K.D, Thompson, D.A, Bain, K.T, Adams, J.M, Reyes, C, Lau, C, Gilmore, J, Rooney, I, Gheyi, T, Wasserman, S.R, Emtage, S, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-02-19
Release date:2007-03-06
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.777 Å)
Cite:Crystal structure of the hypothetical protein from Enterococcus faecalis
To be Published
4KY5
DownloadVisualize
BU of 4ky5 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Heroux, A, Garcia-Moreno E, B.
Deposit date:2013-05-28
Release date:2013-06-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D at pH 7 and cryogenic temperature
To be Published
3HGD
DownloadVisualize
BU of 3hgd by Molmil
Crystal Structure of 2-Se-Thymidine Derivatized DNA
Descriptor: 5'-D(*GP*(UMS)P*GP*(US3)P*AP*CP*AP*C)-3'
Authors:Sheng, J, Hassan, A.E, Zhang, W, Huang, Z.
Deposit date:2009-05-13
Release date:2009-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:High fidelity of base pairing by 2-selenothymidine in DNA.
J.Am.Chem.Soc., 132, 2010
3QFJ
DownloadVisualize
BU of 3qfj by Molmil
The complex between TCR A6 and human Class I MHC HLA-A2 with the modified TAX (Y5F) peptide
Descriptor: A6 alpha chain, A6 beta chain, Beta-2-microglobulin, ...
Authors:Borbulevych, O.Y, Baker, B.M.
Deposit date:2011-01-21
Release date:2012-01-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Disparate degrees of hypervariable loop flexibility control T-cell receptor cross-reactivity, specificity, and binding mechanism.
J.Mol.Biol., 414, 2011

222624

數據於2024-07-17公開中

PDB statisticsPDBj update infoContact PDBjnumon