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8PTL
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BU of 8ptl by Molmil
human PHOX2B C-terminal domain including the polyA fragment at 278K
Descriptor: Paired mesoderm homeobox protein 2B
Authors:Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
Deposit date:2023-07-14
Release date:2024-03-13
Method:SOLUTION NMR
Cite:Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
8PUI
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BU of 8pui by Molmil
human PHOX2B C-terminal domain including the polyA fragment at 298K
Descriptor: Paired mesoderm homeobox protein 2B
Authors:Anton, R, Trevino, M.A, Pantoja-Uceda, D, Felix, S, Babu, M, Cabrita, E.J, Zweckstetter, M, Tinnefeld, P, Vera, A.M, Oroz, J.
Deposit date:2023-07-17
Release date:2024-03-13
Method:SOLUTION NMR
Cite:Alternative low-populated conformations prompt phase transitions in polyalanine repeat expansions.
Nat Commun, 15, 2024
5U1F
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BU of 5u1f by Molmil
Initial contact of HIV-1 Env with CD4: Cryo-EM structure of BG505 DS-SOSIP trimer in complex with CD4 and antibody PGT145
Descriptor: BG505 DS-SOSIP gp120, BG505 SOSIP gp41, PGT145 heavy chain, ...
Authors:Acharya, P, Kwong, P.D, Potter, C.S, Carragher, B.
Deposit date:2016-11-28
Release date:2017-02-22
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Quaternary contact in the initial interaction of CD4 with the HIV-1 envelope trimer.
Nat. Struct. Mol. Biol., 24, 2017
5TVT
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BU of 5tvt by Molmil
Structure of Maternal Embryonic Leucine Zipper Kinase
Descriptor: 9-(3,5-dichloro-4-hydroxyphenyl)-1-{trans-4-[(dimethylamino)methyl]cyclohexyl}-3-methyl-3,4-dihydropyrimido[5,4-c][1,5]naphthyridin-2(1H)-one, Maternal embryonic leucine zipper kinase
Authors:Seo, H.-Y, Huang, H, Gray, N.S, Dhe-Paganon, S.
Deposit date:2016-11-10
Release date:2017-11-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of Maternal Embryonic Leucine Zipper Kinase
To Be Published
1DN9
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BU of 1dn9 by Molmil
STRUCTURE OF AN ALTERNATING-B DNA HELIX AND ITS RELATIONSHIP TO A-TRACT DNA
Descriptor: DNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*TP*GP*CP*G)-3')
Authors:Yoon, C, Dickerson, R.E.
Deposit date:1989-04-25
Release date:1990-04-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of an alternating-B DNA helix and its relationship to A-tract DNA.
Proc.Natl.Acad.Sci.USA, 85, 1988
3Q6G
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BU of 3q6g by Molmil
Crystal structure of Fab of rhesus mAb 2.5B specific for quaternary neutralizing epitope of HIV-1 gp120
Descriptor: Heavy chain of Fab of rhesus mAb 2.5B, Light chain of Fab of rhesus mAb 2.5B
Authors:Spurrier, B, Sampson, J, Totrov, M, Li, H, O'Neal, T, William, C, Robinson, J, Gorny, M.K, Zolla-Pazner, S, Kong, X.P.
Deposit date:2010-12-31
Release date:2011-05-25
Last modified:2013-03-20
Method:X-RAY DIFFRACTION (1.902 Å)
Cite:Structural Analysis of Human and Macaque mAbs 2909 and 2.5B: Implications for the Configuration of the Quaternary Neutralizing Epitope of HIV-1 gp120.
Structure, 19, 2011
4IZJ
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BU of 4izj by Molmil
Crystal structure of yellowtail ascites virus VP4 protease with a wild-type active site reveals acyl-enzyme complexes and product complexes.
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Paetzel, M, Chung, I.Y.W.
Deposit date:2013-01-30
Release date:2013-02-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
4IZK
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BU of 4izk by Molmil
Crystal structure of yellowtail ascites virus VP4 protease active site mutant (K674A) reveals both an acyl-enzyme complex and an empty active site
Descriptor: BETA-MERCAPTOETHANOL, MAGNESIUM ION, Yellowtail Ascites Virus (YAV) VP4 protease
Authors:Paetzel, M, Chung, I.Y.W.
Deposit date:2013-01-30
Release date:2013-02-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Yellowtail Ascites Virus VP4 Protease: TRAPPING AN INTERNAL CLEAVAGE SITE TRANS ACYL-ENZYME COMPLEX IN A NATIVE SER/LYS DYAD ACTIVE SITE.
J.Biol.Chem., 288, 2013
4FMZ
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BU of 4fmz by Molmil
Crystal structure of an internalin (inlF) from Listeria monocytogenes str. 4b F2365 at 1.91 A resolution
Descriptor: 1,2-ETHANEDIOL, Internalin
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-06-18
Release date:2012-07-25
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of an internalin (inlF) from Listeria monocytogenes str. 4b F2365 at 1.91 A resolution
To be published
3Q6F
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BU of 3q6f by Molmil
Crystal structure of Fab of human mAb 2909 specific for quaternary neutralizing epitope of HIV-1 gp120
Descriptor: DI(HYDROXYETHYL)ETHER, Heavy chain of Fab of human mAb 2909, Light chain of Fab of human mAb 2909
Authors:Spurrier, B, Sampson, J, Totrov, M, Li, H, O'Neal, T, William, C, Robinson, J, Gorny, M.K, Zolla-Pazner, S, Kong, X.P.
Deposit date:2010-12-31
Release date:2011-05-25
Last modified:2011-10-12
Method:X-RAY DIFFRACTION (3.192 Å)
Cite:Structural Analysis of Human and Macaque mAbs 2909 and 2.5B: Implications for the Configuration of the Quaternary Neutralizing Epitope of HIV-1 gp120.
Structure, 19, 2011
1D0K
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BU of 1d0k by Molmil
THE ESCHERICHIA COLI LYTIC TRANSGLYCOSYLASE SLT35 IN COMPLEX WITH TWO MURODIPEPTIDES (GLCNAC-MURNAC-L-ALA-D-GLU)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE, ALANINE, ...
Authors:van Asselt, E.J, Kalk, K.H, Dijkstra, B.W.
Deposit date:1999-09-12
Release date:2000-03-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystallographic studies of the interactions of Escherichia coli lytic transglycosylase Slt35 with peptidoglycan.
Biochemistry, 39, 2000
4CZQ
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BU of 4czq by Molmil
Crystal structure of the extralong fungal manganese peroxidase from Ceriporiopsis subvermispora in complex with cadmium
Descriptor: CADMIUM ION, CALCIUM ION, EXTRALONG MANGANESE PEROXIDASE, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2014-04-21
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.198 Å)
Cite:Structural Implications of the C-Terminal Tail in the Catalytic and Stability Properties of Manganese Peroxidases from Ligninolytic Fungi
Acta Crystallogr.,Sect.D, 70, 2014
3MAC
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BU of 3mac by Molmil
crystal structure of GP41-derived protein complexed with fab 8062
Descriptor: Fab8062, Transmembrane glycoprotein
Authors:Li, M, Gustchina, E, Louis, J, Gustchina, A, Wlodawer, A, Clore, M.
Deposit date:2010-03-23
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis of HIV-1 Neutralization by Affinity Matured Fabs Directed against the Internal Trimeric Coiled-Coil of gp41.
Plos Pathog., 6, 2010
4CZN
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BU of 4czn by Molmil
Crystal structure of the extralong fungal manganese peroxidase from Ceriporiopsis subvermispora
Descriptor: CALCIUM ION, EXTRALONG MANGANESE PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2014-04-21
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:Structural Implications of the C-Terminal Tail in the Catalytic and Stability Properties of Manganese Peroxidases from Ligninolytic Fungi
Acta Crystallogr.,Sect.D, 70, 2014
4CZR
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BU of 4czr by Molmil
Crystal structure of the extralong fungal manganese peroxidase from Ceriporiopsis subvermispora in complex with cadmium (anomalous data)
Descriptor: CADMIUM ION, CALCIUM ION, EXTRALONG MANGANESE PEROXIDASE, ...
Authors:Medrano, F.J, Romero, A.
Deposit date:2014-04-21
Release date:2014-12-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Structural Implications of the C-Terminal Tail in the Catalytic and Stability Properties of Manganese Peroxidases from Ligninolytic Fungi
Acta Crystallogr.,Sect.D, 70, 2014
145D
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BU of 145d by Molmil
Structure and thermodynamics of nonalternating C/G base pairs in Z-DNA: the 1.3 angstroms crystal structure of the asymmetric hexanucleotide D(M(5)CGGGM(5) CG)/D(M(5)CGCCM(5)CG)
Descriptor: DNA (5'-D(*(5CM)P*DGP*DGP*DGP*(5CM)P*DG)-3'), DNA (5'-D(*(MCY)P*GP*CP*CP*(5CM)P*G)-3'), DNA (5'-D(*(MCY)P*GP*GP*GP*(5CM)P*G)-3')
Authors:Schroth, G.P, Kagawa, T.F, Shing Ho, P.
Deposit date:1993-11-11
Release date:1994-01-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structure and thermodynamics of nonalternating C.G base pairs in Z-DNA: the 1.3-A crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG).d(m5CGCCm5CG).
Biochemistry, 32, 1993
3VCP
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BU of 3vcp by Molmil
The 2.2 Angstrom structure of Stc2 with proline bound in the active site
Descriptor: FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, PROLINE, ...
Authors:Daughtry, K.D, Xiao, Y, Stoner-Ma, D, Cho, E, Orville, A.M, Liu, P, Allen, K.N.
Deposit date:2012-01-04
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV-Visible Spectroscopic Analysis of a Rieske-Type Demethylase.
J.Am.Chem.Soc., 134, 2012
6PI9
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BU of 6pi9 by Molmil
Crystal structure of 16S rRNA methyltransferase RmtF in complex with S-Adenosyl-L-homocysteine
Descriptor: 16S rRNA (guanine(1405)-N(7))-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Stogios, P.J, Kim, Y, Evdokimova, E, Di Leo, R, Semper, C, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-06-26
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of 16S rRNA methylase RmtF in complex with S-Adenosyl-L-homocysteine
To be Published
2C4J
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BU of 2c4j by Molmil
Human glutathione-S-transferase M2-2 T210S mutant in complex with glutathione-styrene oxide conjugate
Descriptor: GLUTATHIONE S-TRANSFERASE MU 2, L-GAMMA-GLUTAMYL-S-[(2S)-2-HYDROXY-2-PHENYLETHYL]-L-CYSTEINYLGLYCINE
Authors:Tars, K, Andersson, M, Ivarsson, Y, Olin, B, Mannervik, B.
Deposit date:2005-10-20
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Alternative Mutations of a Positively Selected Residue Elicit Gain or Loss of Functionalities in Enzyme Evolution.
Proc.Natl.Acad.Sci.USA, 103, 2006
3MA9
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BU of 3ma9 by Molmil
Crystal structure of gp41 derived protein complexed with fab 8066
Descriptor: Fab8066 FAB ANTIBODY FRAGMENT, Heavy Chain, Light Chain, ...
Authors:Li, M, Gustchina, E, Louis, J, Gustchina, A, Wlodawer, A, Clore, M.
Deposit date:2010-03-23
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Basis of HIV-1 Neutralization by Affinity Matured Fabs Directed against the Internal Trimeric Coiled-Coil of gp41.
Plos Pathog., 6, 2010
4H5E
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BU of 4h5e by Molmil
Crystal structure of human FPPS in ternary complex with YS0470 and isopentenyl pyrophosphate
Descriptor: Farnesyl pyrophosphate synthase, ISOPENTYL PYROPHOSPHATE, MAGNESIUM ION, ...
Authors:Park, J, Lin, Y.-S, Tsantrizos, Y.S, Berghuis, A.M.
Deposit date:2012-09-18
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Ternary complex structures of human farnesyl pyrophosphate synthase bound with a novel inhibitor and secondary ligands provide insights into the molecular details of the enzyme's active site closure.
Bmc Struct.Biol., 12, 2012
4APS
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BU of 4aps by Molmil
Crystal structure of a POT family peptide transporter in an inward open conformation.
Descriptor: CADMIUM ION, DI-OR TRIPEPTIDE H+ SYMPORTER
Authors:Solcan, N, Kwok, J, Fowler, P.W, Cameron, A.D, Drew, D, Iwata, S, Newstead, S.
Deposit date:2012-04-05
Release date:2012-06-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Alternating Access Mechanism in the Pot Family of Oligopeptide Transporters.
Embo J., 31, 2012
5D9F
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BU of 5d9f by Molmil
Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
Descriptor: 6-{[(1R,3S)-3-phenylcyclopentyl]amino}pyridine-3-carboxamide, tRNA (guanine-N(1)-)-methyltransferase
Authors:Elkins, P.A, Bonnette, W.G, Madauss, K.P.
Deposit date:2015-08-18
Release date:2016-08-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of TrmD, a M1G37 tRNA Methyltransferase with SAM-competitive compounds
To be published
3HZD
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BU of 3hzd by Molmil
Crystal structure of bothropstoxin-I (BthTX-I), a PLA2 homologue from Bothrops jararacussu venom
Descriptor: LITHIUM ION, Phospholipase A2 homolog bothropstoxin-1
Authors:Silva, M.C.O, Marchi-Salvador, D.P, Fernandes, C.A.H, Soares, A.M, Fontes, M.R.M.
Deposit date:2009-06-23
Release date:2009-07-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Comparison between apo and complexed structures of bothropstoxin-I reveals the role of Lys122 and Ca(2+)-binding loop region for the catalytically inactive Lys49-PLA(2)s.
J.Struct.Biol., 171, 2010
3I03
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BU of 3i03 by Molmil
Crystal structure of bothropstoxin-I chemically modified by p-bromophenacyl bromide (BPB) - monomeric form at a high resolution
Descriptor: ISOPROPYL ALCOHOL, Phospholipase A2 homolog bothropstoxin-1, p-Bromophenacyl bromide
Authors:Marchi-Salvador, D.P, Fernandes, C.A.H, Soares, A.M, Fontes, M.R.M.
Deposit date:2009-06-24
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Comparison between apo and complexed structures of bothropstoxin-I reveals the role of Lys122 and Ca(2+)-binding loop region for the catalytically inactive Lys49-PLA(2)s.
J.Struct.Biol., 171, 2010

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數據於2024-07-17公開中

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