Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6OT3
DownloadVisualize
BU of 6ot3 by Molmil
RF2 accommodated state bound Release complex 70S at 24 ms
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fu, Z, Indrisiunaite, G, Kaledhonkar, S, Shah, B, Sun, M, Chen, B, Grassucci, R.A, Ehrenberg, M, Frank, J.
Deposit date:2019-05-02
Release date:2019-06-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy.
Nat Commun, 10, 2019
6OST
DownloadVisualize
BU of 6ost by Molmil
RF2 pre-accommodated state bound Release complex 70S at 24ms
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fu, Z, Indrisiunaite, G, Kaledhonkar, S, Shah, B, Sun, M, Chen, B, Grassucci, R.A, Ehrenberg, M, Frank, J.
Deposit date:2019-05-02
Release date:2019-06-19
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy.
Nat Commun, 10, 2019
6OSQ
DownloadVisualize
BU of 6osq by Molmil
RF1 accommodated state bound Release complex 70S at long incubation time point
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fu, Z, Indrisiunaite, G, Kaledhonkar, S, Shah, B, Sun, M, Chen, B, Grassucci, R.A, Ehrenberg, M, Frank, J.
Deposit date:2019-05-02
Release date:2019-06-26
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The structural basis for release-factor activation during translation termination revealed by time-resolved cryogenic electron microscopy.
Nat Commun, 10, 2019
4V5J
DownloadVisualize
BU of 4v5j by Molmil
Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
Descriptor: 16S Ribosomal RNA, 23S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Jin, H, Kelley, A.C, Loakes, D, Ramakrishnan, V.
Deposit date:2010-03-24
Release date:2014-07-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.
Proc. Natl. Acad. Sci. U.S.A., 107, 2010
6K3N
DownloadVisualize
BU of 6k3n by Molmil
Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with BPA-monoF
Descriptor: 2-fluoranyl-4-[2-(4-hydroxyphenyl)propan-2-yl]phenol, Estrogen-related receptor gamma
Authors:Matsushima, A, Nose, T, Kakuta, Y.
Deposit date:2019-05-21
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Evaluation of the Influence of Halogenation on the Binding of Bisphenol A to the Estrogen-Related Receptor gamma.
Chem.Res.Toxicol., 33, 2020
5TGC
DownloadVisualize
BU of 5tgc by Molmil
Structure of the hetero-trimer of Rtt102-Arp7/9 bound to ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
Authors:Turegun, B, Dominguez, R.
Deposit date:2016-09-27
Release date:2017-09-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.245 Å)
Cite:Actin-related proteins regulate the RSC chromatin remodeler by weakening intramolecular interactions of the Sth1 ATPase.
Commun Biol, 1, 2018
4RL9
DownloadVisualize
BU of 4rl9 by Molmil
Crystal structure of Acinetobacter baumannii CarO1
Descriptor: Carbapenem-associated resistance protein
Authors:Zahn, M, Basle, A, van den Berg, B.
Deposit date:2014-10-16
Release date:2015-04-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Small-Molecule Transport by CarO, an Abundant Eight-Stranded beta-Barrel Outer Membrane Protein from Acinetobacter baumannii.
J.Mol.Biol., 427, 2015
4RLB
DownloadVisualize
BU of 4rlb by Molmil
Crystal structure of Acinetobacter baumannii CarO2
Descriptor: Carbapenem-associated resistance protein
Authors:Zahn, M, Basle, A, van den Berg, B.
Deposit date:2014-10-16
Release date:2015-04-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Small-Molecule Transport by CarO, an Abundant Eight-Stranded beta-Barrel Outer Membrane Protein from Acinetobacter baumannii.
J.Mol.Biol., 427, 2015
7O1Q
DownloadVisualize
BU of 7o1q by Molmil
Amyloid beta oligomer displayed on the alpha hemolysin scaffold
Descriptor: Alpha-hemolysin hybridized Abeta
Authors:Wu, J, Blum, T.B, Farrell, D.P, DiMaio, F, Abrahams, J.P, Luo, J.
Deposit date:2021-03-30
Release date:2021-04-14
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-electron Microscopy Imaging of Alzheimer's Amyloid-beta 42 Oligomer Displayed on a Functionally and Structurally Relevant Scaffold.
Angew.Chem.Int.Ed.Engl., 60, 2021
6JL9
DownloadVisualize
BU of 6jl9 by Molmil
Crystal structure of a frog ependymin related protein
Descriptor: CALCIUM ION, Ependymin-related 1
Authors:Park, S.Y.
Deposit date:2019-03-04
Release date:2019-07-10
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of three ependymin-related proteins suggest their function as a hydrophobic molecule binder.
Iucrj, 6, 2019
6LIT
DownloadVisualize
BU of 6lit by Molmil
Estrogen-related receptor beta(ERR2) in complex with BPA
Descriptor: 10-mer from Nuclear receptor coactivator 2, 4,4'-PROPANE-2,2-DIYLDIPHENOL, Steroid hormone receptor ERR2
Authors:Yao, B.Q, Li, Y.
Deposit date:2019-12-13
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into the Specificity of Ligand Binding and Coactivator Assembly by Estrogen-Related Receptor beta.
J.Mol.Biol., 432, 2020
5YSO
DownloadVisualize
BU of 5yso by Molmil
Crystal structure of Estrogen Related Receptor-3 (ERR-gamma) ligand binding domain with DN200434
Descriptor: 4-[5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
Authors:Cho, S.J, Chin, J.W, Yoon, H.S, Jeon, Y.H, Bae, J.H, Song, J.Y.
Deposit date:2017-11-14
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:A Novel Orally Active Inverse Agonist of Estrogen-related Receptor Gamma (ERR gamma ), DN200434, A Booster of NIS in Anaplastic Thyroid Cancer.
Clin.Cancer Res., 25, 2019
6LN4
DownloadVisualize
BU of 6ln4 by Molmil
Estrogen-related receptor beta(ERR2) in complex with PGC1a-2a
Descriptor: 10-mer from Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, Steroid hormone receptor ERR2
Authors:Yao, B.Q, Li, Y.
Deposit date:2019-12-28
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural Insights into the Specificity of Ligand Binding and Coactivator Assembly by Estrogen-Related Receptor beta.
J.Mol.Biol., 432, 2020
2LLX
DownloadVisualize
BU of 2llx by Molmil
Solution structure of the N-terminal domain of human polypeptide chain release factor eRF1
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Polshakov, V.I, Eliseev, B.D, Birdsall, B, Frolova, L.Y.
Deposit date:2011-11-18
Release date:2012-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and dynamics in solution of the stop codon decoding N-terminal domain of the human polypeptide chain release factor eRF1.
Protein Sci., 21, 2012
2GPV
DownloadVisualize
BU of 2gpv by Molmil
Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen and a SMRT peptide
Descriptor: 4-HYDROXYTAMOXIFEN, Estrogen-related receptor gamma, Nuclear receptor corepressor 2
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-18
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2GPP
DownloadVisualize
BU of 2gpp by Molmil
Estrogen Related Receptor-gamma ligand binding domain complexed with a RIP140 peptide and synthetic ligand GSK4716
Descriptor: 4-HYDROXY-N'-(4-ISOPROPYLBENZYL)BENZOHYDRAZIDE, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-18
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
2GPU
DownloadVisualize
BU of 2gpu by Molmil
Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen
Descriptor: 4-HYDROXYTAMOXIFEN, Estrogen-related receptor gamma
Authors:Wang, L, Zuercher, W.J, Consler, T.G, Lambert, M.H, Miller, A.B, Osband-Miller, L.A, McKee, D.D, Willson, T.M, Nolte, R.T.
Deposit date:2006-04-18
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structures of the estrogen-related receptor-gamma ligand binding domain in three functional states reveal the molecular basis of small molecule regulation.
J.Biol.Chem., 281, 2006
6EDV
DownloadVisualize
BU of 6edv by Molmil
Structure of a GNAT superfamily acetyltransferase PA3944 in complex with CoA
Descriptor: 1,2-ETHANEDIOL, Acetyltransferase PA3944, CALCIUM ION, ...
Authors:Majorek, K.A, Satchell, K.J.F, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-08-12
Release date:2018-12-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A Gcn5-Related N-Acetyltransferase (GNAT) Capable of Acetylating Polymyxin B and Colistin Antibiotics in Vitro.
Biochemistry, 57, 2018
6JLD
DownloadVisualize
BU of 6jld by Molmil
Crystal structure of a human ependymin related protein
Descriptor: Mammalian ependymin-related protein 1
Authors:Park, S.Y.
Deposit date:2019-03-05
Release date:2019-07-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of three ependymin-related proteins suggest their function as a hydrophobic molecule binder.
Iucrj, 6, 2019
6JLA
DownloadVisualize
BU of 6jla by Molmil
Crystal structure of a mouse ependymin related protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Mammalian ependymin-related protein 1
Authors:Park, S.
Deposit date:2019-03-04
Release date:2020-03-04
Last modified:2020-09-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of three ependymin-related proteins suggest their function as a hydrophobic molecule binder.
Iucrj, 6, 2019
2NV9
DownloadVisualize
BU of 2nv9 by Molmil
The X-ray Crystal Structure of the Paramecium bursaria Chlorella virus arginine decarboxylase
Descriptor: A207R protein, arginine decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Shah, R.H, Akella, R, Goldsmith, E, Phillips, M.A.
Deposit date:2006-11-11
Release date:2007-03-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:X-ray Structure of Paramecium bursaria Chlorella Virus Arginine Decarboxylase: Insight into the Structural Basis for Substrate Specificity.
Biochemistry, 46, 2007
2NVA
DownloadVisualize
BU of 2nva by Molmil
The X-ray crystal structure of the Paramecium bursaria Chlorella virus arginine decarboxylase bound to agmatine
Descriptor: (4-{[(4-{[AMINO(IMINO)METHYL]AMINO}BUTYL)AMINO]METHYL}-5-HYDROXY-6-METHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, arginine decarboxylase, A207R protein
Authors:Shah, R.H, Akella, R, Goldsmith, E, Phillips, M.A.
Deposit date:2006-11-11
Release date:2007-03-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray Structure of Paramecium bursaria Chlorella Virus Arginine Decarboxylase: Insight into the Structural Basis for Substrate Specificity.
Biochemistry, 46, 2007
7VT0
DownloadVisualize
BU of 7vt0 by Molmil
Dimer structure of SORLA
Descriptor: Sortilin-related receptor
Authors:Xi, Z, Cang, W, Chuang, L.
Deposit date:2021-10-27
Release date:2022-11-02
Last modified:2023-05-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures reveal distinct apo conformations of sortilin-related receptor SORLA.
Biochem.Biophys.Res.Commun., 600, 2022
5V4R
DownloadVisualize
BU of 5v4r by Molmil
Crystal structure of LARP1-unique domain DM15 bound to m7GTP
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, La-related protein 1
Authors:Berman, A.J, Lahr, R.M.
Deposit date:2017-03-10
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs.
Elife, 6, 2017
5V87
DownloadVisualize
BU of 5v87 by Molmil
Crystal structure of LARP1-unique domain DM15 bound to m7GpppC
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, La-related protein 1, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-9-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
Authors:Berman, A.J, Lahr, R.M.
Deposit date:2017-03-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.692 Å)
Cite:La-related protein 1 (LARP1) binds the mRNA cap, blocking eIF4F assembly on TOP mRNAs.
Elife, 6, 2017

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon