Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VV1
DownloadVisualize
BU of 6vv1 by Molmil
Crystal structure of Eis from Mycobacterium tuberculosis in complex with inhibitor SGT384
Descriptor: 2-[(4-amino-6,7-dihydro-5H-cyclopenta[4,5]thieno[2,3-d]pyrimidin-2-yl)sulfanyl]-N-[2-(piperidin-1-yl)ethyl]acetamide, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Punetha, A, Hou, C, Ngo, H.X, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2020-02-16
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-Guided Optimization of Inhibitors of Acetyltransferase Eis fromMycobacterium tuberculosis.
Acs Chem.Biol., 15, 2020
5VQE
DownloadVisualize
BU of 5vqe by Molmil
Beta-glucoside phosphorylase BglX bound to 2FGlc
Descriptor: 2-deoxy-2-fluoro-alpha-D-glucopyranose, Beta-glucoside phosphorylase BglX
Authors:Patel, A, Mark, B.L.
Deposit date:2017-05-08
Release date:2018-01-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.889 Å)
Cite:Structural and mechanistic analysis of a beta-glycoside phosphorylase identified by screening a metagenomic library.
J. Biol. Chem., 293, 2018
5IO5
DownloadVisualize
BU of 5io5 by Molmil
Unliganded form of bovine beta-lactoglobulin, ambient pressure
Descriptor: Beta-lactoglobulin, CHLORIDE ION
Authors:Kurpiewska, K, Biela, A.
Deposit date:2016-03-08
Release date:2016-03-16
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Investigation of high pressure effect on the structure and adsorption of beta-lactoglobulin.
Colloids Surf B Biointerfaces, 161, 2017
6VJR
DownloadVisualize
BU of 6vjr by Molmil
Oxygen tolerant Archeal 4hydroxybutyrylCoA dehydratase (4HBD) from N. maritimus
Descriptor: FE (III) ION, FLAVIN-ADENINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:DeMirci, H, Mathews, I.I, Wakatsuki, S, Kulakman, C.
Deposit date:2020-01-17
Release date:2021-01-27
Last modified:2025-08-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural adaptation of oxygen tolerance in a key archaeal carbon fixation enzyme
To Be Published
7MHP
DownloadVisualize
BU of 7mhp by Molmil
Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 298 K at high humidity
Descriptor: 3C-like proteinase, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.0005 Å)
Cite:The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro )
Iucrj, 9, 2022
2XYN
DownloadVisualize
BU of 2xyn by Molmil
HUMAN ABL2 IN COMPLEX WITH AURORA KINASE INHIBITOR VX-680
Descriptor: CHLORIDE ION, CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, SODIUM ION, ...
Authors:Salah, E, Ugochukwu, E, Elkins, J.M, Barr, A.J, Shrestha, B, Savitsky, P, Mahajan, P, Muniz, J.R.C, Yue, W.W, Chaikuad, A, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2010-11-18
Release date:2010-12-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal Structures of Abl-Related Gene (Abl2) in Complex with Imatinib, Tozasertib (Vx-680), and a Type I Inhibitor of the Triazole Carbothioamide Class.
J.Med.Chem., 54, 2011
5VRG
DownloadVisualize
BU of 5vrg by Molmil
Structural insights into lipoprotein N-acylation by Escherichia coli apolipoprotein N-acyltransferase
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apolipoprotein N-acyltransferase, CHLORIDE ION, ...
Authors:Murray, J.M, Noland, C.L.
Deposit date:2017-05-10
Release date:2017-07-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.518 Å)
Cite:Structural insights into lipoprotein N-acylation by Escherichia coli apolipoprotein N-acyltransferase.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7MKY
DownloadVisualize
BU of 7mky by Molmil
SARS-CoV-2 frameshifting pseudoknot RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COBALT HEXAMMINE(III), MAGNESIUM ION, ...
Authors:Jones, C.P, Ferre-D'Amare, A.R.
Deposit date:2021-04-27
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Crystal structure of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) frameshifting pseudoknot.
Rna, 28, 2022
5VDN
DownloadVisualize
BU of 5vdn by Molmil
1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase from Yersinia pestis in Complex with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Glutathione oxidoreductase, ...
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Cardona-Correa, A, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-04-03
Release date:2017-04-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:1.55 Angstrom Resolution Crystal Structure of Glutathione Reductase from Yersinia pestis in Complex with FAD.
To Be Published
6VWA
DownloadVisualize
BU of 6vwa by Molmil
C-terminal regulatory domain of the chloride transporter KCC-1 from C. elegans
Descriptor: DI(HYDROXYETHYL)ETHER, K+/Cl-Cotransporter, TETRAETHYLENE GLYCOL, ...
Authors:Zimanyi, C.M, Cheung, J.
Deposit date:2020-02-19
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Structure of the Regulatory Cytosolic Domain of a Eukaryotic Potassium-Chloride Cotransporter.
Structure, 28, 2020
5IOB
DownloadVisualize
BU of 5iob by Molmil
Crystal structure of beta-N-acetylglucosaminidase-like protein from Corynebacterium glutamicum
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-glucosidase-related glycosidases, CHLORIDE ION, ...
Authors:Chang, C, Mack, J, Endres, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-03-08
Release date:2016-03-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.252 Å)
Cite:Crystal structure of beta-N-acetylglucosaminidase-like protein from Corynebacterium glutamicum
To Be Published
7MTT
DownloadVisualize
BU of 7mtt by Molmil
Crystal structure of colibactin self-resistance protein ClbS in complex with two molecules of CHES
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Colibactin self-protection protein ClbS
Authors:Tripathi, P, Bruner, S.D.
Deposit date:2021-05-13
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for the Interactions of the Colibactin Resistance Gene Product ClbS with DNA.
Biochemistry, 60, 2021
7MKB
DownloadVisualize
BU of 7mkb by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Nyovanie, S.T, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-04-22
Release date:2021-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV-2 epitope YLQPRTFLL
To be Published
5VRX
DownloadVisualize
BU of 5vrx by Molmil
Human DNA polymerase beta pre-catalytic 8-oxoG:dC extension complex with dTTP bound in Watson-Crick conformation
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Reed, A.J, Suo, Z.
Deposit date:2017-05-11
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta.
J. Am. Chem. Soc., 139, 2017
5IOZ
DownloadVisualize
BU of 5ioz by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with N-(cyclopentylmethyl)cyclopentanecarboxamide at 2.02A resolution
Descriptor: N-(cyclopentylmethyl)cyclopentanecarboxamide, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5VG6
DownloadVisualize
BU of 5vg6 by Molmil
Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Xanthobacter autotrophicus Py2 in complex with NADPH and MES.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Lipowska, J, Shabalin, I.G, Kutner, J, Gasiorowska, O.A, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2017-04-10
Release date:2017-04-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of D-isomer specific 2-hydroxyacid dehydrogenase from Xanthobacter autotrophicus Py2 in complex with NADPH and MES.
to be published
5IP6
DownloadVisualize
BU of 5ip6 by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with N-((tetrahydrofuran-3-yl)methyl)pyrrolidine-1-carboxamide at 1.93A resolution
Descriptor: N-{[(3S)-oxolan-3-yl]methyl}pyrrolidine-1-carboxamide, TetR-family transcriptional regulatory repressor protein
Authors:Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
Deposit date:2016-03-09
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
5IP9
DownloadVisualize
BU of 5ip9 by Molmil
Structure of RNA Polymerase II-TFIIF complex
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Plaschka, C, Hantsche, M, Dienemann, C, Burzinski, C, Plitzko, J, Cramer, P.
Deposit date:2016-03-09
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Transcription initiation complex structures elucidate DNA opening.
Nature, 533, 2016
7MTL
DownloadVisualize
BU of 7mtl by Molmil
Crystal structure of colibactin self-resistance protein ClbS in complex with a dsDNA
Descriptor: Colibactin self-protection protein ClbS, DNA (5'-D(*AP*AP*TP*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*GP*AP*AP*GP*TP*GP*GP*GP*AP*AP*TP*T)-3')
Authors:Tripathi, P, Bruner, S.D.
Deposit date:2021-05-13
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.446 Å)
Cite:Structural Basis for the Interactions of the Colibactin Resistance Gene Product ClbS with DNA.
Biochemistry, 60, 2021
5VS0
DownloadVisualize
BU of 5vs0 by Molmil
Human DNA polymerase beta 8-oxoG:dC extension with dTTP after 80 s
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*AP*TP*GP*CP*GP*CP*CP*T)-3'), ...
Authors:Reed, A.J, Suo, Z.
Deposit date:2017-05-11
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta.
J. Am. Chem. Soc., 139, 2017
5VSE
DownloadVisualize
BU of 5vse by Molmil
Structure of human G9a SET-domain (EHMT2) in complex with inhibitor 17: N~2~-cyclopentyl-6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)quinazoline-2,4-diamine
Descriptor: Histone-lysine N-methyltransferase EHMT2, N~2~-cyclopentyl-6,7-dimethoxy-N~2~-methyl-N~4~-(1-methylpiperidin-4-yl)quinazoline-2,4-diamine, S-ADENOSYLMETHIONINE, ...
Authors:Babault, N, Xiong, Y, Liu, J, Jin, J.
Deposit date:2017-05-11
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-activity relationship studies of G9a-like protein (GLP) inhibitors.
Bioorg. Med. Chem., 25, 2017
7MHV
DownloadVisualize
BU of 7mhv by Molmil
Crystal Structure of Cysteine desulfurase NifS from Legionella pneumophila Philadelphia 1 in complex with pyridoxal 5'-phosphate
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase, PHOSPHATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-04-15
Release date:2021-05-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Cysteine desulfurase NifS from Legionella pneumophila Philadelphia 1 in complex with pyridoxal 5'-phosphate
to be published
6VNV
DownloadVisualize
BU of 6vnv by Molmil
Crystal structure of TYK2 kinase with compound 14
Descriptor: (1S,2S)-2-cyano-N-[(1S,5R)-3-(5-fluoro-2-{[1-(2-hydroxyethyl)-1H-pyrazol-4-yl]amino}pyrimidin-4-yl)-3-azabicyclo[3.1.0]hexan-1-yl]cyclopropane-1-carboxamide, Non-receptor tyrosine-protein kinase TYK2
Authors:Vajdos, F.F.
Deposit date:2020-01-29
Release date:2020-04-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design and optimization of a series of 4-(3-azabicyclo[3.1.0]hexan-3-yl)pyrimidin-2-amines: Dual inhibitors of TYK2 and JAK1.
Bioorg.Med.Chem., 28, 2020
7ZWF
DownloadVisualize
BU of 7zwf by Molmil
Pfs48/45 bound to scFv fragment of monoclonal antibody 32F3
Descriptor: 32F3scFv, Gametocyte surface protein P45/48, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Ko, K.T, Lennartz, F.L, Higgins, M.K.
Deposit date:2022-05-19
Release date:2022-06-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.132 Å)
Cite:Structure of the malaria vaccine candidate Pfs48/45 and its recognition by transmission blocking antibodies.
Nat Commun, 13, 2022
5IQL
DownloadVisualize
BU of 5iql by Molmil
Crystal structure of YEATS2 YEATS bound to H3K27cr peptide
Descriptor: Histone H3.1, YEATS domain-containing protein 2
Authors:Li, H, Zhao, D, Guan, H.
Deposit date:2016-03-11
Release date:2016-07-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:YEATS2 is a selective histone crotonylation reader.
Cell Res., 26, 2016

243531

數據於2025-10-22公開中

PDB statisticsPDBj update infoContact PDBjnumon