PDB: 1466 resultsInfo pagesStatus searchChemie searchBIRD

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2LD9	Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCs Descriptor: Ubiquitin Authors: Kumar, D, Hosur, R. Deposit date: 2011-05-18 Release date: 2011-06-08 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: AUTOBA: Automation of Backbone Assignment from HN(C)N Suite of Experiments To be Published
2L3Z	Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin Descriptor: Ubiquitin Authors: Huber, M, Hiller, S, Schanda, P, Ernst, M, Bockmann, A, Verel, R, Meier, B.H. Deposit date: 2010-09-27 Release date: 2011-02-16 Last modified: 2024-05-01 Method: SOLID-STATE NMR Cite: A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination. Chemphyschem, 12, 2011
2L7R	Solution NMR structure of N-terminal Ubiquitin-like domain of FUBI, a ribosomal protein S30 precursor from Homo sapiens. NorthEast Structural Genomics consortium (NESG) target HR6166 Descriptor: Ubiquitin-like protein FUBI Authors: Lemak, A, Yee, A, Houliston, S, Semesi, A, Doherty, R, Dhe-Paganon, S, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC) Deposit date: 2010-12-20 Release date: 2011-01-05 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution NMR structure of N-terminal Ubiquitin-like domain of FUBI, a ribosomal protein S30 precursor from Homo sapiens. NorthEast Structural Genomics consortium (NESG) target HR6166 To be Published
2LGD	The high resolution structure of ubiquitin like domain of UBLCP1 Descriptor: Ubiquitin-like domain-containing CTD phosphatase 1 Authors: Lee, W, Ko, S. Deposit date: 2011-07-25 Release date: 2012-08-29 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The High Resolution Structure of Ubiquitin Like Dom Ublcp1 To be Published
2M8S	NMR Structure of the Cytoplasmic Tail of the Membrane Form of Heparin-binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-associated Athanogene 1 from Mus musculus (mBAG-1-UBH) Descriptor: BAG family molecular chaperone regulator 1, Proheparin-binding EGF-like growth factor Authors: Huang, H.W, Yu, C. Deposit date: 2013-06-03 Release date: 2014-04-16 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Nuclear Magnetic Resonance Structure of the Cytoplasmic Tail of Heparin Binding EGF-like Growth Factor (proHB-EGF-CT) Complexed with the Ubiquitin Homology Domain of Bcl-2-Associated Athanogene 1 from Mus musculus (mBAG-1-UBH). Biochemistry, 53, 2014
2J7Q	Crystal structure of the ubiquitin-specific protease encoded by murine cytomegalovirus tegument protein M48 in complex with a ubquitin-based suicide substrate Descriptor: GLYCEROL, MAGNESIUM ION, MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPECIFIC PROTEASE, ... Authors: Schlieker, C, Weihofen, W.A, Frijns, E, Kattenhorn, L.M, Gaudet, R, Ploegh, H.L. Deposit date: 2006-10-16 Release date: 2007-03-20 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of a Herpesvirus-Encoded Cysteine Protease Reveals a Unique Class of Deubiquitinating Enzymes Mol.Cell, 25, 2007
2MJ5	Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin Descriptor: Next to BRCA1 gene 1 protein, Polyubiquitin-C Authors: Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M. Deposit date: 2013-12-25 Release date: 2014-04-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin. J.Biol.Chem., 289, 2014
2JF5	crystal structure of Lys63-linked di-ubiquitin Descriptor: CADMIUM ION, CHLORIDE ION, COBALT (II) ION, ... Authors: Komander, D, Odenwaelder, P, Barford, D. Deposit date: 2007-01-26 Release date: 2008-02-05 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains. Embo Rep., 10, 2009
2M17	ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) Descriptor: Ubiquitin-like domain-containing CTD phosphatase 1 Authors: Lee, W, Yun, J. Deposit date: 2012-11-19 Release date: 2013-06-05 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase. Plos One, 8, 2013
2MRE	NMR structure of the Rad18-UBZ/ubiquitin complex Descriptor: E3 ubiquitin-protein ligase RAD18, Polyubiquitin-C, ZINC ION Authors: Rizzo, A.A, Salerno, P.E, Bezsonova, I, Korzhnev, D.M. Deposit date: 2014-07-03 Release date: 2014-10-22 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: NMR Structure of the Human Rad18 Zinc Finger in Complex with Ubiquitin Defines a Class of UBZ Domains in Proteins Linked to the DNA Damage Response. Biochemistry, 53, 2014
2MOR	A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar couplings Descriptor: Ubiquitin Authors: Camilloni, C, Vendruscolo, M. Deposit date: 2014-04-29 Release date: 2014-06-25 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: A Tensor-Free Method for the Structural and Dynamical Refinement of Proteins using Residual Dipolar Couplings. J.Phys.Chem.B, 119, 2015
2N4F	EC-NMR Structure of Arabidopsis thaliana At2g32350 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target AR3433A Descriptor: uncharacterized protein AR3433A Authors: Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) Deposit date: 2015-06-17 Release date: 2015-07-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Protein structure determination by combining sparse NMR data with evolutionary couplings. Nat.Methods, 12, 2015
2N2K	Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand Descriptor: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin Authors: Liu, Z, Gong, Z, Tang, C. Deposit date: 2015-05-10 Release date: 2015-07-08 Last modified: 2015-09-23 Method: SOLUTION NMR Cite: Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition. Elife, 4, 2015
2K25	Automated NMR Structure of the UBB by FAPSY Descriptor: UBB Authors: Lee, W, Jung, J, Lee, W. Deposit date: 2008-03-24 Release date: 2008-09-30 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: The Automated Suite for Protein Structure by NMR Spectroscopy To be Published
2K39	Recognition dynamics up to microseconds revealed from RDC derived ubiquitin ensemble in solution Descriptor: Ubiquitin Authors: Lange, O.F, Lakomek, N.A, Fares, C, Schroder, G, Walter, K, Becker, S, Meiler, J, Grubmuller, H, Griesinger, C, de Groot, B.L. Deposit date: 2008-04-25 Release date: 2008-06-24 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution. Science, 320, 2008
2MWS	Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1 Descriptor: DNA damage-inducible protein 1, Ubiquitin Authors: Fushman, D, Nowicka, U, Walker, O. Deposit date: 2014-11-23 Release date: 2015-03-25 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin. Structure, 23, 2015
2JWZ	Mutations in the hydrophobic core of ubiquitin differentially affect its recognition by receptor proteins Descriptor: Ubiquitin Authors: Haririnia, A, Verma, R, Purohit, N, Twarog, M, Deshaies, R, Bolon, D, Fushman, D. Deposit date: 2007-10-31 Release date: 2008-01-08 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Mutations in the hydrophobic core of ubiquitin differentially affect its recognition by receptor proteins. J.Mol.Biol., 375, 2008
2JZZ	Solid-State NMR Structure of Microcrystalline Ubiquitin Descriptor: Ubiquitin Authors: Manolikas, T, Herrmann, T, Meier, B.H. Deposit date: 2008-01-22 Release date: 2008-03-25 Last modified: 2024-05-08 Method: SOLID-STATE NMR Cite: Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy. J.Am.Chem.Soc., 130, 2008
2NBD	Solution structure of V26A mutant of Ubiquitin at pH 6.0 Descriptor: entity Authors: Surana, P, Das, R. Deposit date: 2016-02-04 Release date: 2016-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR Protein Sci., 25, 2016
2NBU	Solution structure of the Rad23 ubiquitin-like (UBL) domain Descriptor: UV excision repair protein RAD23 Authors: Chen, X, Walters, K.J. Deposit date: 2016-03-12 Release date: 2016-07-20 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome. Structure, 24, 2016
2NBE	Solution structure of V26A mutant of Ubiquitin at pH 2.0 Descriptor: entity Authors: Surana, P, Das, R. Deposit date: 2016-02-04 Release date: 2016-05-18 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR Protein Sci., 25, 2016
2N7K	Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 Descriptor: NEDD8, Protein KHNYN Authors: Santonico, E, Nepravishta, R, Mattioni, A, Valentini, E, Mandaliti, W, Procopio, R, Iannuccelli, M, Castagnoli, L, Polo, S, Paci, M, Cesareni, G. Deposit date: 2015-09-14 Release date: 2016-09-14 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 To be Published
2L0F	Solution NMR structure of human polymerase iota UBM2 (P692A mutant) in complex with ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Cui, G, Benirschke, R, Mer, G. Deposit date: 2010-07-01 Release date: 2010-11-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
2LRW	Solution structure of a ubiquitin-like protein from Trypanosoma brucei Descriptor: Ubiquitin, putative Authors: Wang, R, Wang, T, Liao, S, Zhang, J, Tu, X. Deposit date: 2012-04-13 Release date: 2013-04-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of a ubiqutin-like protein from Trypanosoma bucei To be Published
2LJ5	Description of the Structural fluctuations of proteins from structure-based calculations of Residual dipolar couplings Descriptor: Ubiquitin Authors: De Simone, A, Montalvao, R, Vendruscolo, M. Deposit date: 2011-09-06 Release date: 2012-07-18 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Determination of structural fluctuations of proteins from structure-based calculations of residual dipolar couplings. J.Biomol.Nmr, 53, 2012

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