PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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7YIB	Crystal structure of wild-type Cap4 SAVED domain-containing receptor from Enterobacter cloacae Descriptor: CD-NTase-associated protein 4, CHLORIDE ION Authors: Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y. Deposit date: 2022-07-15 Release date: 2023-05-31 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Specific recognition of cyclic oligonucleotides by Cap4 for phage infection. Int.J.Biol.Macromol., 237, 2023
7YIA	Crystal structure of K74A mutant of Cap4 SAVED domain-containing receptor from Enterobacter cloacae Descriptor: CD-NTase-associated protein 4, MAGNESIUM ION Authors: Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y. Deposit date: 2022-07-15 Release date: 2023-05-31 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.428 Å) Cite: Specific recognition of cyclic oligonucleotides by Cap4 for phage infection. Int.J.Biol.Macromol., 237, 2023
3P9N	Rv2966c of M. tuberculosis is a RsmD-like methyltransferase Descriptor: ACETATE ION, POSSIBLE METHYLTRANSFERASE (METHYLASE) Authors: Kumar, A, Malhotra, K, Saigal, K, Sinha, K.M, Taneja, B. Deposit date: 2010-10-18 Release date: 2011-04-06 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural and functional characterization of Rv2966c protein reveals an RsmD-like methyltransferase from Mycobacterium tuberculosis and the role of its N-terminal domain in target recognition J.Biol.Chem., 286, 2011
3OPT	Crystal structure of the Rph1 catalytic core with a-ketoglutarate Descriptor: 2-OXOGLUTARIC ACID, DNA damage-responsive transcriptional repressor RPH1, NICKEL (II) ION Authors: Chang, Y, Wu, J, Tong, X, Zhou, J, Ding, J. Deposit date: 2010-09-02 Release date: 2010-12-22 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of the catalytic core of Saccharomyces cerevesiae histone demethylase Rph1: insights into the substrate specificity and catalytic mechanism Biochem.J., 433, 2011
267D	STRUCTURAL STUDIES ON NUCLEIC ACIDS Descriptor: DISTAMYCIN A, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3'), MAGNESIUM ION Authors: Partridge, B.L, Salisbury, S.A. Deposit date: 1996-07-12 Release date: 1996-08-28 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: To be Published, 1996
1Z7F	Crystal structure of 16 base pair RNA duplex containing a C-A mismatch Descriptor: 5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', STRONTIUM ION Authors: Gherghe, C.M, Krahn, J.M, Weeks, K.M. Deposit date: 2005-03-24 Release date: 2005-10-18 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA. J.Am.Chem.Soc., 127, 2005
8VHN	Crystal Structure of E. coli class Ia ribonucleotide reductase alpha subunit bound to two ATP molecules Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (2.62 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
8VHO	Crystal Structure of E. coli class Ia ribonucleotide reductase alpha subunit bound to dATP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (2.548 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
8VHQ	Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and ATP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (3.4 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
8VHU	Crystal structure of dATP bound E. coli class Ia ribonucleotide reductase alpha construct fused with the C-terminal tail of E. coli class Ia beta subunit Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CHLORIDE ION, Fusion protein of Ribonucleoside-diphosphate reductase 1 subunits alpha and beta, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (2.1 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
4LEU	Crystal Structure of THA8-like protein from Arabidopsis thaliana Descriptor: Pentatricopeptide repeat-containing protein At3g46870 Authors: Ke, J, Chen, R.Z, Ban, T, Brunzelle, J.S, Gu, X, Kang, Y, Melcher, K, Zhu, J.K, Xu, H.E. Deposit date: 2013-06-26 Release date: 2013-09-25 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of a PLS-class Pentatricopeptide Repeat Protein Provides Insights into Mechanism of RNA Recognition. J.Biol.Chem., 288, 2013
1E2G	Human thymidylate kinase complexed with ADP, TDP and a magnesium-ion Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-DIPHOSPHATE, ... Authors: Ostermann, N, Schlichting, I, Brundiers, R, Konrad, M, Reinstein, J, Veit, T, Goody, R.S, Lavie, A. Deposit date: 2000-05-22 Release date: 2001-05-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure, 8, 2000
1E2D	Human thymidylate kinase complexed with thymidine monophosphate, adenosine diphosphate and a magnesium-ion Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ... Authors: Ostermann, N, Schlichting, I, Brundiers, R, Konrad, M, Reinstein, J, Veit, T, Goody, R.S, Lavie, A. Deposit date: 2000-05-22 Release date: 2001-05-17 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure, 8, 2000
8VHR	Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and GTP Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (3.55 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
8VHP	Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to CDP and two molecules of ATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Funk, M.A, Zimanyi, C.M, Drennan, C.L. Deposit date: 2024-01-02 Release date: 2024-09-04 Method: X-RAY DIFFRACTION (2.608 Å) Cite: How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase. Biochemistry, 2024
6HLK	Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit. Descriptor: Redirecting phage packaging protein C (RppC) Authors: Penades, J.R, Bacarizo, J, Marina, A, Alqasmi, M, Fillol-Salom, A, Roszak, A.W, Ciges-Tomas, J.R. Deposit date: 2018-09-11 Release date: 2019-07-31 Last modified: 2019-09-18 Method: X-RAY DIFFRACTION (2.42 Å) Cite: Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit. Mol.Cell, 75, 2019
1E2E	Human thymidylate kinase complexed with thymidine monophosphate, adenosine diphosphate,a magnesium-ion and ALf3 Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ... Authors: Ostermann, N, Schlichting, I, Brundiers, R, Konrad, M, Reinstein, J, Veit, T, Goody, R.S, Lavie, A. Deposit date: 2000-05-22 Release date: 2001-05-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure, 8, 2000
1E2Q	Human thymidylate kinase complexed with TP5A and a magnesium-ion Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, THYMIDINE-5'-PHOSPHATE, ... Authors: Ostermann, N, Schlichting, I, Brundiers, R, Konrad, M, Reinstein, J, Veit, T, Goody, R.S, Lavie, A. Deposit date: 2000-05-23 Release date: 2001-05-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure, 8, 2000
6HU8	Apo form of the competence regulator ComR from Streptococcus vestibularis Descriptor: Transcriptional regulator ComR Authors: Nessler, S, Thuillier, J, Ledesma, L, Hols, P. Deposit date: 2018-10-05 Release date: 2019-10-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.894 Å) Cite: Molecular dissection of pheromone selectivity in the competence signaling system ComRS of streptococci. Proc.Natl.Acad.Sci.USA, 117, 2020
1E2F	Human thymidylate kinase complexed with thymidine monophosphate, adenosine diphosphate and a magnesium-ion Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Ostermann, N, Schlichting, I, Brundiers, R, Konrad, M, Reinstein, J, Veit, T, Goody, R.S, Lavie, A. Deposit date: 2000-05-22 Release date: 2001-05-17 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Insights Into the Phosphoryltransfer Mechanism of Human Thymidylate Kinase Gained from Crystal Structures of Enzyme Complexes Along the Reaction Coordinate Structure, 8, 2000
4MQ3	The 1.1 Angstrom Structure of Catalytic Core Domain of FIV Integrase Descriptor: Integrase Authors: Galilee, M, Alian, A. Deposit date: 2013-09-15 Release date: 2014-09-17 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.08 Å) Cite: Identification of phe187 as a crucial dimerization determinant facilitates crystallization of a monomeric retroviral integrase core domain. Structure, 22, 2014
4N0L	Methanopyrus kandleri Csm3 crystal structure Descriptor: Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain, ZINC ION Authors: Hrle, A, Su, A.A, Ebert, J, Benda, C, Conti, E, Randau, L. Deposit date: 2013-10-02 Release date: 2013-11-13 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.37 Å) Cite: Structure and RNA-binding properties of the Type III-A CRISPR-associated protein Csm3. Rna Biol., 10, 2013
1HAR	2.2 ANGSTROMS RESOLUTION STRUCTURE OF THE AMINO-TERMINAL HALF OF HIV-1 REVERSE TRANSCRIPTASE (FINGERS AND PALM SUBDOMAINS) Descriptor: HIV-1 REVERSE TRANSCRIPTASE (FINGERS AND PALM SUBDOMAINS) Authors: Unge, T, Knight, S, Strandberg, B. Deposit date: 1994-10-28 Release date: 1995-04-20 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: 2.2 A resolution structure of the amino-terminal half of HIV-1 reverse transcriptase (fingers and palm subdomains). Structure, 2, 1994
6HUA	the competence regulator ComR from Streptococcus vestibularis in complex with its cognate signaling peptide XIP Descriptor: Uncharacterized protein, XIP signaling peptide Authors: Nessler, S, Thuillier, J, Ledesma, L, Hols, P. Deposit date: 2018-10-05 Release date: 2019-10-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.389 Å) Cite: Molecular dissection of pheromone selectivity in the competence signaling system ComRS of streptococci. Proc.Natl.Acad.Sci.USA, 117, 2020
1D2E	CRYSTAL STRUCTURE OF MITOCHONDRIAL EF-TU IN COMPLEX WITH GDP Descriptor: ELONGATION FACTOR TU (EF-TU), GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Andersen, G.R, Thirup, S, Spremulli, L.L, Nyborg, J. Deposit date: 1999-09-23 Release date: 1999-09-28 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.94 Å) Cite: High resolution crystal structure of bovine mitochondrial EF-Tu in complex with GDP. J.Mol.Biol., 297, 2000

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