Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V2M
DownloadVisualize
BU of 4v2m by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 34 MGy, focused in disulfide bonds.
Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ...
Authors:Campos-Acevedo, A.A, Rudino-Pinera, E.
Deposit date:2014-10-10
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.841 Å)
Cite:Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
8P0M
DownloadVisualize
BU of 8p0m by Molmil
Crystal structure of TEAD3 in complex with IAG933
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 4-[(2~{S})-5-chloranyl-6-fluoranyl-2-phenyl-2-[(2~{S})-pyrrolidin-2-yl]-3~{H}-1-benzofuran-4-yl]-5-fluoranyl-6-(2-hydroxyethyloxy)-~{N}-methyl-pyridine-3-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Scheufler, C, Villard, F, Chau, S.
Deposit date:2023-05-10
Release date:2024-04-10
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Direct and selective pharmacological disruption of the YAP-TEAD interface by IAG933 inhibits Hippo-dependent and RAS-MAPK-altered cancers.
Nat Cancer, 5, 2024
4V2N
DownloadVisualize
BU of 4v2n by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 85 MGy, focused in disulfide bonds
Descriptor: ACETATE ION, SULFATE ION, THIOREDOXIN
Authors:Campos-Acevedo, A.A, Rudino-Pinera, E.
Deposit date:2014-10-10
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
5B5Q
DownloadVisualize
BU of 5b5q by Molmil
1.7 Angstroms structure of ChlaDub1 from Chlamydia Trachomatis
Descriptor: CHLORIDE ION, Membrane thiol protease
Authors:Ramirez, Y.A, Kisker, C, Sauer, F.
Deposit date:2016-05-13
Release date:2017-03-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Chlamydia trachomatis-containing vacuole serves as deubiquitination platform to stabilize Mcl-1 and to interfere with host defense
Elife, 6, 2017
7PUX
DownloadVisualize
BU of 7pux by Molmil
Structure of p97 N-D1(L198W) in complex with Fragment TROLL2
Descriptor: (1S)-2-amino-1-(4-bromophenyl)ethan-1-ol, ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Bothe, S, Schindelin, H.
Deposit date:2021-10-01
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Fragment screening using biolayer interferometry reveals ligands targeting the SHP-motif binding site of the AAA+ ATPase p97
Commun Chem, 5, 2022
2HOT
DownloadVisualize
BU of 2hot by Molmil
Phage selected homeodomain bound to modified DNA
Descriptor: 3-PROP-2-YN-1-YL-1,3-OXAZOLIDIN-2-ONE, 5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*CP*CP*GP*GP*A)-3', ...
Authors:Feldman, M.E, Simon, M.D, Shokat, K.M.
Deposit date:2006-07-16
Release date:2006-12-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure and properties of a re-engineered homeodomain protein-DNA interface.
Acs Chem.Biol., 1, 2006
5BKA
DownloadVisualize
BU of 5bka by Molmil
2.1 Angstrom structure of ActVI-ORFA from Streptomyces Coelicolor
Descriptor: Hydroxylacyl-CoA dehydrogenase
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-06-02
Release date:2020-06-03
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Acta Crystallogr.,Sect.F, 76, 2020
1IEH
DownloadVisualize
BU of 1ieh by Molmil
SOLUTION STRUCTURE OF A SOLUBLE SINGLE-DOMAIN ANTIBODY WITH HYDROPHOBIC RESIDUES TYPICAL OF A VL/VH INTERFACE
Descriptor: BRUC.D4.4
Authors:Vranken, W, Tolkatchev, D, Xu, P, Tanha, J, Chen, Z, Narang, S, Ni, F.
Deposit date:2001-04-09
Release date:2002-08-07
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a llama single-domain antibody with hydrophobic residues typical of the VH/VL interface.
Biochemistry, 41, 2002
2KNY
DownloadVisualize
BU of 2kny by Molmil
Fusion construct of CR17 from LRP-1 and ApoE residues 130-149
Descriptor: CALCIUM ION, LRP-1, linker, ...
Authors:Guttman, M, Komives, E.A.
Deposit date:2009-09-08
Release date:2010-04-14
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Structure of the minimal interface between ApoE and LRP.
J.Mol.Biol., 398, 2010
4JME
DownloadVisualize
BU of 4jme by Molmil
Enduracididine biosynthesis enzyme MppR complexed with 2-keto-enduracididine
Descriptor: (4R)-4-(2-carboxyethyl)imidazolidin-2-iminium, Putative uncharacterized protein mppR
Authors:Silvaggi, N.R.
Deposit date:2013-03-13
Release date:2013-07-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characterization of MppR, an Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus: Functional Diversity in the Acetoacetate Decarboxylase-like Superfamily.
Biochemistry, 52, 2013
4JM3
DownloadVisualize
BU of 4jm3 by Molmil
Enduracididine Biosynthesis Enzyme MppR with HEPES Buffer Bound
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Putative uncharacterized protein mppR
Authors:Silvaggi, N.R.
Deposit date:2013-03-13
Release date:2013-07-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Functional Characterization of MppR, an Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus: Functional Diversity in the Acetoacetate Decarboxylase-like Superfamily.
Biochemistry, 52, 2013
1BOB
DownloadVisualize
BU of 1bob by Molmil
HISTONE ACETYLTRANSFERASE HAT1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH ACETYL COENZYME A
Descriptor: ACETYL COENZYME *A, CALCIUM ION, HISTONE ACETYLTRANSFERASE
Authors:Dutnall, R.N, Tafrov, S.T, Sternglanz, R, Ramakrishnan, V.
Deposit date:1998-07-02
Release date:1999-04-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the histone acetyltransferase Hat1: a paradigm for the GCN5-related N-acetyltransferase superfamily.
Cell(Cambridge,Mass.), 94, 1998
3U93
DownloadVisualize
BU of 3u93 by Molmil
Crystal structure of the GluK3 ligand binding domain complex with glutamate and zinc: P2221 form
Descriptor: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-10-17
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Zinc Potentiates GluK3 Glutamate Receptor Function by Stabilizing the Ligand Binding Domain Dimer Interface.
Neuron, 76, 2012
1C9W
DownloadVisualize
BU of 1c9w by Molmil
CHO REDUCTASE WITH NADP+
Descriptor: CHO REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Ye, Q, Li, X, Hyndman, D, Flynn, T.G, Jia, Z.
Deposit date:1999-08-03
Release date:2000-01-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of CHO reductase, a member of the aldo-keto reductase superfamily.
Proteins, 38, 2000
2XV5
DownloadVisualize
BU of 2xv5 by Molmil
Human lamin A coil 2B fragment
Descriptor: LAMIN-A/C
Authors:Kapinos, L.E, Burkhard, P, Aebi, U, Herrmann, H, Strelkov, S.V.
Deposit date:2010-10-22
Release date:2011-03-09
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Simultaneous Formation of Right- and Left-Handed Anti-Parallel Coiled-Coil Interfaces by a Coil2 Fragment of Human Lamin A.
J.Mol.Biol., 408, 2011
4IPY
DownloadVisualize
BU of 4ipy by Molmil
HIV capsid C-terminal domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein p24
Authors:Lampel, A, Yaniv, O, Berger, O, Bachrach, E, Gazit, E, Frolow, F.
Deposit date:2013-01-10
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A triclinic crystal structure of the carboxy-terminal domain of HIV-1 capsid protein with four molecules in the asymmetric unit reveals a novel packing interface.
Acta Crystallogr.,Sect.F, 69, 2013
4JMD
DownloadVisualize
BU of 4jmd by Molmil
Enduracididine biosynthesis enzyme MppR complexed with the condensation product of pyruvate and imidazole 4-carboxaldehyde
Descriptor: (3E)-4-(1H-imidazol-4-yl)but-3-enoic acid, Putative uncharacterized protein mppR
Authors:Silvaggi, N.R.
Deposit date:2013-03-13
Release date:2013-07-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural and Functional Characterization of MppR, an Enduracididine Biosynthetic Enzyme from Streptomyces hygroscopicus: Functional Diversity in the Acetoacetate Decarboxylase-like Superfamily.
Biochemistry, 52, 2013
5M3V
DownloadVisualize
BU of 5m3v by Molmil
BEAT Fc
Descriptor: Ig gamma-1 chain C region, Ig gamma-1 chain C region,Ig gamma-3 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Skegro, D, Stutz, C, Bourquin, F, Blein, S.
Deposit date:2016-10-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Immunoglobulin domain interface exchange as a platform technology for the generation of Fc heterodimers and bispecific antibodies.
J. Biol. Chem., 292, 2017
1SCQ
DownloadVisualize
BU of 1scq by Molmil
K236L mutant of hydroxynitrile lyase from Hevea brasiliensis in complex with acetonecyanohydrin
Descriptor: (S)-acetone-cyanohydrin lyase, 2-HYDROXY-2-METHYLPROPANENITRILE, SULFATE ION
Authors:Gruber, K, Gartler, G, Krammer, B, Schwab, H, Kratky, C.
Deposit date:2004-02-12
Release date:2004-06-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Reaction mechanism of hydroxynitrile lyases of the alpha/beta-hydrolase superfamily: the three-dimensional structure of the transient enzyme-substrate complex certifies the crucial role of LYS236
J.Biol.Chem., 279, 2004
5OFT
DownloadVisualize
BU of 5oft by Molmil
Structural basis for OXA-48 dimerization
Descriptor: Beta-lactamase
Authors:Lund, B.A, Nesheim, B.H.B, Leiros, H.K.S.
Deposit date:2017-07-11
Release date:2018-08-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The biological assembly of OXA-48 reveals a dimer interface with high charge complementarity and very high affinity.
FEBS J., 285, 2018
4K0E
DownloadVisualize
BU of 4k0e by Molmil
X-ray crystal structure of a heavy metal efflux pump, crystal form II
Descriptor: Heavy metal cation tricomponent efflux pump ZneA(CzcA-like), ZINC ION
Authors:Pak, J.E, Ngonlong Ekende, E, Vandenbussche, G, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2013-04-03
Release date:2013-10-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.713 Å)
Cite:Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4K0J
DownloadVisualize
BU of 4k0j by Molmil
X-ray crystal structure of a heavy metal efflux pump, crystal form I
Descriptor: Heavy metal cation tricomponent efflux pump ZneA(CzcA-like), ZINC ION
Authors:Pak, J.E, Stroud, R.M, Ngonlong Ekende, E, Vandenbussche, G, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2013-04-04
Release date:2013-10-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
2VNR
DownloadVisualize
BU of 2vnr by Molmil
Family 51 carbohydrate binding module from a family 98 glycoside hydrolase produced by Clostridium perfringens.
Descriptor: CALCIUM ION, CPE0329
Authors:Gregg, K.J, Finn, R, Abbott, D.W, Boraston, A.B.
Deposit date:2008-02-06
Release date:2008-02-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Divergent Modes of Glycan Recognition by a New Family of Carbohydrate-Binding Modules
J.Biol.Chem., 283, 2008
5OCW
DownloadVisualize
BU of 5ocw by Molmil
Structure of Mycobacterium tuberculosis tryptophan synthase in space group F222
Descriptor: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, Tryptophan synthase alpha chain, Tryptophan synthase beta chain
Authors:Futterer, K, Abrahams, K, Cox, J.A.G, Besra, G.S.
Deposit date:2017-07-03
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (4 Å)
Cite:Inhibiting mycobacterial tryptophan synthase by targeting the inter-subunit interface.
Sci Rep, 7, 2017
1FOA
DownloadVisualize
BU of 1foa by Molmil
CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I
Descriptor: ALPHA-1,3-MANNOSYL-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Unligil, U.M, Zhou, S, Yuwaraj, S, Sarkar, M, Schachter, H, Rini, J.M.
Deposit date:2000-08-26
Release date:2001-05-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structure of rabbit N-acetylglucosaminyltransferase I: catalytic mechanism and a new protein superfamily.
EMBO J., 19, 2000

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon