Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1T2H
DownloadVisualize
BU of 1t2h by Molmil
Y81W mutant of RNase Sa from Streptomyces aureofaciens
Descriptor: Guanyl-specific ribonuclease Sa, SULFATE ION
Authors:Sevcik, J, Urbanikova, L.
Deposit date:2004-04-21
Release date:2004-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1 Å)
Cite:Contribution of single tryptophan residues to the fluorescence and stability of ribonuclease sa.
Biophys.J., 87, 2004
5VDP
DownloadVisualize
BU of 5vdp by Molmil
Human cyclic GMP-AMP synthase (cGAS) in complex with 2',3'-cGAMP
Descriptor: Cyclic GMP-AMP synthase, SULFATE ION, ZINC ION, ...
Authors:Byrnes, L.J, Hall, J.D.
Deposit date:2017-04-03
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition.
Protein Sci., 26, 2017
5KY5
DownloadVisualize
BU of 5ky5 by Molmil
mouse POFUT1 in complex with EGF(+) and GDP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, EGF(+), GDP-fucose protein O-fucosyltransferase 1, ...
Authors:Li, Z, Rini, J.M.
Deposit date:2016-07-21
Release date:2017-05-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1.
Nat. Chem. Biol., 13, 2017
3HMH
DownloadVisualize
BU of 3hmh by Molmil
Crystal structure of the second bromodomain of human TBP-associated factor RNA polymerase 1-like (TAF1L)
Descriptor: Transcription initiation factor TFIID 210 kDa subunit
Authors:Filippakopoulos, P, Picaud, S, Keates, T, Zhang, Y, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-05-29
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
5L01
DownloadVisualize
BU of 5l01 by Molmil
Tryptophan 5-hydroxylase in complex with inhibitor (3~{S})-8-[2-azanyl-6-[(1~{R})-1-(4-chloranyl-2-phenyl-phenyl)-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]-2,8-diazaspiro[4.5]decane-3-carboxylic acid
Descriptor: (3~{S})-8-[2-azanyl-6-[(1~{R})-1-(4-chloranyl-2-phenyl-phenyl)-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]-2,8-diazaspiro[4.5]decane-3-carboxylic acid, FE (III) ION, Tryptophan 5-hydroxylase 1
Authors:Stein, A.J, Goldberg, D.R, De Lombaert, S, Holt, M.C.
Deposit date:2016-07-26
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Optimization of spirocyclic proline tryptophan hydroxylase-1 inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
4XP3
DownloadVisualize
BU of 4xp3 by Molmil
Crystal structure of ERK2 in complex with an inhibitor
Descriptor: 2-amino-1,9-dihydro-6H-purine-6-thione, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, ...
Authors:Gelin, M, Allemand, F, Labesse, G, Guichou, J.F.
Deposit date:2015-01-16
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
1BNI
DownloadVisualize
BU of 1bni by Molmil
BARNASE WILDTYPE STRUCTURE AT PH 6.0
Descriptor: BARNASE
Authors:Cameron, A, Henrick, K, Fersht, A.R, Dodson, G, Buckle, A.M.
Deposit date:1995-05-17
Release date:1995-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structural analysis of mutations in the hydrophobic cores of barnase.
J.Mol.Biol., 234, 1993
5VEU
DownloadVisualize
BU of 5veu by Molmil
Human Cytochrome P450 3A5 (CYP3A5)
Descriptor: Cytochrome P450 3A5, PROTOPORPHYRIN IX CONTAINING FE, RITONAVIR
Authors:Hsu, M.-H, Johnson, E.F.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:The X-Ray Crystal Structure of the Human Mono-Oxygenase Cytochrome P450 3A5-Ritonavir Complex Reveals Active Site Differences between P450s 3A4 and 3A5.
Mol. Pharmacol., 93, 2018
5LB3
DownloadVisualize
BU of 5lb3 by Molmil
Crystal structure of human RECQL5 helicase in complex with ADP/Mg.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase Q5, MAGNESIUM ION, ...
Authors:Newman, J.A, Aitkenhead, H, Savitsky, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gileadi, O, Structural Genomics Consortium (SGC)
Deposit date:2016-06-15
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into the RecQ helicase mechanism revealed by the structure of the helicase domain of human RECQL5.
Nucleic Acids Res., 45, 2017
4XDC
DownloadVisualize
BU of 4xdc by Molmil
Active semisynthetic [FeFe]-hydrogenase CpI with aza-dithiolato-bridged [2Fe] cofactor
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Esselborn, J, Hofmann, E, Kurisu, G, Happe, T.
Deposit date:2014-12-19
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:A structural view of synthetic cofactor integration into [FeFe]-hydrogenases.
Chem Sci, 7, 2016
5VDO
DownloadVisualize
BU of 5vdo by Molmil
Human cyclic GMP-AMP synthase (cGAS) in complex with 2',2'-cGAMP
Descriptor: 2-amino-9-[(1R,3R,6R,8R,9R,11S,14R,16R,17R,18R)-16-(6-amino-9H-purin-9-yl)-3,11,17,18-tetrahydroxy-3,11-dioxido-2,4,7,10,12,15-hexaoxa-3,11-diphosphatricyclo[12.2.1.1~6,9~]octadec-8-yl]-1,9-dihydro-6H-purin-6-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Byrnes, L.J, Hall, J.D.
Deposit date:2017-04-03
Release date:2017-09-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.218 Å)
Cite:The catalytic mechanism of cyclic GMP-AMP synthase (cGAS) and implications for innate immunity and inhibition.
Protein Sci., 26, 2017
4ZPP
DownloadVisualize
BU of 4zpp by Molmil
Crystal Structure of Protocadherin Gamma C5 EC1-3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MCG133388, ...
Authors:Wolcott, H.N, Goodman, K.M, Bahna, F, Mannepalli, S, Shapiro, L.
Deposit date:2015-05-08
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Molecular Logic of Neuronal Self-Recognition through Protocadherin Domain Interactions.
Cell, 163, 2015
1BOD
DownloadVisualize
BU of 1bod by Molmil
THE SOLUTION STRUCTURES OF MUTANT CALBINDIN D9K'S, AS DETERMINED BY NMR, SHOW THAT THE CALCIUM BINDING SITE CAN ADOPT DIFFERENT FOLDS
Descriptor: CALBINDIN D9K
Authors:Johansson, C, Ullner, M, Drakenberg, T.
Deposit date:1993-04-23
Release date:1993-10-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:The solution structures of mutant calbindin D9k's, as determined by NMR, show that the calcium-binding site can adopt different folds.
Biochemistry, 32, 1993
1CEI
DownloadVisualize
BU of 1cei by Molmil
STRUCTURE DETERMINATION OF THE COLICIN E7 IMMUNITY PROTEIN (IMME7) THAT BINDS SPECIFICALLY TO THE DNASE-TYPE COLICIN E7 AND INHIBITS ITS BACTERIOCIDAL ACTIVITY
Descriptor: COLICIN E7 IMMUNITY PROTEIN
Authors:Chak, K.-F, Safo, M.K, Ku, W.-Y, Hsieh, S.-Y, Yuan, H.S.
Deposit date:1996-03-19
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the immunity protein of colicin E7 suggests a possible colicin-interacting surface.
Proc.Natl.Acad.Sci.USA, 93, 1996
5KU1
DownloadVisualize
BU of 5ku1 by Molmil
hMiro1 EF hand and cGTPase domains in the GDP-bound state
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Klosowiak, J.L, Focia, P.J, Rice, S.E, Freymann, D.M.
Deposit date:2016-07-12
Release date:2016-09-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural insights into Parkin substrate lysine targeting from minimal Miro substrates.
Sci Rep, 6, 2016
5KY3
DownloadVisualize
BU of 5ky3 by Molmil
mouse POFUT1 in complex with mouse Factor VII EGF1 mutant (T101A) and GDP-fucose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Coagulation factor VII, GDP-fucose protein O-fucosyltransferase 1, ...
Authors:Li, Z, Rini, J.M.
Deposit date:2016-07-21
Release date:2017-05-17
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Recognition of EGF-like domains by the Notch-modifying O-fucosyltransferase POFUT1.
Nat. Chem. Biol., 13, 2017
3I3N
DownloadVisualize
BU of 3i3n by Molmil
Crystal structure of the BTB-BACK domains of human KLHL11
Descriptor: CHLORIDE ION, Kelch-like protein 11, THIOCYANATE ION
Authors:Murray, J.W, Cooper, C.D.O, Krojer, T, Mahajan, P, Salah, E, Keates, T, Savitsky, P, Pike, A.C.W, Roos, A, Muniz, J, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Knapp, S, Bullock, A, Structural Genomics Consortium (SGC)
Deposit date:2009-06-30
Release date:2009-08-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the BTB-BACK domains of human KLHL11
To be Published
4Z4M
DownloadVisualize
BU of 4z4m by Molmil
Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein
Descriptor: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
Authors:Rohaim, A, Kawasaki, M, Wakatsuki, S.
Deposit date:2015-04-02
Release date:2016-04-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
4Z7V
DownloadVisualize
BU of 4z7v by Molmil
L3-12 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class II HLA-DQ-alpha chain, MHC class II HLA-DQ-beta-1, ...
Authors:Petersen, J, Rossjohn, J, Reid, H.H, Koning, F.
Deposit date:2015-04-08
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Determinants of Gliadin-Specific T Cell Selection in Celiac Disease.
J Immunol., 194, 2015
5KYW
DownloadVisualize
BU of 5kyw by Molmil
crystal structure of Sec23 and TANGO1 peptide3 complex
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24D, TANGO1 peptide3, ...
Authors:Ma, W, Goldberg, J.
Deposit date:2016-07-22
Release date:2016-09-07
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:TANGO1/cTAGE5 receptor as a polyvalent template for assembly of large COPII coats.
Proc.Natl.Acad.Sci.USA, 113, 2016
1DEV
DownloadVisualize
BU of 1dev by Molmil
CRYSTAL STRUCTURE OF SMAD2 MH2 DOMAIN BOUND TO THE SMAD-BINDING DOMAIN OF SARA
Descriptor: MAD (mothers against decapentaplegic, Drosophila) homolog 2, Smad anchor for receptor activation
Authors:Shi, Y, Wu, G.
Deposit date:1999-11-15
Release date:2000-01-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of Smad2 recognition by the Smad anchor for receptor activation.
Science, 287, 2000
4YYZ
DownloadVisualize
BU of 4yyz by Molmil
11B-HYDROXYSTEROID DEHYDROGENASE TYPE I IN COMPLEX WITH INHIBITOR
Descriptor: Corticosteroid 11-beta-dehydrogenase isozyme 1, N-[(1R,2s,3S,5s,7s)-5-hydroxytricyclo[3.3.1.1~3,7~]dec-2-yl]-5,7-dimethylpyrazolo[1,5-a]pyrimidine-3-carboxamide, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Branden, G, Boden, C, Ogg, D.
Deposit date:2015-03-24
Release date:2016-02-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design of pyrozolo-pyrimidines as 11beta-HSD1 inhibitors through optimisation of molecular electrostatic potential.
Medchemcomm, 6, 2016
3LH9
DownloadVisualize
BU of 3lh9 by Molmil
Crystal structure of mouse VPS26B(L197S/R199E) in spacegroup P41 21 2
Descriptor: Vacuolar protein sorting-associated protein 26B
Authors:Collins, B, Shaw, D, Norwood, S.
Deposit date:2010-01-21
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Assembly and solution structure of the core retromer protein complex.
Traffic, 12, 2011
3LK9
DownloadVisualize
BU of 3lk9 by Molmil
DNA polymerase beta with a gapped DNA substrate and dTMP(CF2)P(CF2)P
Descriptor: 5'-O-[(R)-{[(R)-[difluoro(phosphono)methyl](hydroxy)phosphoryl](difluoro)methyl}(hydroxy)phosphoryl]thymidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Zibinsky, M, Surya Prakash, G.K, Upton, T.G, Kashemirov, B.A, McKenna, C.E, Oertell, K, Goodman, M.F, Batra, V.K, Pedersen, L.C, Beard, W.A, Wilson, S.H.
Deposit date:2010-01-27
Release date:2011-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Synthesis and biological evaluation of fluorinated deoxynucleotide analogs based on bis-(difluoromethylene)triphosphoric acid.
Proc.Natl.Acad.Sci.USA, 107, 2010
4ZG9
DownloadVisualize
BU of 4zg9 by Molmil
Structural basis for inhibition of human autotaxin by four novel compounds
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(11aS)-6-(4-fluorobenzyl)-1,3-dioxo-5,6,11,11a-tetrahydro-1H-imidazo[1',5':1,6]pyrido[3,4-b]indol-2(3H)-yl]propanoic acid, ...
Authors:Stein, A.J, Bain, G, Hutchinson, J.H, Evans, J.F.
Deposit date:2015-04-22
Release date:2015-10-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Basis for Inhibition of Human Autotaxin by Four Potent Compounds with Distinct Modes of Binding.
Mol.Pharmacol., 88, 2015

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon