PDB: 1414 resultsInfo pagesStatus searchChemie searchBIRD

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3FN3	Dimeric Structure of PD-L1 Descriptor: Programmed cell death 1 ligand 1 Authors: Chen, Y, Gao, F, Liu, P, Chu, F, Qi, J, Gao, G.F. Deposit date: 2008-12-23 Release date: 2009-12-29 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A dimeric structure of PD-L1: functional units or evolutionary relics? Protein Cell, 1, 2010
3EYQ	Crystal structure of MJ5 Fab, a germline antibody variant of anti-human cytomegalovirus antibody 8f9 Descriptor: 8f9 Fab, M2J5 Fab Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-21 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
3EYS	PFA1 Fab fragment complexed with pyro-Glu3-A-Beta (3-8) Descriptor: GLYCEROL, If kappa light chain, PFA1 Fab Heavy Chain, ... Authors: Gardberg, A.S, Dealwis, C.G. Deposit date: 2008-10-21 Release date: 2009-05-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structures of Abeta-related peptide--monoclonal antibody complexes. Biochemistry, 48, 2009
3EYO	Crystal structure of anti-human cytomegalovirus antibody 8F9 Descriptor: 8f9 Fab, AD-2 Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-21 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
3EYU	PFA1 Fab fragment complexed with Ror2(518-525) Descriptor: If kappa light chain, PFA1 Fab Heavy Chain, ROR2(518-525) peptide Authors: Gardberg, A.S, Dealwis, C.G. Deposit date: 2008-10-21 Release date: 2009-05-12 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Structures of Abeta-related peptide--monoclonal antibody complexes. Biochemistry, 48, 2009
3EYF	Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide Descriptor: 8f9 Fab, AD-2, GLYCEROL, ... Authors: Thomson, C.A, Bryson, S, McLean, G.R, Creagh, A.L, Pai, E.F, Schrader, J.W. Deposit date: 2008-10-20 Release date: 2008-12-16 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus. Embo J., 27, 2008
3EPD	CryoEM structure of poliovirus receptor bound to poliovirus type 3 Descriptor: MYRISTIC ACID, Poliovirus Type3 peptide, Poliovirus receptor, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (9 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EPF	CryoEM structure of poliovirus receptor bound to poliovirus type 2 Descriptor: 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE, MYRISTIC ACID, Poliovirus receptor, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (9 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EPC	CryoEM structure of poliovirus receptor bound to poliovirus type 1 Descriptor: MYRISTIC ACID, Poliovirus receptor, Protein VP1, ... Authors: Zhang, P, Mueller, S, Morais, M.C, Bator, C.M, Bowman, V.D, Hafenstein, S, Wimmer, E, Rossmann, M.G. Deposit date: 2008-09-29 Release date: 2008-11-11 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (8 Å) Cite: Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA, 105, 2008
3EOY	Structure of Reovirus sigma1 in Complex with Its Receptor Junctional Adhesion Molecule-A Descriptor: Junctional adhesion molecule A, Outer capsid protein sigma-1 Authors: Kirchner, E, Guglielmi, K.M, Dermody, T.S, Stehle, T. Deposit date: 2008-09-29 Release date: 2008-11-04 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Structure of reovirus sigma1 in complex with its receptor junctional adhesion molecule-A Plos Pathog., 4, 2008
3EHB	A D-Pathway Mutation Decouples the Paracoccus Denitrificans Cytochrome c Oxidase by Altering the side chain orientation of a distant, conserved Glutamate Descriptor: CALCIUM ION, COPPER (II) ION, Cytochrome c oxidase subunit 1-beta, ... Authors: Koepke, J, Mueller, H, Peng, G. Deposit date: 2008-09-12 Release date: 2008-09-30 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.32 Å) Cite: A d-pathway mutation decouples the paracoccusdenitrificans cytochrome C oxidase by altering the side-chain orientation of a distant conserved glutamate J.Mol.Biol., 384, 2008
2W0L	CRYSTAL STRUCTURE OF THE MUTANT H8P FROM THE RECOMBINANT VARIABLE DOMAIN 6JAL2 Descriptor: V1-22 protein Authors: Rudino-Pinera, E, Gonzalezrubio-Garrido, P, Horjales, E. Deposit date: 2008-08-19 Release date: 2009-11-17 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structure of the Variable Domain 6Ajl2 To be Published
2W0K	Crystal structure of the recombinant variable domain 6JAL2 Descriptor: V1-22 PROTEIN Authors: Rudino-Pinera, E, Gonzalezrubio-Garrido, P, Horjales, E. Deposit date: 2008-08-19 Release date: 2009-11-17 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.35 Å) Cite: A Single Mutation at the Sheet Switch Region Results in Conformational Changes Favoring Lambda6 Light-Chain Fibrillogenesis. J.Mol.Biol., 396, 2010
3E3Q	Structure of the 3alpham13 high-affinity mutant of the 2C TCR in complex with Ld/QL9 Descriptor: H-2 class I histocompatibility antigen, L-D alpha chain, QL9 peptide, ... Authors: Colf, L.A, Garcia, K.C. Deposit date: 2008-08-07 Release date: 2008-11-04 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Distinct CDR3 conformations in TCRs determine the level of cross-reactivity for diverse antigens, but not the docking orientation. J.Immunol., 181, 2008
3E2H	Structure of the m67 high-affinity mutant of the 2C TCR in complex with Ld/QL9 Descriptor: H-2 class I histocompatibility antigen, L-D alpha chain, M67 TCR beta chain, ... Authors: Colf, L.A, Garcia, K.C. Deposit date: 2008-08-05 Release date: 2008-11-04 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Distinct CDR3 Conformations in TCRs Determine the Level of Cross-Reactivity for Diverse Antigens, but Not the Docking Orientation J.Immunol., 181, 2008
3DVG	Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin Descriptor: Human IgG1 fab fragment heavy chain, Human IgG1 fab fragment light chain, Ubiquitin, ... Authors: Hymowitz, S.G. Deposit date: 2008-07-18 Release date: 2008-09-30 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. Cell(Cambridge,Mass.), 134, 2008
3DV4	Crystal structure of SAG506-01, tetragonal, crystal 1 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-18 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DVN	Crystal structure of K63-specific fab Apu2.16 bound to K63-linked di-ubiquitin Descriptor: Human IgG1 fab fragment heavy chain, Human IgG1 fab fragment light chain, Ubiquitin, ... Authors: Hymowitz, S.G. Deposit date: 2008-07-18 Release date: 2008-09-30 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Ubiquitin chain editing revealed by polyubiquitin linkage-specific antibodies. Cell(Cambridge,Mass.), 134, 2008
3DV6	Crystal structure of SAG506-01, tetragonal, crystal 2 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-18 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DUS	Crystal structure of SAG506-01, orthorhombic, twinned, crystal 1 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-17 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DUR	Crystal structure of SAG173-04 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-17 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DUU	Crystal structure of SAG506-01, orthorhombic, twinned, crystal 2 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-17 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DMM	Crystal structure of the CD8 alpha beta/H-2Dd complex Descriptor: Beta-2 microglobulin, H-2 class I histocompatibility antigen, D-D alpha chain, ... Authors: Wang, R, Natarajan, K, Margulies, D.H. Deposit date: 2008-07-01 Release date: 2009-07-14 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis of the CD8alphabeta/MHC class i interaction: focused recognition orients CD8beta to a T cell proximal position. J.Immunol., 183, 2009
2ZNX	5-Fluorotryptophan Incorporated ScFv10 Complexed to Hen Egg Lysozyme Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Lysozyme C, ScFv Authors: DeSantis, M.E, Acchione, M, Li, M, Walter, R.L, Wlodawer, A, Smith-Gill, S. Deposit date: 2008-05-02 Release date: 2009-01-27 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Specific fluorine labeling of the HyHEL10 antibody affects antigen binding and dynamics Biochemistry, 51, 2012
2ZNW	Crystal Structure of ScFv10 in Complex with Hen Egg Lysozyme Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Lysozyme C, ScFv10 Authors: DeSantis, M.E, Acchione, M, Li, M, Walter, R.L, Wlodawer, A, Smith-Gill, S. Deposit date: 2008-05-02 Release date: 2009-01-27 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Specific fluorine labeling of the HyHEL10 antibody affects antigen binding and dynamics Biochemistry, 51, 2012

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