Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6OOG
DownloadVisualize
BU of 6oog by Molmil
Crystal structure of triosephosphate isomerase from Taenia Solium in complex with 2PG
Descriptor: 2-PHOSPHOGLYCOLIC ACID, SODIUM ION, Triosephosphate isomerase
Authors:Jimenez-Sandoval, P, Brieba, L.
Deposit date:2019-04-23
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structures of Triosephosphate Isomerases from Taenia solium and Schistosoma mansoni provide insights for vaccine rationale and drug design against helminth parasites.
Plos Negl Trop Dis, 14, 2020
6LPJ
DownloadVisualize
BU of 6lpj by Molmil
A2AR crystallized in EROCOC17+4, LCP-SFX at 277 K
Descriptor: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
Deposit date:2020-01-10
Release date:2020-11-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
4X5V
DownloadVisualize
BU of 4x5v by Molmil
Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating A and incorporated 8-oxo-dGMP
Descriptor: CITRIC ACID, DNA (5'-D(*CP*AP*GP*TP*AP*CP*(8OG))-3'), DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3'), ...
Authors:Burak, M.J, Guja, K.E, Garcia-Diaz, M.
Deposit date:2014-12-05
Release date:2015-10-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Nucleotide binding interactions modulate dNTP selectivity and facilitate 8-oxo-dGTP incorporation by DNA polymerase lambda.
Nucleic Acids Res., 43, 2015
3QL0
DownloadVisualize
BU of 3ql0 by Molmil
Crystal structure of N23PP/S148A mutant of E. coli dihydrofolate reductase
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
Deposit date:2011-02-02
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis.
Science, 332, 2011
4WXS
DownloadVisualize
BU of 4wxs by Molmil
Crystal Structure of the E396D SNP Variant of the Myocilin Olfactomedin Domain
Descriptor: CALCIUM ION, GLYCEROL, HEXAETHYLENE GLYCOL, ...
Authors:Donegan, R.K, Freeman, D.M, Lieberman, R.L.
Deposit date:2014-11-14
Release date:2015-04-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for misfolding in myocilin-associated glaucoma.
Hum.Mol.Genet., 24, 2015
6OVL
DownloadVisualize
BU of 6ovl by Molmil
2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-08
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
6OP8
DownloadVisualize
BU of 6op8 by Molmil
S. pombe Ubc7/U7BR complex
Descriptor: 1,2-ETHANEDIOL, CUE domain-containing protein 4, mitochondrial, ...
Authors:Hann, Z.S, Lima, C.D.
Deposit date:2019-04-24
Release date:2019-08-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Crystal structure of the Schizosaccharomyces pombe U7BR E2-binding region in complex with Ubc7.
Acta Crystallogr.,Sect.F, 75, 2019
4X0S
DownloadVisualize
BU of 4x0s by Molmil
Hexamer formed by a macrocycle containing a sequence from beta-2-microglobulin (63-69).
Descriptor: CHLORIDE ION, ORN-TYR-LEU-LEU-PHI-TYR-VAL-GLU-ORN-LYS-VAL-ALA-MAA-ALA-VAL-LYS, SODIUM ION, ...
Authors:Spencer, R.K, Salveson, P.J, Nowick, J.S.
Deposit date:2014-11-23
Release date:2015-05-06
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.032 Å)
Cite:X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin.
J.Am.Chem.Soc., 137, 2015
6OUW
DownloadVisualize
BU of 6ouw by Molmil
1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with enamine intermediate bound
Descriptor: 1-deoxy-D-xylulose-5-phosphate synthase, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Chen, P.Y.-T, Drennan, C.L.
Deposit date:2019-05-05
Release date:2019-07-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:X-ray crystallography-based structural elucidation of enzyme-bound intermediates along the 1-deoxy-d-xylulose 5-phosphate synthase reaction coordinate.
J.Biol.Chem., 294, 2019
4WXP
DownloadVisualize
BU of 4wxp by Molmil
X-ray crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor at 2.08 A resolution
Descriptor: (1-methyl-1H-indol-3-yl)acetic acid, CHLORIDE ION, NS3-4 protease, ...
Authors:Davies, D.R.
Deposit date:2014-11-14
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor
TO BE PUBLISHED
4WXQ
DownloadVisualize
BU of 4wxq by Molmil
Crystal Structure of the Myocilin Olfactomedin Domain
Descriptor: CALCIUM ION, HEXAETHYLENE GLYCOL, Myocilin, ...
Authors:Orwig, S.D, Turnage, K.C, Donegan, R.K, Lieberman, R.L.
Deposit date:2014-11-14
Release date:2015-04-01
Last modified:2017-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for misfolding in myocilin-associated glaucoma.
Hum.Mol.Genet., 24, 2015
3QU3
DownloadVisualize
BU of 3qu3 by Molmil
Crystal structure of IRF-7 DBD apo form
Descriptor: 1,2-ETHANEDIOL, Interferon regulatory factor 7, SODIUM ION
Authors:De Ioannes, P.E, Escalante, C.R, Aggarwal, A.K.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of apo IRF-3 and IRF-7 DNA binding domains: effect of loop L1 on DNA binding.
Nucleic Acids Res., 39, 2011
4X30
DownloadVisualize
BU of 4x30 by Molmil
Crystal structure of human Thyroxine-binding globulin complexed with thyroine at 1.55 Angstrom resolution
Descriptor: 1,2-ETHANEDIOL, 3,5,3',5'-TETRAIODO-L-THYRONINE, FLUORIDE ION, ...
Authors:Qi, X.
Deposit date:2014-11-27
Release date:2015-12-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of human Thyroxine-binding globulin complexed with thyroine at 1.55 Angstrom resolution
To Be Published
4X8Q
DownloadVisualize
BU of 4x8q by Molmil
X-ray crystal structure of AlkD2 from Streptococcus mutans
Descriptor: CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Mullins, E.A, Shi, R, Eichman, B.F.
Deposit date:2014-12-10
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.729 Å)
Cite:A New Family of HEAT-Like Repeat Proteins Lacking a Critical Substrate Recognition Motif Present in Related DNA Glycosylases.
Plos One, 10, 2015
6LZK
DownloadVisualize
BU of 6lzk by Molmil
Aquifex aeolicus MutL ATPase domain with K252N mutation
Descriptor: DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, SODIUM ION
Authors:Fukui, K, Izuhara, K, Yano, T.
Deposit date:2020-02-19
Release date:2020-07-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.15949631 Å)
Cite:A Lynch syndrome-associated mutation at a Bergerat ATP-binding fold destabilizes the structure of the DNA mismatch repair endonuclease MutL.
J.Biol.Chem., 295, 2020
4XCQ
DownloadVisualize
BU of 4xcq by Molmil
Clostridium botulinum phage c-st TubZ (C-terminal tail truncated protein)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, SODIUM ION, TubZ
Authors:Oliva, M.A.
Deposit date:2014-12-18
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of phage c-st truncated TubZ at 2.4 Angstroms resolution
To Be Published
6P2T
DownloadVisualize
BU of 6p2t by Molmil
BshB from Bacillus subtilis complexed with citrate
Descriptor: CITRIC ACID, N-acetyl-alpha-D-glucosaminyl L-malate deacetylase 1, SODIUM ION, ...
Authors:Cook, P.D, Meloche, C.E.
Deposit date:2019-05-22
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:X-ray crystallographic structure of BshB, the zinc-dependent deacetylase involved in bacillithiol biosynthesis.
Protein Sci., 29, 2020
1SED
DownloadVisualize
BU of 1sed by Molmil
Crystal Structure of Protein of Unknown Function YhaL from Bacillus subtilis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Hypothetical protein yhaI, ...
Authors:Kim, Y, Joachimiak, A, Evdokimova, E, Savchenko, A, Edwards, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-02-17
Release date:2004-05-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Crystal Structure of the Hypothetical Protein YhaI, APC1180 from Bacillus subtilis
To be Published
4XJB
DownloadVisualize
BU of 4xjb by Molmil
X-ray structure of Lysozyme1
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Huang, C.Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M.
Deposit date:2015-01-08
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In meso in situ serial X-ray crystallography of soluble and membrane proteins.
Acta Crystallogr.,Sect.D, 71, 2015
4XJG
DownloadVisualize
BU of 4xjg by Molmil
X-ray structure of Lysozyme B2
Descriptor: BROMIDE ION, Lysozyme C, SODIUM ION
Authors:Huang, C.Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M.
Deposit date:2015-01-08
Release date:2015-06-03
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:In meso in situ serial X-ray crystallography of soluble and membrane proteins.
Acta Crystallogr.,Sect.D, 71, 2015
4XJI
DownloadVisualize
BU of 4xji by Molmil
X-ray structure of LysozymeS2
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Huang, C.Y, Olieric, V, Diederichs, K, Wang, M, Caffrey, M.
Deposit date:2015-01-08
Release date:2015-06-03
Last modified:2015-06-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:In meso in situ serial X-ray crystallography of soluble and membrane proteins.
Acta Crystallogr.,Sect.D, 71, 2015
6MBQ
DownloadVisualize
BU of 6mbq by Molmil
Crystal structure of Mg-free wild-type KRAS (2-166) bound to GMPPNP in the state 1 conformation
Descriptor: 1,2-ETHANEDIOL, GTPase KRas, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Dharmaiah, S, Davies, D.R, Abendroth, J, Gillette, W.G, Stephen, A.G, Simanshu, D.K.
Deposit date:2018-08-30
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of N-terminally processed KRAS provide insight into the role of N-acetylation.
Sci Rep, 9, 2019
6P1O
DownloadVisualize
BU of 6p1o by Molmil
Post-catalytic nicked complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and newly incorporated dAMP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Kaminski, A.M, Pedersen, L.C, Bebenek, K, Chiruvella, K.K, Ramsden, D.A, Kunkel, T.A.
Deposit date:2019-05-20
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine.
Nucleic Acids Res., 47, 2019
6P4D
DownloadVisualize
BU of 6p4d by Molmil
Hen egg lysozyme (HEL) containing three point mutations (HEL3x): R21Q, R73E, and D101R
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:Langley, D.B, Christ, D.
Deposit date:2019-05-27
Release date:2020-05-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Conformational diversity facilitates antibody mutation trajectories and discrimination between foreign and self-antigens.
Proc.Natl.Acad.Sci.USA, 117, 2020
3RW8
DownloadVisualize
BU of 3rw8 by Molmil
Crystal structure of lysozyme in 40% ethanol
Descriptor: ACETATE ION, CHLORIDE ION, ETHANOL, ...
Authors:Sharma, P, Solanki, A.K, Ashish
Deposit date:2011-05-08
Release date:2011-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.855 Å)
Cite:Crystal structure of lysozyme in 40% ethanol
to be published

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon