Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2MMG
DownloadVisualize
BU of 2mmg by Molmil
Structural Characterization of the Mengovirus Leader Protein Bound to Ran GTPase by Nuclear Magnetic Resonance
Descriptor: GTP-binding nuclear protein Ran
Authors:Bacot-Davis, V.R, Palmenberg, A.C, Cornilescu, C.C, Markley, J.L.
Deposit date:2014-03-15
Release date:2014-10-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of Mengovirus Leader protein, its phosphorylated derivatives, and in complex with nuclear transport regulatory protein, RanGTPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
2MH9
DownloadVisualize
BU of 2mh9 by Molmil
Resonance assignment of RQC domain of human Bloom syndrome protein
Descriptor: Bloom syndrome protein
Authors:Ko, J, Ryu, K.S, Choi, B.S.
Deposit date:2013-11-19
Release date:2014-10-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the RecQ C-terminal domain of human Bloom syndrome protein.
J.Biomol.Nmr, 58, 2014
2LXT
DownloadVisualize
BU of 2lxt by Molmil
Allosteric communication in the KIX domain proceeds through dynamic re-packing of the hydrophobic core
Descriptor: CREB-binding protein, Cyclic AMP-responsive element-binding protein 1, Histone-lysine N-methyltransferase MLL
Authors:Bruschweiler, S, Schanda, P, Konrat, R, Tollinger, M.
Deposit date:2012-08-31
Release date:2013-06-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Allosteric communication in the KIX domain proceeds through dynamic repacking of the hydrophobic core.
Acs Chem.Biol., 8, 2013
2MKN
DownloadVisualize
BU of 2mkn by Molmil
Structural Characterization of Interactions between the Double-Stranded RNA-Binding Zinc Finger Protein JAZ and dsRNA
Descriptor: RNA (5'-R(*GP*CP*CP*GP*UP*GP*GP*UP*CP*UP*GP*GP*UP*GP*GP*CP*CP*GP*G)-3'), RNA (5'-R(P*CP*CP*GP*GP*CP*CP*AP*CP*CP*AP*GP*AP*CP*CP*AP*CP*GP*GP*C)-3'), ZINC ION, ...
Authors:Wright, P, Dyson, J, Burge, R, Martinez-Yamout, M.
Deposit date:2014-02-10
Release date:2014-03-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Characterization of Interactions between the Double-Stranded RNA-Binding Zinc Finger Protein JAZ and Nucleic Acids.
Biochemistry, 53, 2014
2MKD
DownloadVisualize
BU of 2mkd by Molmil
Human JAZ ZF3 Residues 168-227
Descriptor: ZINC ION, Zinc finger protein 346
Authors:Wright, P, Dyson, J, Burge, R, Martinez-Yamout, M.
Deposit date:2014-02-05
Release date:2014-03-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Characterization of Interactions between the Double-Stranded RNA-Binding Zinc Finger Protein JAZ and Nucleic Acids.
Biochemistry, 53, 2014
2MMC
DownloadVisualize
BU of 2mmc by Molmil
Nucleotide-free human ran gtpase
Descriptor: GTP-binding nuclear protein Ran
Authors:Bacot-Davis, V.R, Palmenberg, A.C.
Deposit date:2014-03-13
Release date:2014-10-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Structure of Ran GTPase Determines C-terminal Tail Conformational Dynamics.
To be Published
2PX6
DownloadVisualize
BU of 2px6 by Molmil
Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat
Descriptor: (2S,3S,5S)-5-[(N-FORMYL-L-LEUCYL)OXY]-2-HEXYL-3-HYDROXYHEXADECANOIC ACID, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Thioesterase domain
Authors:Pemble IV, C.W, Johnson, L.C, Kridel, S.J, Lowther, W.T.
Deposit date:2007-05-14
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the thioesterase domain of human fatty acid synthase inhibited by Orlistat.
Nat.Struct.Mol.Biol., 14, 2007
2PJL
DownloadVisualize
BU of 2pjl by Molmil
Crystal Structure of Human Estrogen-Related Receptor alpha in Complex with a Synthetic Inverse Agonist reveals its Novel Molecular Mechanism
Descriptor: 1-CYCLOHEXYL-N-{[1-(4-METHYLPHENYL)-1H-INDOL-3-YL]METHYL}METHANAMINE, Steroid hormone receptor ERR1
Authors:Kallen, J.
Deposit date:2007-04-16
Release date:2007-06-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of human estrogen-related receptor alpha in complex with a synthetic inverse agonist reveals its novel molecular mechanism.
J.Biol.Chem., 282, 2007
2Q9Q
DownloadVisualize
BU of 2q9q by Molmil
The crystal structure of full length human GINS complex
Descriptor: DNA replication complex GINS protein PSF1, DNA replication complex GINS protein PSF2, GINS complex subunit 3, ...
Authors:Chang, Y.P, Wang, G, Chen, X.S.
Deposit date:2007-06-13
Release date:2007-08-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal structure of the GINS complex and functional insights into its role in DNA replication.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7VQT
DownloadVisualize
BU of 7vqt by Molmil
Crystal structure of LSD1 in complex with compound 5
Descriptor: 3-[3,5-bis(fluoranyl)-2-[(2-fluoranylpyridin-4-yl)methoxy]phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Niwa, H, Koda, Y, Sato, S, Yamamoto, H, Koyama, H, Umehara, T.
Deposit date:2021-10-20
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Design and Synthesis of Tranylcypromine-Derived LSD1 Inhibitors with Improved hERG and Microsomal Stability Profiles.
Acs Med.Chem.Lett., 13, 2022
7VQS
DownloadVisualize
BU of 7vqs by Molmil
Crystal structure of LSD1 in complex with compound 4
Descriptor: 3-[3,5-bis(fluoranyl)-2-[(2-fluoranylpyridin-3-yl)methoxy]phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Niwa, H, Koda, Y, Sato, S, Yamamoto, H, Koyama, H, Umehara, T.
Deposit date:2021-10-20
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Design and Synthesis of Tranylcypromine-Derived LSD1 Inhibitors with Improved hERG and Microsomal Stability Profiles.
Acs Med.Chem.Lett., 13, 2022
7VQU
DownloadVisualize
BU of 7vqu by Molmil
Crystal structure of LSD1 in complex with compound S1427
Descriptor: 3-[3,5-bis(fluoranyl)-2-[(2-fluoranylpyridin-3-yl)methoxy]phenyl]propanal, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Niwa, H, Koda, Y, Sato, S, Yamamoto, H, Koyama, H, Umehara, T.
Deposit date:2021-10-20
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Design and Synthesis of Tranylcypromine-Derived LSD1 Inhibitors with Improved hERG and Microsomal Stability Profiles.
Acs Med.Chem.Lett., 13, 2022
5C2K
DownloadVisualize
BU of 5c2k by Molmil
Crystal structure of the fusion protein linked by RhoA and the GAP domain of MgcRacGAP
Descriptor: ALUMINUM FLUORIDE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M.
Deposit date:2015-06-16
Release date:2016-06-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structural basis of G-protein target alternation of MgcRacGAP by phospholylation
To Be Published
5C19
DownloadVisualize
BU of 5c19 by Molmil
p97 variant 2 in the apo state
Descriptor: SULFATE ION, Transitional endoplasmic reticulum ATPase
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2015-06-13
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structural Basis of ATP Hydrolysis and Intersubunit Signaling in the AAA+ ATPase p97.
Structure, 24, 2016
6BRG
DownloadVisualize
BU of 6brg by Molmil
The SAM domain of mouse SAMHD1 is critical for its activation and regulation
Descriptor: Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, MAGNESIUM ION
Authors:Buzovetsky, O, Tang, C, Knecht, K.M, Antonucci, J.M, Wu, L, Ji, X, Xiong, Y.
Deposit date:2017-11-30
Release date:2018-02-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The SAM domain of mouse SAMHD1 is critical for its activation and regulation.
Nat Commun, 9, 2018
6BTA
DownloadVisualize
BU of 6bta by Molmil
CypA Mutant - S99T C115S
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Fraser, J.S, Kenner, L.R, Liu, L.
Deposit date:2017-12-06
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rescue of conformational dynamics in enzyme catalysis by directed evolution.
Nat Commun, 9, 2018
6BW3
DownloadVisualize
BU of 6bw3 by Molmil
Crystal structure of RBBP4 in complex with PRDM3 N-terminal peptide
Descriptor: Histone-binding protein RBBP4, MDS1 and EVI1 complex locus protein MDS1, UNKNOWN ATOM OR ION
Authors:Ivanochko, D, Halabelian, L, Hutchinson, A, Seitova, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2017-12-14
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Direct interaction between the PRDM3 and PRDM16 tumor suppressors and the NuRD chromatin remodeling complex.
Nucleic Acids Res., 47, 2019
7VIJ
DownloadVisualize
BU of 7vij by Molmil
Crystal structure of USP7-HUBL domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 7
Authors:Feng, N, Zeng, K.W.
Deposit date:2021-09-27
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Neuroinflammation inhibition by small-molecule targeting USP7 noncatalytic domain for neurodegenerative disease therapy.
Sci Adv, 8, 2022
6C90
DownloadVisualize
BU of 6c90 by Molmil
Human Mtr4 helicase in complex with ZCCHC8-CTD
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Exosome RNA helicase MTR4,Exosome RNA helicase MTR4, L(+)-TARTARIC ACID, ...
Authors:Puno, M.R, Lima, C.D.
Deposit date:2018-01-25
Release date:2018-05-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for MTR4-ZCCHC8 interactions that stimulate the MTR4 helicase in the nuclear exosome-targeting complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7V7C
DownloadVisualize
BU of 7v7c by Molmil
CryoEM structure of DDB1-VprBP-Vpr-UNG2(94-313) complex
Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1, Protein Vpr, ...
Authors:Wang, D, Xu, J, Liu, Q, Xiang, Y.
Deposit date:2021-08-21
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
6BW4
DownloadVisualize
BU of 6bw4 by Molmil
Crystal structure of RBBP4 in complex with PRDM16 N-terminal peptide
Descriptor: Histone-binding protein RBBP4, PR domain zinc finger protein 16, UNKNOWN ATOM OR ION
Authors:Ivanochko, D, Halabelian, L, Hutchinson, A, Seitova, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
Deposit date:2017-12-14
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Direct interaction between the PRDM3 and PRDM16 tumor suppressors and the NuRD chromatin remodeling complex.
Nucleic Acids Res., 47, 2019
5C1B
DownloadVisualize
BU of 5c1b by Molmil
p97-delta709-728 in complex with a UFD1-SHP peptide
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2015-06-13
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Characterization of an Additional Binding Surface on the p97 N-Terminal Domain Involved in Bipartite Cofactor Interactions.
Structure, 24, 2016
7V9B
DownloadVisualize
BU of 7v9b by Molmil
Crystal Structure of 14-3-3 epsilon with FOXO3a peptide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-[3,6-bis(dimethylamino)xanthen-9-yl]-5-methanoyl-benzoate, ARG-ARG-ARG-ALA-VAL-SEP-MET-ASP-ASN-SER-ASN, ...
Authors:Mathivanan, S, Kamariah, N.
Deposit date:2021-08-24
Release date:2022-08-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a 14-3-3 epsilon :FOXO3a pS253 Phosphopeptide Complex Reveals 14-3-3 Isoform-Specific Binding of Forkhead Box Class O Transcription Factor (FOXO) Phosphoproteins.
Acs Omega, 7, 2022
7V7B
DownloadVisualize
BU of 7v7b by Molmil
CryoEM structure of DDB1-VprBP complex in ARM-up conformation
Descriptor: DDB1- and CUL4-associated factor 1, DNA damage-binding protein 1
Authors:Wang, D, Xu, J, Liu, Q, Xiang, Y.
Deposit date:2021-08-21
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insights into the HIV-1 Vpr mediated ubiquitination through the Cullin-RING E3 ubiquitin ligase
To Be Published
6CJ2
DownloadVisualize
BU of 6cj2 by Molmil
Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor JWG056
Descriptor: 2-{[3-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino}-5-methyl-11-(propan-2-yl)-5,11-dihydro-6H-pyrimido[4,5-b][1,4]benzodiazepin-6-one, Bromodomain-containing protein 4
Authors:Xu, X, Blacklow, S.C.
Deposit date:2018-02-26
Release date:2019-03-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Structural and Atropisomeric Factors Governing the Selectivity of Pyrimido-benzodiazipinones as Inhibitors of Kinases and Bromodomains.
Acs Chem.Biol., 13, 2018

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon