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PDB: 51 results

4UJD
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mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like state
Descriptor: 18S Ribosomal RNA, 28S Ribosomal RNA, 40S RIBOSOMAL PROTEIN ES1, ...
Authors:Yamamoto, H, Unbehaun, A, Loerke, J, Behrmann, E, Marianne, C, Burger, J, Mielke, T, Spahn, C.M.T.
Deposit date:2014-06-18
Release date:2014-07-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (8.9 Å)
Cite:Structure of the Mammalian 80S Initiation Complex with Eif5B on Hcv Ires
Nat.Struct.Mol.Biol., 21, 2014
4UJC
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BU of 4ujc by Molmil
mammalian 80S HCV-IRES initiation complex with eIF5B POST-like state
Descriptor: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES1, ...
Authors:Yamamoto, H, Unbehaun, A, Loerke, J, Behrmann, E, Marianne, C, Burger, J, Mielke, T, Spahn, C.M.T.
Deposit date:2014-06-18
Release date:2014-07-30
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Structure of the Mammalian 80S Initiation Complex with Initiation Factor 5B on Hcv-Ires RNA.
Nat.Struct.Mol.Biol., 21, 2014
2GJU
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BU of 2gju by Molmil
Crystal structure of hypothetical protein PH1004 from Pyrococcus horikoshii OT3
Descriptor: 252aa long hypothetical protein, PHOSPHATE ION, SODIUM ION
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-03-31
Release date:2006-10-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of hypothetical protein PH1004 from Pyrococcus horikoshii OT3
To be published
2HR8
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BU of 2hr8 by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: PLATINUM (II) ION, S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Taketa, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-20
Release date:2007-01-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2HVB
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BU of 2hvb by Molmil
Crystal structure of hypothetical protein PH1083 from Pyrococcus horikoshii OT3
Descriptor: FE (III) ION, Superoxide reductase
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-28
Release date:2007-01-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of hypothetical protein PH1083 from Pyrococcus horikoshii OT3
To be Published
5FLX
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BU of 5flx by Molmil
Mammalian 40S HCV-IRES complex
Descriptor: 18S RRNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ...
Authors:Yamamoto, H, Collier, M, Loerke, J, Ismer, J, Schmidt, A, Hilal, T, Sprink, T, Yamamoto, K, Mielke, T, Burger, J, Shaikh, T.R, Dabrowski, M, Hildebrand, P.W, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-10-28
Release date:2015-12-23
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Embo J., 34, 2015
2HUN
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Crystal structure of hypothetical protein PH0414 from Pyrococcus horikoshii OT3
Descriptor: 336aa long hypothetical dTDP-glucose 4,6-dehydratase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-26
Release date:2007-01-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of hypothetical protein PH0414 from Pyrococcus horikoshii OT3
To be Published
2P6C
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Crystal structure of hypothetical protein aq_2013 from Aquifex aeolicus VF5.
Descriptor: PHOSPHATE ION, aq_2013 protein
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-17
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of hypothetical protein aq_2013 from Aquifex aeolicus VF5
To be Published
2P5C
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BU of 2p5c by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Taketa, M, Ono, N, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-15
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P6H
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Crystal structure of hypothetical protein APE1520 from Aeropyrum pernix K1
Descriptor: Hypothetical protein, SULFATE ION
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-18
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of hypothetical protein APE1520 from Aeropyrum pernix K1
To be Published
2PA6
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Crystal structure of MJ0232 from Methanococcus jannaschii
Descriptor: Enolase
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-27
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of MJ0232 from Methanococcus jannaschii
To be Published
2P6D
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BU of 2p6d by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-17
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
1YYA
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BU of 1yya by Molmil
Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8
Descriptor: PHOSPHATE ION, SODIUM ION, triosephosphate isomerase
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-24
Release date:2005-03-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of TT0473, putative Triosephosphate Isomerase from Thermus thermophilus HB8
To be Published
1WR8
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BU of 1wr8 by Molmil
Crystal structure of hypothetical protein PH1421 from Pyrococcus horikoshii.
Descriptor: ACETATE ION, Phosphoglycolate phosphatase
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-10-13
Release date:2004-10-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a haloacid dehalogenase superfamily phosphatase PH1421 from Pyrococcus horikoshii OT3: oligomeric state and thermoadaptation mechanism.
Acta Crystallogr.,Sect.D, 64, 2008
1ZJJ
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BU of 1zjj by Molmil
Crystal structure of hypothetical protein PH1952 from Pyrococcus horikoshii OT3
Descriptor: MAGNESIUM ION, hypothetical protein PH1952
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-04-29
Release date:2006-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of hypothetical protein PH1952 from Pyrococcus horikoshii OT3
To be Published
1ZZG
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BU of 1zzg by Molmil
Crystal structure of hypothetical protein TT0462 from Thermus thermophilus HB8
Descriptor: glucose-6-phosphate isomerase
Authors:Yamamoto, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-14
Release date:2006-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of hypothetical protein TT0462 from Thermus thermophilus HB8
To be Published
2P6L
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BU of 2p6l by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Matsuura, Y, Ono, N, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-19
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P9F
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BU of 2p9f by Molmil
Crystal structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase, GLYCEROL
Authors:Yamamoto, H, Taketa, M, Kageyama, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-25
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
2P6I
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BU of 2p6i by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Matsuura, Y, Morikawa, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-18
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P6K
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BU of 2p6k by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, diphthine synthase
Authors:Yamamoto, H, Matsuura, Y, Ono, N, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-18
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P9D
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BU of 2p9d by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: FORMIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Yamamoto, H, Taketa, M, Morikawa, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-25
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2PB6
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BU of 2pb6 by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: FORMIC ACID, GLYCEROL, Probable diphthine synthase, ...
Authors:Yamamoto, H, Taketa, M, Ono, N, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2PCK
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BU of 2pck by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Yamamoto, H, Morikawa, Y, Matsuura, Y, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
2P6O
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BU of 2p6o by Molmil
Crystal structure of TTHB049 from Thermus thermophilus HB8
Descriptor: Alpha-ribazole-5'-phosphate phosphatase
Authors:Yamamoto, H, Taketa, M, Tanaka, Y, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-19
Release date:2007-09-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of TTHB049 from Thermus thermophilus HB8
To be Published
2PCI
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BU of 2pci by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Yamamoto, H, Matsuura, Y, Morikawa, Y, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published

 

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