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4S25
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BU of 4s25 by Molmil
Crystal structure of Arabidopsis thaliana ThiC with bound imidazole ribonucleotide, S-adenosylhomocysteine, Fe4S4 cluster and Zn (trigonal crystal form)
Descriptor: 1,4-BUTANEDIOL, 1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole, CHLORIDE ION, ...
Authors:Fenwick, M.K, Mehta, A.P, Zhang, Y, Abdelwahed, S, Begley, T.P, Ealick, S.E.
Deposit date:2015-01-19
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.
Nat Commun, 6
7OFV
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BU of 7ofv by Molmil
NMR-guided design of potent and selective EphA4 agonistic ligands
Descriptor: ACETATE ION, EphA4 agonist ligand, Ephrin type-A receptor 4
Authors:Ganichkin, O.M, Craig, T.K, Baggio, C, Pellecchia, M.
Deposit date:2021-05-05
Release date:2021-08-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:NMR-Guided Design of Potent and Selective EphA4 Agonistic Ligands.
J.Med.Chem., 64, 2021
4TRM
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BU of 4trm by Molmil
Structure of the apo form of InhA from Mycobacterium tuberculosis
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Chollet, A, Julien, S, Mourey, L, Maveyraud, L.
Deposit date:2014-06-17
Release date:2015-04-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the enoyl-ACP reductase of Mycobacterium tuberculosis (InhA) in the apo-form and in complex with the active metabolite of isoniazid pre-formed by a biomimetic approach.
J.Struct.Biol., 190, 2015
5YE9
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BU of 5ye9 by Molmil
The crystal structure of Lp-PLA2 in complex with a novel inhibitor
Descriptor: N-[4-[(3-cyano-4-naphthalen-2-yloxy-phenyl)sulfamoyl]phenyl]ethanamide, Platelet-activating factor acetylhydrolase, SULFATE ION
Authors:Liu, Q.F, Xu, Y.C.
Deposit date:2017-09-15
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.876 Å)
Cite:Structure-Guided Discovery of Novel, Potent, and Orally Bioavailable Inhibitors of Lipoprotein-Associated Phospholipase A2.
J. Med. Chem., 60, 2017
4RKE
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BU of 4rke by Molmil
Drosophila melanogaster Rab2 bound to GMPPNP
Descriptor: GH01619p, MAGNESIUM ION, PENTAETHYLENE GLYCOL, ...
Authors:Lardong, J.A, Driller, J.H, Depner, H, Weise, C, Petzoldt, A, Wahl, M.C, Sigrist, S.J, Loll, B.
Deposit date:2014-10-13
Release date:2014-12-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.0006 Å)
Cite:Structures of Drosophila melanogaster Rab2 and Rab3 bound to GMPPNP.
Acta Crystallogr F Struct Biol Commun, 71, 2015
7NY0
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BU of 7ny0 by Molmil
Solution structure of Boskar4; a de novo designed G-CSF agonist
Descriptor: Boskar4
Authors:ElGamacy, M, Coles, M.
Deposit date:2021-03-19
Release date:2021-10-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A topological refactoring design strategy yields highly stable granulopoietic proteins.
Nat Commun, 13, 2022
7NXP
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BU of 7nxp by Molmil
Structure of the C-terminal domain of the pUL77 capsid protein from human cytomegalovirus (HCMV)
Descriptor: Capsid vertex component 2, GLYCEROL
Authors:Naniima, P, Legrand, P, Krey, T.
Deposit date:2021-03-19
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Assembly of infectious Kaposi's sarcoma-associated herpesvirus progeny requires formation of a pORF19 pentamer.
Plos Biol., 19, 2021
7OJ6
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BU of 7oj6 by Molmil
Crystal structure of Pseudomonas aeruginosa LpxA in complex with compound 1
Descriptor: 2-[2-(2-chlorophenyl)sulfanylethanoyl-[[4-(1,2,4-triazol-1-yl)phenyl]methyl]amino]-N-methyl-ethanamide, ACETATE ION, Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase, ...
Authors:Ryan, M.D, Parkes, A.L, Southey, M, Andersen, O.A, Zahn, M, Barker, J, DeJonge, B.L.M.
Deposit date:2021-05-14
Release date:2021-10-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Discovery of Novel UDP- N -Acetylglucosamine Acyltransferase (LpxA) Inhibitors with Activity against Pseudomonas aeruginosa .
J.Med.Chem., 64, 2021
5Y9T
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BU of 5y9t by Molmil
Crystal Structure of EGFR T790M mutant in complex with naquotinib
Descriptor: 6-ethyl-3-[[4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]amino]-5-[(3R)-1-prop-2-enoylpyrrolidin-3-yl]oxy-pyrazin e-2-carboxamide, Epidermal growth factor receptor
Authors:Mimasu, S, Tomimoto, Y, Maiko, I, Yasushi, A, Tatsuya, N.
Deposit date:2017-08-28
Release date:2018-07-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Pharmacological and Structural Characterizations of Naquotinib, a Novel Third-Generation EGFR Tyrosine Kinase Inhibitor, inEGFR-Mutated Non-Small Cell Lung Cancer.
Mol. Cancer Ther., 17, 2018
5YE7
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BU of 5ye7 by Molmil
The crystal structure of Lp-PLA2 in complex with a novel inhibitor
Descriptor: N-[4-[(4-naphthalen-2-yloxyphenyl)sulfamoyl]phenyl]ethanamide, Platelet-activating factor acetylhydrolase, SULFATE ION
Authors:Liu, Q.F, Xu, Y.C.
Deposit date:2017-09-15
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.312 Å)
Cite:Structure-Guided Discovery of Novel, Potent, and Orally Bioavailable Inhibitors of Lipoprotein-Associated Phospholipase A2.
J. Med. Chem., 60, 2017
5YGG
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BU of 5ygg by Molmil
Crystal structure of Fructokinase Double-Mutant (T261C-H108C) from Vibrio cholerae O395 in fructose, ADP and potassium ion bound form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, Fructokinase, ...
Authors:Chatterjee, S, Paul, R, Nath, S, Sen, U.
Deposit date:2017-09-22
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.671 Å)
Cite:Large-scale conformational changes and redistribution of surface negative charge upon sugar binding dictate the fidelity of phosphorylation in Vibrio cholerae fructokinase.
Sci Rep, 8, 2018
4TRJ
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BU of 4trj by Molmil
Crystal structure of Mycobacterium tuberculosis enoyl reductase (INHA) complexed with N-(3-bromophenyl)-1-cyclohexyl-5-oxopyrrolidine-3-carboxamide, refined with new ligand restraints
Descriptor: (3S)-N-(3-BROMOPHENYL)-1-CYCLOHEXYL-5-OXOPYRROLIDINE-3-CARBOXAMIDE, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, X, Alian, A, Stroud, R.M, Ortiz de Montellano, P.R.
Deposit date:2014-06-17
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Pyrrolidine carboxamides as a novel class of inhibitors of enoyl acyl carrier protein reductase from Mycobacterium tuberculosis
J. Med. Chem., 2006
5YLL
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BU of 5yll by Molmil
Structure of GH113 beta-1,4-mannanase complex with M6.
Descriptor: beta-1,4-mannanase, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
Authors:Jiang, Z.Q, You, X, Yang, S.Q, Huang, P, Ma, J.W.
Deposit date:2017-10-17
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structural insights into the catalytic mechanism of a novel glycoside hydrolase family 113 beta-1,4-mannanase from Amphibacillus xylanus
J. Biol. Chem., 293, 2018
5YE8
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BU of 5ye8 by Molmil
The crystal structure of Lp-PLA2 in complex with a novel inhibitor
Descriptor: N-[3,4-bis(fluoranyl)phenyl]methanesulfonamide, Platelet-activating factor acetylhydrolase
Authors:Liu, Q.F, Xu, Y.C.
Deposit date:2017-09-15
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Structure-Guided Discovery of Novel, Potent, and Orally Bioavailable Inhibitors of Lipoprotein-Associated Phospholipase A2.
J. Med. Chem., 60, 2017
5Y3C
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BU of 5y3c by Molmil
Crystal structure of zebrafish Ccd1 DIX domain
Descriptor: Dixin-A
Authors:Terawaki, S, Shibata, N, Higuchi, Y.
Deposit date:2017-07-28
Release date:2017-09-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
5YQJ
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BU of 5yqj by Molmil
Crystal structure of the first StARkin domain of Lam4
Descriptor: Membrane-anchored lipid-binding protein LAM4
Authors:Im, Y.J, Tong, J.S.
Deposit date:2017-11-06
Release date:2018-01-31
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of sterol recognition and nonvesicular transport by lipid transfer proteins anchored at membrane contact sites
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4TQI
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BU of 4tqi by Molmil
Human transthyretin (TTR) complexed with 3-(9H-fluoren-9-ylideneaminooxy)propanoic acid in a dual binding mode
Descriptor: (2S)-3-[(9H-fluoren-9-ylideneamino)oxy]-2-methylpropanoic acid, GLYCEROL, Transthyretin
Authors:Stura, E.A, Ciccone, L, Nencetti, S, Rossello, A, Orlandini, E.
Deposit date:2014-06-11
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:X-ray crystal structure and activity of fluorenyl-based compounds as transthyretin fibrillogenesis inhibitors.
J Enzyme Inhib Med Chem, 2015
4S2X
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BU of 4s2x by Molmil
Structure of E. coli RppH bound to RNA and two magnesium ions
Descriptor: MAGNESIUM ION, RNA (5'-R(*(APC)*GP*U)-3'), RNA pyrophosphohydrolase, ...
Authors:Vasilyev, N, Serganov, A.
Deposit date:2015-01-23
Release date:2015-02-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of RNA Complexes with the Escherichia coli RNA Pyrophosphohydrolase RppH Unveil the Basis for Specific 5'-End-dependent mRNA Decay.
J.Biol.Chem., 290, 2015
4TT9
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BU of 4tt9 by Molmil
Structure of the C-terminal SpoA domain of Shigella flexneri Spa33
Descriptor: 1,2-ETHANEDIOL, Surface presentation of antigens protein SpaO
Authors:McDowell, M.A, Johnson, S, Lea, S.M.
Deposit date:2014-06-20
Release date:2015-06-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterisation of Shigella Spa33 and Thermotoga FliM/N reveals a new model for C-ring assembly in T3SS.
Mol.Microbiol., 99, 2016
5Y3B
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BU of 5y3b by Molmil
Crystal structure of mouse Ccd1 DIX domain
Descriptor: Dixin
Authors:Terawaki, S, Shibata, N, Higuchi, Y.
Deposit date:2017-07-28
Release date:2017-09-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Ccd1 auto-inhibition in the Wnt pathway through homomerization of the DIX domain.
Sci Rep, 7, 2017
4RKG
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BU of 4rkg by Molmil
Structure of the MSL2 CXC domain bound with a non-specific (GC)6 DNA
Descriptor: DNA (5'-D(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3'), E3 ubiquitin-protein ligase msl-2, ZINC ION
Authors:Zheng, S, Ye, K.
Deposit date:2014-10-13
Release date:2015-01-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation.
Genes Dev., 28, 2014
5YEA
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BU of 5yea by Molmil
The crystal structure of Lp-PLA2 in complex with a novel inhibitor
Descriptor: 4-[[4-[4-chloranyl-3-(trifluoromethyl)phenoxy]-3-cyano-phenyl]sulfamoyl]benzoic acid, Platelet-activating factor acetylhydrolase, SULFATE ION
Authors:Liu, Q.F, Xu, Y.C.
Deposit date:2017-09-15
Release date:2018-07-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Structure-Guided Discovery of Novel, Potent, and Orally Bioavailable Inhibitors of Lipoprotein-Associated Phospholipase A2.
J. Med. Chem., 60, 2017
5YLI
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BU of 5yli by Molmil
Complex structure of GH113 beta-1,4-mannanase
Descriptor: beta-1,4-mannanas, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
Authors:Jiang, Z.Q, You, X, Yang, S.Q, Huang, P, Ma, J.W.
Deposit date:2017-10-17
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Structural insights into the catalytic mechanism of a novel glycoside hydrolase family 113 beta-1,4-mannanase from Amphibacillus xylanus
J. Biol. Chem., 293, 2018
4RVE
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BU of 4rve by Molmil
THE CRYSTAL STRUCTURE OF ECORV ENDONUCLEASE AND OF ITS COMPLEXES WITH COGNATE AND NON-COGNATE DNA SEGMENTS
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*AP*TP*CP*CP*C)-3'), PROTEIN (ECO RV (E.C.3.1.21.4))
Authors:Winkler, F.K, Banner, D.W, Oefner, C, Tsernoglou, D, Brown, R.S, Heathman, S.P, Bryan, R.K, Martin, P.D, Petratos, K, Wilso, K.S.
Deposit date:1993-02-18
Release date:1993-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments.
EMBO J., 12, 1993
4RZL
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BU of 4rzl by Molmil
DNA recognition domain of the cytosine modification-dependent restriction endonuclease LpnPI
Descriptor: PENTAETHYLENE GLYCOL, Restriction endonuclease LpnPI
Authors:Sasnauskas, G, Tamulaitiene, G, Siksnys, V.
Deposit date:2014-12-22
Release date:2015-06-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided sequence specificity engineering of the modification-dependent restriction endonuclease LpnPI.
Nucleic Acids Res., 43, 2015

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