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2MUU
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BU of 2muu by Molmil
The Proteolytic Activity of Ubiquitin-specific Protease 28 Is Modulated by the N-terminal Domain
Descriptor: Ubiquitin carboxyl-terminal hydrolase 28
Authors:Wen, Y, Shi, L, Zhang, N.
Deposit date:2014-09-17
Release date:2016-04-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The N-terminal ubiquitin-binding region of ubiquitin-specific protease 28 modulates its deubiquitination function: NMR structural and mechanistic insights.
Biochem.J., 471, 2015
2N0T
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BU of 2n0t by Molmil
Structural ensemble of the enzyme cyclophilin reveals an orchestrated mode of action at atomic resolution
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Chi, C.N, Voegeli, B, Bibow, S, Strotz, D, Orts, J, Guntert, P, Riek, R.
Deposit date:2015-03-13
Release date:2015-08-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Structural Ensemble for the Enzyme Cyclophilin Reveals an Orchestrated Mode of Action at Atomic Resolution.
Angew.Chem.Int.Ed.Engl., 54, 2015
4CEG
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BU of 4ceg by Molmil
Crystal structure of Aurora A 122-403 C290A, C393A bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, AURORA KINASE A, CHLORIDE ION, ...
Authors:Burgess, S.G, Bayliss, R.
Deposit date:2013-11-11
Release date:2015-01-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of C290A:C393A Aurora a Provides Structural Insights Into Kinase Regulation.
Acta Crystallogr.,Sect.F, 71, 2015
2MS4
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BU of 2ms4 by Molmil
Cyclophilin a complexed with a fragment of crk-ii
Descriptor: Peptide, Peptidyl-prolyl cis-trans isomerase A
Authors:Jankowski, W, Saleh, T, Rossi, P, Kalodimos, C.
Deposit date:2014-07-22
Release date:2015-09-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Cyclophilin A promotes cell migration via the Abl-Crk signaling pathway.
Nat.Chem.Biol., 12, 2016
2MQ6
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BU of 2mq6 by Molmil
Solution structure of Y125F mutant of eRF1 N-domain
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Pillay, S, Li, Y, Wong, L, Pervushin, K.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
3F2U
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BU of 3f2u by Molmil
Crystal structure of human chromobox homolog 1 (CBX1)
Descriptor: Chromobox protein homolog 1
Authors:Amaya, M.F, Ravichandran, M, Tempel, W, Wernimont, A.K, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Botchkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2008-10-30
Release date:2008-11-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of the complex of human chromobox homolog 1 (CBX1)
To be Published
2N3O
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BU of 2n3o by Molmil
Structure of PTB RRM1(41-163) bound to an RNA stemloop containing a structured loop derived from viral internal ribosomal entry site RNA
Descriptor: Polypyrimidine tract-binding protein 1, RNA (5'-R(*GP*GP*GP*AP*CP*CP*UP*GP*GP*UP*CP*UP*UP*UP*CP*CP*AP*GP*GP*UP*CP*CP*C)-3')
Authors:Maris, C, Jayne, S.F, Damberger, F.F, Ravindranathan, S, Allain, F.H.-T.
Deposit date:2015-06-08
Release date:2016-08-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:C-terminal helix folding upon pyrimidine-rich hairpin binding to PTB RRM1. Implications for PTB function in Encephalomyocarditis virus IRES activity.
To be Published
4CCN
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BU of 4ccn by Molmil
60S ribosomal protein L8 histidine hydroxylase (NO66 L299C/C300S) in complex with Mn(II), N-oxalylglycine (NOG) and 60S ribosomal protein L8 (RPL8 G220C) peptide fragment (complex-2)
Descriptor: 1,2-ETHANEDIOL, 60S RIBOSOMAL PROTEIN L8, BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE NO66, ...
Authors:Chowdhury, R, Schofield, C.J.
Deposit date:2013-10-23
Release date:2014-05-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Ribosomal oxygenases are structurally conserved from prokaryotes to humans.
Nature, 510, 2014
7N1R
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BU of 7n1r by Molmil
A novel and unique ATP hydrolysis to AMP by a human Hsp70 BiP
Descriptor: ADENOSINE MONOPHOSPHATE, DI(HYDROXYETHYL)ETHER, Endoplasmic reticulum chaperone BiP, ...
Authors:Yang, J, Musayev, F, Liu, Q.
Deposit date:2021-05-28
Release date:2022-01-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:A novel and unique ATP hydrolysis to AMP by a human Hsp70 Binding immunoglobin protein (BiP).
Protein Sci., 31, 2022
2NLU
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BU of 2nlu by Molmil
Domain-Swapped Dimer of the PWWP Module of Human Hepatoma-derived Growth Factor
Descriptor: Hepatoma-derived growth factor
Authors:Sue, S.C, Lee, W.T, Huang, T.H.
Deposit date:2006-10-20
Release date:2007-09-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:PWWP module of human hepatoma-derived growth factor forms a domain-swapped dimer with much higher affinity for heparin
J.Mol.Biol., 367, 2007
2N3K
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BU of 2n3k by Molmil
Human Brd4 ET domain in complex with MLV Integrase C-term
Descriptor: Bromodomain-containing protein 4, MLV integrase
Authors:Crowe, B.L, Foster, M.P.
Deposit date:2015-06-03
Release date:2016-03-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the Brd4 ET domain bound to a C-terminal motif from gamma-retroviral integrases reveals a conserved mechanism of interaction.
Proc.Natl.Acad.Sci.USA, 113, 2016
7N40
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BU of 7n40 by Molmil
Crystal structure of LIN9-RbAp48-LIN37, a MuvB subcomplex
Descriptor: Histone-binding protein RBBP4, Isoform 2 of Protein lin-9 homolog, Protein lin-37 homolog
Authors:Asthana, A, Ramanan, P, Tripathi, S.M, Rubin, S.M.
Deposit date:2021-06-02
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The MuvB complex binds and stabilizes nucleosomes downstream of the transcription start site of cell-cycle dependent genes.
Nat Commun, 13, 2022
3F9W
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BU of 3f9w by Molmil
Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y334F / H4-Lys20 / AdoHcy
Descriptor: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
Deposit date:2008-11-14
Release date:2008-11-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3F8I
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BU of 3f8i by Molmil
Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21
Descriptor: 5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3', E3 ubiquitin-protein ligase UHRF1
Authors:Hashimoto, H, Horton, J.R, Zhang, X, Cheng, X.
Deposit date:2008-11-12
Release date:2009-01-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications.
Epigenetics, 4, 2009
4E5Z
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BU of 4e5z by Molmil
Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair
Descriptor: AP24 DNA complementary strand, AP24 DNA strand, DNA damage-binding protein 1, ...
Authors:Yeh, J.I, Du, S.
Deposit date:2012-03-15
Release date:2012-08-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
3F9Y
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BU of 3f9y by Molmil
Structural Insights into Lysine Multiple Methylation by SET Domain Methyltransferases, SET8-Y334F / H4-Lys20me1 / AdoHcy
Descriptor: Histone H4, Histone-lysine N-methyltransferase SETD8, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Couture, J.-F, Dirk, L.M.A, Brunzelle, J.S, Houtz, R.L, Trievel, R.C.
Deposit date:2008-11-14
Release date:2008-11-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural origins for the product specificity of SET domain protein methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2NP8
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BU of 2np8 by Molmil
Structural Basis for the Inhibition of Aurora A Kinase by a Novel Class of High Affinity Disubstituted Pyrimidine Inhibitors
Descriptor: N-{3-[(4-{[3-(TRIFLUOROMETHYL)PHENYL]AMINO}PYRIMIDIN-2-YL)AMINO]PHENYL}CYCLOPROPANECARBOXAMIDE, SULFATE ION, Serine/threonine-protein kinase 6
Authors:Tari, L.W, Hoffman, I.D, Bensen, D.C, Hunter, M.J, Nix, J, Nelson, K.J, McRee, D.E, Swanson, R.V.
Deposit date:2006-10-26
Release date:2006-12-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the inhibition of Aurora A kinase by a novel class of high affinity disubstituted pyrimidine inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
7NMI
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BU of 7nmi by Molmil
Transactivation domain of p53 in complex with S100P, using annexin A2 as crystallization chaperone
Descriptor: CALCIUM ION, Cellular tumor antigen p53, GLYCEROL, ...
Authors:Ecsedi, P, Nyitray, L.
Deposit date:2021-02-23
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Transactivation domain of p53 in complex with S100P using annexin A2 as a crystallization chaperone
To Be Published
3FDE
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BU of 3fde by Molmil
Mouse UHRF1 SRA domain bound with hemi-methylated CpG DNA, crystal structure in space group C222(1) at 1.4 A resolution
Descriptor: 1,2-ETHANEDIOL, 5'-D(*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3', 5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3', ...
Authors:Hashimoto, H, Horton, J.R, Zhang, X, Cheng, X.
Deposit date:2008-11-25
Release date:2009-01-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:UHRF1, a modular multi-domain protein, regulates replication-coupled crosstalk between DNA methylation and histone modifications.
Epigenetics, 4, 2009
4ES0
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BU of 4es0 by Molmil
X-ray structure of WDR5-SETd1b Win motif peptide binary complex
Descriptor: Histone-lysine N-methyltransferase SETD1B, WD repeat-containing protein 5
Authors:Dharmarajan, V, Lee, J.-H, Patel, A, Skalnik, D.G, Cosgrove, M.S.
Deposit date:2012-04-21
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.817 Å)
Cite:Structural basis for WDR5 interaction (Win) motif recognition in human SET1 family histone methyltransferases.
J.Biol.Chem., 287, 2012
2ND0
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BU of 2nd0 by Molmil
Solution NMR structures of BRD4 ET domain with LANA peptide
Descriptor: Bromodomain-containing protein 4, LANA
Authors:Zeng, L, Zhou, M.
Deposit date:2016-04-18
Release date:2016-06-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Mechanism of Transcriptional Regulator NSD3 Recognition by the ET Domain of BRD4.
Structure, 24, 2016
2NML
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BU of 2nml by Molmil
Crystal structure of HEF2/ERH at 1.55 A resolution
Descriptor: Enhancer of rudimentary homolog
Authors:Jin, T.C, Guo, F, Serebriiskii, I.G, Howard, A.J, Zhang, Y.Z.
Deposit date:2006-10-21
Release date:2006-10-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A 1.55 A resolution X-ray crystal structure of HEF2/ERH and insights into its transcriptional and cell-cycle interaction networks.
Proteins, 68, 2007
3FC2
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BU of 3fc2 by Molmil
PLK1 in complex with BI6727
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Bader, G.
Deposit date:2008-11-21
Release date:2009-05-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:BI 6727, A Polo-like Kinase Inhibitor with Improved Pharmacokinetic Profile and Broad Antitumor Activity.
Clin.Cancer Res., 15, 2009
4D5N
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BU of 4d5n by Molmil
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state
Descriptor: CRICKET PARALYSIS VIRUS IRES RNA, EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1
Authors:Muhs, M, Hilal, T, Mielke, T, Skabkin, M.A, Sanbonmatsu, K.Y, Pestova, T.V, Spahn, C.M.T.
Deposit date:2014-11-06
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Cryo-Em of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus Ires.
Mol.Cell, 57, 2015
7N5U
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BU of 7n5u by Molmil
ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 21)
Descriptor: DNA Strain II, DNA Strand I, ZINC ION, ...
Authors:Horton, J.R, Ren, R, Cheng, X.
Deposit date:2021-06-06
Release date:2022-06-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023

223790

数据于2024-08-14公开中

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