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5AZ8
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BU of 5az8 by Molmil
Crystal structure of MBP-Tom20 fusion protein tethered with ALDH presequence via a disulfide bond
Descriptor: ACETYLAMINO-ACETIC ACID, Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Matsuoka, R, Kohda, D.
Deposit date:2015-09-27
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rational design of crystal contact-free space in protein crystals for analyzing spatial distribution of motions within protein molecules.
Protein Sci., 25, 2016
5AZ9
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BU of 5az9 by Molmil
Crystal structure of (5-residue deleted)MBP-Tom20 fusion protein tethered with ALDH presequence via a disulfide bond
Descriptor: Maltose-binding periplasmic protein,Mitochondrial import receptor subunit TOM20 homolog
Authors:Matsuoka, R, Kohda, D.
Deposit date:2015-09-27
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Rational design of crystal contact-free space in protein crystals for analyzing spatial distribution of motions within protein molecules.
Protein Sci., 25, 2016
6IJZ
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BU of 6ijz by Molmil
Structure of a plant cation channel
Descriptor: Calcium permeable stress-gated cation channel 1
Authors:Sun, L, Wang, J, Liu, X.
Deposit date:2018-10-12
Release date:2018-12-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Structure of the hyperosmolality-gated calcium-permeable channel OSCA1.2.
Nat Commun, 9, 2018
6I2N
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BU of 6i2n by Molmil
Helical RNA-bound Hantaan virus nucleocapsid
Descriptor: Nucleoprotein, RNA (5'-R(P*UP*UP*U)-3')
Authors:Arragain, B, Reguera, J, Desfosses, A, Gutsche, I, Schoehn, G, Malet, H.
Deposit date:2018-11-01
Release date:2019-01-23
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:High resolution cryo-EM structure of the helical RNA-bound Hantaan virus nucleocapsid reveals its assembly mechanisms.
Elife, 8, 2019
7TRJ
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BU of 7trj by Molmil
The eukaryotic translation initiation factor 2B from Homo sapiens with a H160D mutation in the beta subunit
Descriptor: Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, ...
Authors:Wang, L, Schoof, M, Lawrence, R, Boone, M, Frost, A, Walter, P.
Deposit date:2022-01-29
Release date:2022-04-27
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A point mutation in the nucleotide exchange factor eIF2B constitutively activates the integrated stress response by allosteric modulation.
Elife, 11, 2022
7E8D
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BU of 7e8d by Molmil
NSD2 E1099K mutant bound to nucleosome
Descriptor: DNA (185-MER), Histone H2A type 1, Histone H2B type 1-J, ...
Authors:Sengoku, T, Sato, K, Nishizawa, T, Nureki, O, Ogata, K.
Deposit date:2021-03-01
Release date:2021-11-10
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of the regulation of the normal and oncogenic methylation of nucleosomal histone H3 Lys36 by NSD2.
Nat Commun, 12, 2021
7LP5
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BU of 7lp5 by Molmil
Structure of Nedd4L WW3 domain
Descriptor: Angiomotin,E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
7EH7
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BU of 7eh7 by Molmil
Cryo-EM structure of the octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
Authors:Minato, T, Teramoto, T, Adachi, N, Hung, N.K, Yamada, K, Kawasaki, M, Akutsu, M, Moriya, T, Senda, T, Ogo, S, Kakuta, Y, Yoon, K.S.
Deposit date:2021-03-28
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (3.71 Å)
Cite:Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
7EH8
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BU of 7eh8 by Molmil
Cryo-EM structure of the hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
Descriptor: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
Authors:Minato, T, Teramoto, T, Adachi, N, Hung, N.K, Yamada, K, Kawasaki, M, Akutsu, M, Moriya, T, Senda, T, Ogo, S, Kakuta, Y, Yoon, K.S.
Deposit date:2021-03-28
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
5IC6
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BU of 5ic6 by Molmil
Crystal structure of caspase-7 DEVE peptide complex
Descriptor: Caspase-7 subunit p11, Caspase-7 subunit p20, DEVE peptide
Authors:Seaman, J.E, Julien, O, Lee, P.S, Rettenmaier, T.J, Thomsen, N.D, Wells, J.A.
Deposit date:2016-02-22
Release date:2016-07-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cacidases: caspases can cleave after aspartate, glutamate and phosphoserine residues.
Cell Death Differ., 23, 2016
6K4M
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BU of 6k4m by Molmil
Cryo-EM structure of Holo-bacterioferritin form-II from Streptomyces coelicolor
Descriptor: Bacterioferritin, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2019-05-24
Release date:2021-02-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Cryo-EM structure of Bacterioferritin from Streptomyces coelicolor
To Be Published
2OZS
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BU of 2ozs by Molmil
Crystal structure of RB69 gp43 in complex with DNA with dATP opposite dTMP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA polymerase, MAGNESIUM ION, ...
Authors:Zahn, K.E, Belrhali, H, Wallace, S.S, Doublie, S.
Deposit date:2007-02-27
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Caught bending the a-rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide.
Biochemistry, 46, 2007
7CFT
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BU of 7cft by Molmil
Cryo-EM strucutre of human acid-sensing ion channel 1a in complex with snake toxin Mambalgin1 at pH 8.0
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acid-sensing ion channel 1, Mambalgin-1
Authors:Sun, D.M, Liu, S.L, Li, S.Y, Yang, F, Tian, C.L.
Deposit date:2020-06-28
Release date:2020-10-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural insights into human acid-sensing ion channel 1a inhibition by snake toxin mambalgin1.
Elife, 9, 2020
2OZM
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BU of 2ozm by Molmil
Crystal structure of RB69 gp43 in complex with DNA with 5-NITP opposite an abasic site analog
Descriptor: 1-{2-DEOXY-5-O-[(R)-HYDROXY{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}PHOSPHORYL]-BETA-D-ERYTHRO-PENTOFURANOSYL}-5-NITRO -1H-INDOLE, DNA polymerase, MAGNESIUM ION, ...
Authors:Zahn, K.E, Belrhali, H, Wallace, S.S, Doublie, S.
Deposit date:2007-02-26
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Caught Bending the A-Rule: crystal structures of translesion DNA synthesis with a non-natural nucleotide
Biochemistry, 46, 2007
7CPY
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BU of 7cpy by Molmil
Lovastatin nonaketide synthase with LovC
Descriptor: Lovastatin nonaketide synthase, enoyl reductase component lovC, polyketide synthase component, ...
Authors:Wang, J, Wang, Z.
Deposit date:2020-08-08
Release date:2021-01-13
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for the biosynthesis of lovastatin.
Nat Commun, 12, 2021
7CN0
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BU of 7cn0 by Molmil
Cryo-EM structure of K+-bound hERG channel
Descriptor: POTASSIUM ION, potassium channel 1
Authors:Asai, T, Adachi, N, Moriya, T, Kawasaki, M, Suzuki, K, Senda, T, Murata, T.
Deposit date:2020-07-29
Release date:2021-01-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM Structure of K + -Bound hERG Channel Complexed with the Blocker Astemizole.
Structure, 29, 2021
7LOH
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BU of 7loh by Molmil
Structure of the HIV-1 gp41 transmembrane domain and cytoplasmic tail
Descriptor: Transmembrane protein gp41
Authors:Piai, A, Fu, Q, Sharp, A.K, Bighi, B, Brown, A.M, Chou, J.J.
Deposit date:2021-02-10
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Model of the Entire Membrane-Interacting Region of the HIV-1 Fusion Protein and Its Perturbation of Membrane Morphology.
J.Am.Chem.Soc., 143, 2021
7CHK
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BU of 7chk by Molmil
Cryo-EM Structure of Apple Latent Spherical Virus (ALSV)
Descriptor: VP20 protein, VP24 protein, VP25 protein
Authors:Naitow, H, Hamaguchi, T, Maki-Yonekura, S, Isogai, M, Yoshikawa, N, Yonekura, K.
Deposit date:2020-07-06
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Apple latent spherical virus structure with stable capsid frame supports quasi-stable protrusions expediting genome release.
Commun Biol, 3, 2020
7CCS
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BU of 7ccs by Molmil
Consensus mutated xCT-CD98hc complex
Descriptor: 4F2 cell-surface antigen heavy chain, Consensus mutated Anionic Amino Acid Transporter Light Chain, Xc- System
Authors:Oda, K, Lee, Y, Takemoto, M, Yamashita, K, Nishizawa, T, Nureki, O.
Deposit date:2020-06-17
Release date:2020-12-09
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Consensus mutagenesis approach improves the thermal stability of system x c - transporter, xCT, and enables cryo-EM analyses.
Protein Sci., 29, 2020
6HUJ
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BU of 6huj by Molmil
CryoEM structure of human full-length heteromeric alpha1beta3gamma2L GABA(A)R in complex with picrotoxin, GABA and megabody Mb38.
Descriptor: (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-2a-hydroxy-8b-methyl-9-(prop-1-en-2-yl)hexahydro-3,6-methano-1,5,7-trioxacyclopenta[ij]c yclopropa[a]azulene-4,8(3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Masiulis, S, Desai, R, Uchanski, T, Serna Martin, I, Laverty, D, Karia, D, Malinauskas, T, Jasenko, Z, Pardon, E, Kotecha, A, Steyaert, J, Miller, K.W, Aricescu, A.R.
Deposit date:2018-10-08
Release date:2019-01-02
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:GABAAreceptor signalling mechanisms revealed by structural pharmacology.
Nature, 565, 2019
5BX0
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BU of 5bx0 by Molmil
An Automated Microscale Thermophoresis Screening Approach for Fragment-Based Lead Discovery
Descriptor: Dual specificity mitogen-activated protein kinase kinase 1, ethyl 2H-indazole-5-carboxylate
Authors:Vallee, F, Steier, V, Rak, A.
Deposit date:2015-06-08
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:An Automated Microscale Thermophoresis Screening Approach for Fragment-Based Lead Discovery.
J Biomol Screen, 21, 2016
6KNF
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BU of 6knf by Molmil
CryoEM map and model of Nitrite Reductase at pH 6.2
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:Adachi, N, Yamaguchi, T, Moriya, T, Kawasaki, M, Koiwai, K, Shinoda, A, Yamada, Y, Yumoto, F, Kohzuma, T, Senda, T.
Deposit date:2019-08-05
Release date:2020-08-12
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:2.85 and 2.99 angstrom resolution structures of 110 kDa nitrite reductase determined by 200 kV cryogenic electron microscopy.
J.Struct.Biol., 213, 2021
6K43
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BU of 6k43 by Molmil
Cryo-EM structure of Holo-bacterioferritin-form-I from Streptomyces coelicolor
Descriptor: Bacterioferritin, FE (II) ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2019-05-23
Release date:2021-02-03
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of Apo-bacterioferritin from Streptomyces coelicolor.
To Be Published
6KNG
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BU of 6kng by Molmil
CryoEM map and model of Nitrite Reductase at pH 8.1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:Adachi, N, Yamaguchi, T, Moriya, T, Kawasaki, M, Koiwai, K, Shinoda, A, Yamada, Y, Yumoto, F, Kohzuma, T, Senda, T.
Deposit date:2019-08-05
Release date:2020-08-12
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:2.85 and 2.99 angstrom resolution structures of 110 kDa nitrite reductase determined by 200 kV cryogenic electron microscopy.
J.Struct.Biol., 213, 2021
7CRQ
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BU of 7crq by Molmil
NSD3 bearing E1181K/T1232A dual mutation in complex with 187-bp NCP (2:1 binding mode)
Descriptor: DNA (168-MER), Histone H2A, Histone H2B, ...
Authors:Li, W, Tian, W, Yuan, G, Deng, P, Gozani, O, Patel, D, Wang, Z.
Deposit date:2020-08-14
Release date:2020-10-21
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular basis of nucleosomal H3K36 methylation by NSD methyltransferases.
Nature, 590, 2021

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