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7UUZ
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BU of 7uuz by Molmil
Structure of the sodium/iodide symporter (NIS) in complex with perrhenate and sodium
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, PERRHENATE, SODIUM ION, ...
Authors:Ravera, S, Nicola, J.P, Salazar-De Simone, G, Sigworth, F, Karakas, E, Amzel, L.M, Bianchet, M, Carrasco, N.
Deposit date:2022-04-29
Release date:2022-12-21
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the mechanism of the sodium/iodide symporter.
Nature, 612, 2022
2E2D
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BU of 2e2d by Molmil
Flexibility and variability of TIMP binding: X-ray structure of the complex between collagenase-3/MMP-13 and TIMP-2
Descriptor: CALCIUM ION, Matrix metallopeptidase 13, Metalloproteinase inhibitor 2, ...
Authors:Maskos, K, Lang, R, Tschesche, H, Bode, W.
Deposit date:2006-11-11
Release date:2007-03-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexibility and Variability of TIMP Binding: X-ray Structure of the Complex Between Collagenase-3/MMP-13 and TIMP-2
J.Mol.Biol., 366, 2007
7U5A
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BU of 7u5a by Molmil
Crystal structure of queuine salvage enzyme DUF2419 mutant K199C, complexed with queuosine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, MALONATE ION, Queuine salvage enzyme DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-01
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7UV0
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BU of 7uv0 by Molmil
Structure of the sodium/iodide symporter (NIS) in complex with iodide and sodium
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, IODIDE ION, SODIUM ION, ...
Authors:Ravera, S, Nicola, J.P, Salazar-De Simone, G, Sigworth, F, Karakas, E, Amzel, L.M, Bianchet, M, Carrasco, N.
Deposit date:2022-04-29
Release date:2022-12-21
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the mechanism of the sodium/iodide symporter.
Nature, 612, 2022
2EM0
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BU of 2em0 by Molmil
Solution structure of the 18th zf-C2H2 domain from human Zinc finger protein 224
Descriptor: ZINC ION, Zinc finger protein 224
Authors:Kurosaki, C, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-28
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the 18th zf-C2H2 domain from human Zinc finger protein 224
To be Published
7UQ3
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BU of 7uq3 by Molmil
JmjC domain-containing protein 5 (JMJD5) in complex with Mn and (S)-2-(1-hydroxy-2,5-dioxopyrrolidin-3-yl)acetic acid
Descriptor: Bifunctional peptidase and arginyl-hydroxylase JMJD5, GLYCEROL, MANGANESE (II) ION, ...
Authors:Chowdhury, R, Islam, M.S, Schofield, C.J.
Deposit date:2022-04-19
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural analysis of the 2-oxoglutarate binding site of the circadian rhythm linked oxygenase JMJD5.
Sci Rep, 12, 2022
2IJG
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BU of 2ijg by Molmil
Crystal Structure of cryptochrome 3 from Arabidopsis thaliana
Descriptor: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID, Cryptochrome DASH, chloroplast/mitochondrial, ...
Authors:Huang, Y, Deisenhofer, J.
Deposit date:2006-09-29
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of cryptochrome 3 from Arabidopsis thaliana and its implications for photolyase activity
Proc.Natl.Acad.Sci.Usa, 103, 2006
2IH1
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BU of 2ih1 by Molmil
Ion selectivity in a semi-synthetic K+ channel locked in the conductive conformation
Descriptor: (1S)-2-HYDROXY-1-[(NONANOYLOXY)METHYL]ETHYL MYRISTATE, FAB Heavy Chain, FAB Light Chain, ...
Authors:Valiyaveetil, F.I, Leonetti, M, Muir, T.W, MacKinnon, R.
Deposit date:2006-09-25
Release date:2006-11-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ion Selectivity in a Semisynthetic K+ Channel Locked in the Conductive Conformation.
Science, 314, 2006
2IJ7
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BU of 2ij7 by Molmil
Structure of Mycobacterium tuberculosis CYP121 in complex with the antifungal drug fluconazole
Descriptor: 2-(2,4-DIFLUOROPHENYL)-1,3-DI(1H-1,2,4-TRIAZOL-1-YL)PROPAN-2-OL, Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE
Authors:Roujeinikova, A, Leys, D.
Deposit date:2006-09-29
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Mycobacterium tuberculosis P450 CYP121-fluconazole complex reveals new azole drug-P450 binding mode.
J.Biol.Chem., 281, 2006
2ITK
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BU of 2itk by Molmil
human Pin1 bound to D-PEPTIDE
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, D-Peptide, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Noel, J.P, Zhang, Y.
Deposit date:2006-10-19
Release date:2007-05-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural basis for high-affinity peptide inhibition of human Pin1.
Acs Chem.Biol., 2, 2007
2IUX
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BU of 2iux by Molmil
Human tACE mutant g1234
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ANGIOTENSIN-CONVERTING ENZYME, ...
Authors:Watermeyer, J.M, Swell, B.T, Natesh, R, Corradi, H.R, Acharya, K.R, Sturrock, E.D.
Deposit date:2006-06-07
Release date:2006-10-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of Testis Ace Glycosylation Mutants and Evidence for Conserved Domain Movement.
Biochemistry, 45, 2006
2J62
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BU of 2j62 by Molmil
Structure of a bacterial O-glcnacase in complex with glcnacstatin
Descriptor: CHLORIDE ION, N-[(5R,6R,7R,8S)-6,7-DIHYDROXY-5-(HYDROXYMETHYL)-2-(2-PHENYLETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDIN-8-YL]-2-METHYLPROPANAMIDE, O-GlcNAcase NagJ
Authors:Dorfmueller, H.C, Borodkin, V.S, Schimpl, M, Shepherd, S.M, Shpiro, N.A, van Aalten, D.M.F.
Deposit date:2006-09-22
Release date:2007-02-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:GlcNAcstatin: a picomolar, selective O-GlcNAcase inhibitor that modulates intracellular O-glcNAcylation levels.
J. Am. Chem. Soc., 128, 2006
2IZ0
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BU of 2iz0 by Molmil
PEX inhibitor-home data
Descriptor: 1,2-ETHANEDIOL, 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
Authors:Sundaramoorthy, R, Iulek, J, Hunter, W.N.
Deposit date:2006-07-23
Release date:2007-01-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structures of a Bacterial 6- Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates.
FEBS J., 274, 2007
2IXK
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BU of 2ixk by Molmil
RmlC P aeruginosa with dTDP-4-keto rhamnnose (the product of the reaction)
Descriptor: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, DTDP-4-KETO-L-RHAMNOSE
Authors:Dong, C, Naismith, J.H.
Deposit date:2006-07-08
Release date:2006-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Rmlc, a C3' and C5' Carbohydrate Epimerase, Appears to Operate Via an Intermediate with an Unusual Twist Boat Conformation.
J.Mol.Biol., 365, 2007
2J2P
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BU of 2j2p by Molmil
L-ficolin complexed to N-acetyl-cystein (150mM)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-2, ...
Authors:Garlatti, V, Gaboriaud, C.
Deposit date:2006-08-17
Release date:2007-01-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins.
Embo J., 26, 2007
2IQ0
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BU of 2iq0 by Molmil
Crystal Structure of Aldose Reductase complexed with Hexanoic Acid
Descriptor: Aldose reductase, HEXANOIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Harrison, D.H.T, Brownlee, J.M.
Deposit date:2006-10-12
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and thermodynamic studies of simple aldose reductase-inhibitor complexes.
Bioorg.Chem., 34, 2006
2EBV
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BU of 2ebv by Molmil
Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153
Descriptor: Nuclear pore complex protein Nup153, ZINC ION
Authors:Zhang, H.P, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-09
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the third zf-RanBP domain from human Nuclear pore complex protein Nup153
to be published
2EC9
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BU of 2ec9 by Molmil
Crystal structure analysis of human Factor VIIa , Souluble tissue factor complexed with BCX-3607
Descriptor: 1,5-anhydro-D-glucitol, 2'-((5-CARBAMIMIDOYLPYRIDIN-2-YLAMINO)METHYL)-4-(ISOBUTYLCARBAMOYL)-4'-VINYLBIPHENYL-2-CARBOXYLIC ACID, CALCIUM ION, ...
Authors:Raman, K, Yarlagadda, B.
Deposit date:2007-02-13
Release date:2008-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the S2 site of factor VIIa to generate potent and selective inhibitors: the structure of BCX-3607 in complex with tissue factor-factor VIIa.
Acta Crystallogr.,Sect.D, 63, 2007
2EDI
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BU of 2edi by Molmil
Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2
Descriptor: NEDD8-conjugating enzyme UBE2F
Authors:Endo, H, Izumi, K, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-14
Release date:2007-08-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2
To be Published
7UUW
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BU of 7uuw by Molmil
Cryogenic electron microscopy 3D map of F-actin bound by the Actin Binding Domain of alpha-catenin ortholog, HMP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rangarajan, E.S, Smith, E.W, Izard, T.
Deposit date:2022-04-29
Release date:2023-01-18
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:The nematode alpha-catenin ortholog, HMP1, has an extended alpha-helix when bound to actin filaments.
J.Biol.Chem., 299, 2022
7UCX
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BU of 7ucx by Molmil
LRP8 11H1 Fab complexed to a cyclized CR1 peptide
Descriptor: 11H1 Fab Heavy chain, 11H1 Fab Light chain, Cyclized CR1 peptide, ...
Authors:Argiriadi, M.A, Deng, K, Egan, D, Gao, L, Gizatullin, F, Harlan, J, Karaoglu, D, Qiu, W, Goodearl, A.
Deposit date:2022-03-17
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The use of cyclic peptide antigens to generate LRP8 specific antibodies
Front Drug Discov (Lausanne), 2, 2023
2IC8
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BU of 2ic8 by Molmil
Crystal structure of GlpG
Descriptor: Protein glpG, nonyl beta-D-glucopyranoside
Authors:Ha, Y.
Deposit date:2006-09-12
Release date:2006-10-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a rhomboid family intramembrane protease.
Nature, 444, 2006
2IDM
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BU of 2idm by Molmil
2.00 A Structure of T87I/Y106W Phosphono-CheY
Descriptor: ACETATE ION, Chemotaxis protein cheY
Authors:Halkides, C.J, Haas, R.M, McAdams, K.A, Casper, E.S, Santarsiero, B.D, Mesecar, A.D.
Deposit date:2006-09-15
Release date:2007-09-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structures of T87I phosphono-CheY and T87I/Y106W phosphono-CheY help to explain their binding affinities to the FliM and CheZ peptides.
Arch.Biochem.Biophys., 479, 2008
2IH3
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BU of 2ih3 by Molmil
Ion selectivity in a semi-synthetic K+ channel locked in the conductive conformation
Descriptor: (1S)-2-HYDROXY-1-[(NONANOYLOXY)METHYL]ETHYL MYRISTATE, FAB Heavy Chain, FAB Light Chain, ...
Authors:Valiyaveetil, F.I, Leonetti, M, Muir, T.W, MacKinnon, R.
Deposit date:2006-09-25
Release date:2006-11-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Ion Selectivity in a Semisynthetic K+ Channel Locked in the Conductive Conformation.
Science, 314, 2006
2DXM
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BU of 2dxm by Molmil
Neutron Structure Analysis of Deoxy Human Hemoglobin
Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Morimoto, Y.
Deposit date:2006-08-28
Release date:2007-12-04
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (2.1 Å)
Cite:Protonation states of buried histidine residues in human deoxyhemoglobin revealed by neutron crystallography.
J.Am.Chem.Soc., 129, 2007

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