PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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3Q5P	Crystal structure of BmrR bound to Tetracycline Descriptor: 23 bp BmrR promoter DNA, GLYCEROL, Multidrug-efflux transporter 1 regulator, ... Authors: Bachas, S, Eginton, C, Gunio, G, Wade, H. Deposit date: 2010-12-29 Release date: 2011-06-15 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.942 Å) Cite: Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR. Proc.Natl.Acad.Sci.USA, 108, 2011
1OJL	Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding Descriptor: ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR Authors: Sallai, L, Tucker, P.A. Deposit date: 2003-07-10 Release date: 2005-05-19 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal structure of the central and C-terminal domain of the sigma(54)-activator ZraR. J. Struct. Biol., 151, 2005
3Q5S	Crystal structure of BmrR bound to Acetylcholine Descriptor: 23 bp promoter DNA, ACETYLCHOLINE, GLYCEROL, ... Authors: Bachas, S, Eginton, C, Gunio, G, Wade, H. Deposit date: 2010-12-29 Release date: 2011-06-15 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural contributions to multidrug recognition in the multidrug resistance (MDR) gene regulator, BmrR. Proc.Natl.Acad.Sci.USA, 108, 2011
2MAO	NMR structure of region 2 of E. coli sigmaE Descriptor: RNA polymerase sigma factor Authors: Campagne, S, Vorholt, J.A, Allain, F.H.-T. Deposit date: 2013-07-16 Release date: 2014-02-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural basis for -10 promoter element melting by environmentally induced sigma factors. Nat.Struct.Mol.Biol., 21, 2014
7DVT	Crystal structure of heme sensor protein PefR in complex with heme and carbon monoxide Descriptor: CARBON MONOXIDE, HTH marR-type domain-containing protein, PROTOPORPHYRIN IX CONTAINING FE Authors: Nishinaga, M, Nagai, S, Nishitani, Y, Sugimoto, H, Shiro, Y, Sawai, H. Deposit date: 2021-01-15 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival. Commun Biol, 4, 2021
7DVS	Crystal structure of Apo (heme-free) PefR Descriptor: MarR family transcriptional regulator Authors: Muraki, N, Aono, S. Deposit date: 2021-01-15 Release date: 2021-09-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival. Commun Biol, 4, 2021
6M9G	BbvCI B2 dimer with Ta6Br14 clusters Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BROMIDE ION, ... Authors: Shen, B.W, Stoddard, B.L. Deposit date: 2018-08-23 Release date: 2018-11-14 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
7KY1	Molecular basis for control of antibiotic production by a bacterial hormones Descriptor: TetR family transcriptional regulator Authors: Bhukya, H, Fulop, V. Deposit date: 2020-12-06 Release date: 2021-02-03 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.5000335 Å) Cite: Molecular basis for control of antibiotic production by a bacterial hormone. Nature, 590, 2021
6MAG	native BbvCI B2 dimer in space group C222 Descriptor: ACETATE ION, BbvCI endonuclease subunit 2, GLYCEROL, ... Authors: Shen, B.W, Stoddard, B.L. Deposit date: 2018-08-27 Release date: 2018-11-14 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.07 Å) Cite: Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI. Nucleic Acids Res., 47, 2019
6P4W	XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution Descriptor: CHLORIDE ION, DNA-dependent ATPase XPBII, Endonuclease Bax1, ... Authors: Fan, L, He, F, DuPrez, K.T. Deposit date: 2019-05-28 Release date: 2020-06-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.956 Å) Cite: XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution To Be Published
5CKT	Crystal Structure of KorA, a plasmid-encoded, global transcription regulator Descriptor: ACETATE ION, TrfB transcriptional repressor protein Authors: White, S.A, Hyde, E.I, Lovering, A.L. Deposit date: 2015-07-15 Release date: 2016-04-06 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2 Å) Cite: Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator. Nucleic Acids Res., 44, 2016
6P4O	Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA-dependent ATPase XPBII, ... Authors: Fan, L, DuPrez, K.T. Deposit date: 2019-05-28 Release date: 2020-06-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution To Be Published
6SJ7	Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to RBM39 and Indisulam Descriptor: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ... Authors: Srinivas, H. Deposit date: 2019-08-12 Release date: 2019-12-18 Last modified: 2019-12-25 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex. Nat.Chem.Biol., 16, 2020
3PQJ	Crystal Structure of the transcriptional repressor BigR from Xylella fastidiosa Descriptor: Biofilm growth-associated repressor Authors: Guimaraes, B.G, Benedetti, C.E. Deposit date: 2010-11-26 Release date: 2011-06-01 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Plant Pathogenic Bacteria Utilize Biofilm Growth-associated Repressor (BigR), a Novel Winged-helix Redox Switch, to Control Hydrogen Sulfide Detoxification under Hypoxia. J.Biol.Chem., 286, 2011
6NU3	Structural insights into unique features of the human mitochondrial ribosome recycling Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ... Authors: Sharma, M.R, Koripella, R.K, Agrawal, R.K. Deposit date: 2019-01-30 Release date: 2019-04-17 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Structural insights into unique features of the human mitochondrial ribosome recycling. Proc.Natl.Acad.Sci.USA, 116, 2019
4R6I	AtxA protein, a virulence regulator from Bacillus anthracis. Descriptor: Anthrax toxin expression trans-acting positive regulator, DODECYL-BETA-D-MALTOSIDE Authors: Osipiuk, J, Horton, L.B, Koehler, T.M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2014-08-25 Release date: 2014-10-22 Last modified: 2017-11-22 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal structure of Bacillus anthracis virulence regulator AtxA and effects of phosphorylated histidines on multimerization and activity. Mol.Microbiol., 95, 2015
6CX2	S177G Mutant of Yeast PCNA Descriptor: Proliferating cell nuclear antigen Authors: Powers, K.T. Deposit date: 2018-04-02 Release date: 2018-04-11 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.101 Å) Cite: Identification of New Mutations at the PCNA Subunit Interface that Block Translesion Synthesis. PLoS ONE, 11, 2016
7ROZ	Structure of RNA-dependent RNA polymerase 2 (RDR2) from Arabidopsis thaliana Descriptor: MAGNESIUM ION, RNA-dependent RNA polymerase 2 Authors: Fukudome, A, Pikaard, C.S, Takagi, Y. Deposit date: 2021-08-02 Release date: 2021-12-08 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2. Proc.Natl.Acad.Sci.USA, 118, 2021
7RQS	Arabidopsis RNA-dependent RNA polymerase 2 Descriptor: MAGNESIUM ION, RNA-dependent RNA polymerase 2 Authors: Fukudome, A, Pikaard, C.S, Takagi, Y. Deposit date: 2021-08-07 Release date: 2021-12-08 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.57 Å) Cite: Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2. Proc.Natl.Acad.Sci.USA, 118, 2021
6CX4	V180A Mutant of Yeast PCNA Descriptor: Proliferating cell nuclear antigen Authors: Powers, K.T. Deposit date: 2018-04-02 Release date: 2018-04-11 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.081 Å) Cite: Identification of New Mutations at the PCNA Subunit Interface that Block Translesion Synthesis. PLoS ONE, 11, 2016
5V3O	Cereblon in complex with DDB1 and CC-220 Descriptor: (3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, DNA damage-binding protein 1, Protein cereblon, ... Authors: Matyskiela, M, Pagarigan, B, Chamberlain, P. Deposit date: 2017-03-07 Release date: 2017-05-03 Last modified: 2018-02-07 Method: X-RAY DIFFRACTION (3.2 Å) Cite: A Cereblon Modulator (CC-220) with Improved Degradation of Ikaros and Aiolos. J. Med. Chem., 61, 2018
5V7K	PCNA mutant D41A/D42A Protein Defective in Gene Silencing Descriptor: Proliferating cell nuclear antigen Authors: Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M. Deposit date: 2017-03-20 Release date: 2018-03-14 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring. PLoS ONE, 13, 2018
6O71	Crystal structure of Csm6 in complex with cdA4 by soaking cdA4 into Csm6 Descriptor: Csm6, Cyclic DNA cdA4 Authors: Jia, N, Patel, D.J. Deposit date: 2019-03-07 Release date: 2019-07-31 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.55 Å) Cite: CRISPR-Cas III-A Csm6 CARF Domain Is a Ring Nuclease Triggering Stepwise cA4Cleavage with ApA>p Formation Terminating RNase Activity. Mol.Cell, 75, 2019
8E84	Human PCNA mutant- C148S Descriptor: Proliferating cell nuclear antigen Authors: Magrino, J, Page, B, Gaubitz, C, Kelch, B.A. Deposit date: 2022-08-25 Release date: 2023-04-12 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (3.1 Å) Cite: A thermosensitive PCNA allele underlies an ataxia-telangiectasia-like disorder. J.Biol.Chem., 299, 2023
7CDV	STRUCTURE OF A NOVEL VIRULENCE REGULATION FACTOR SghR Descriptor: LacI-type transcription factor Authors: Ye, F.Z, Wang, C, Yan, X.F, Zhang, L.H, Gao, Y.G. Deposit date: 2020-06-20 Release date: 2020-07-15 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis of a novel repressor, SghR, controllingAgrobacteriuminfection by cross-talking to plants. J.Biol.Chem., 295, 2020

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