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3N3K	The catalytic domain of USP8 in complex with a USP8 specific inhibitor Descriptor: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 8, ZINC ION Authors: Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Allali-Hassani, A, Lam, R, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium, Structural Genomics Consortium (SGC) Deposit date: 2010-05-20 Release date: 2010-06-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.6 Å) Cite: A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
3N30	Crystal Structure of cubic Zn3-hUb (human ubiquitin) adduct Descriptor: Ubiquitin, ZINC ION Authors: Siliqi, D, Caliandro, R, Arnesano, F, Natile, G, Falini, G, Fermani, S, Belviso, B.D. Deposit date: 2010-05-19 Release date: 2011-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic analysis of metal-ion binding to human ubiquitin. Chemistry, 17, 2011
3N32	The crystal structure of human Ubiquitin adduct with Zeise's salt Descriptor: PLATINUM (II) ION, Ubiquitin Authors: Siliqi, D, Caliandro, R, Falini, G, Fermani, S, Natile, G, Arnesano, F, Belviso, B.D. Deposit date: 2010-05-19 Release date: 2011-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.795 Å) Cite: Crystallographic analysis of metal-ion binding to human ubiquitin. Chemistry, 17, 2011
2XEW	Crystal structure of K11-linked diubiquitin Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRATE ANION, ... Authors: Bremm, A, Freund, S.M.V, Komander, D. Deposit date: 2010-05-18 Release date: 2010-07-14 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Lys11-Linked Ubiquitin Chains Adopt Compact Conformations and are Preferentially Hydrolyzed by the Deubiquitinase Cezanne Nat.Struct.Mol.Biol., 17, 2010
3AI5	Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein Descriptor: 1,2-ETHANEDIOL, yeast enhanced green fluorescent protein,Ubiquitin Authors: Suzuki, N, Wakatsuki, S, Kawasaki, M. Deposit date: 2010-05-10 Release date: 2010-09-29 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallization of small proteins assisted by green fluorescent protein Acta Crystallogr.,Sect.D, 66, 2010
3MTN	Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor Descriptor: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ... Authors: Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC) Deposit date: 2010-04-30 Release date: 2010-06-09 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A strategy for modulation of enzymes in the ubiquitin system. Science, 339, 2013
2KX3	The solution structure of the mutant of UBL domain of UBLCP1, I5M Descriptor: Ubiquitin-like domain-containing CTD phosphatase 1 Authors: Lee, N, Ko, S. Deposit date: 2010-04-23 Release date: 2011-04-27 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: The solution structure of the mutant of UBL domain of UBLCP1, I5M To be Published
2KX0	the solution structure of UBB+1, frameshift mutant of ubiquitin B Descriptor: ubiquitin B Authors: Ko, S. Deposit date: 2010-04-22 Release date: 2010-09-08 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: the solution structure of UBB+1, frameshift mutant of ubiquitin B To be Published
2KWV	Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G. Deposit date: 2010-04-20 Release date: 2010-10-06 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin. J.Biol.Chem., 286, 2011
2KWU	Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G. Deposit date: 2010-04-19 Release date: 2010-10-06 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin. J.Biol.Chem., 286, 2011
3MHS	Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Protein SUS1, ... Authors: Samara, N.L, Datta, A.B, Berndsen, C.E, Zhang, X, Yao, T, Cohen, R.E, Wolberger, C. Deposit date: 2010-04-08 Release date: 2010-04-21 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.89 Å) Cite: Structural insights into the assembly and function of the SAGA deubiquitinating module. Science, 328, 2010
2XBB	Nedd4 HECT:Ub complex Descriptor: E3 UBIQUITIN-PROTEIN LIGASE NEDD4, GLYCEROL, UBIQUITIN Authors: Maspero, E, Cecatiello, V, Musacchio, A, Polo, S, Pasqualato, S. Deposit date: 2010-04-08 Release date: 2011-03-23 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Structure of the Hect:Ubiquitin Complex and its Role in Ubiquitin Chain Elongation Embo Rep., 12, 2011
3M63	Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Dsk2 Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, Ubiquitin conjugation factor E4, ... Authors: Haenzelmann, P, Schindelin, H. Deposit date: 2010-03-15 Release date: 2010-04-28 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. J.Biol.Chem., 285, 2010
3M62	Crystal structure of Ufd2 in complex with the ubiquitin-like (UBL) domain of Rad23 Descriptor: PENTAETHYLENE GLYCOL, POTASSIUM ION, UV excision repair protein RAD23, ... Authors: Haenzelmann, P, Schindelin, H. Deposit date: 2010-03-15 Release date: 2010-04-28 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The yeast E4 ubiquitin ligase Ufd2 interacts with the ubiquitin-like domains of Rad23 and Dsk2 via a novel and distinct ubiquitin-like binding domain. J.Biol.Chem., 285, 2010
3M3J	A new crystal form of Lys48-linked diubiquitin Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Ubiquitin Authors: Trempe, J.F, Brown, N.R, Noble, M.E.M, Endicott, J.A. Deposit date: 2010-03-09 Release date: 2010-03-23 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: A new crystal form of Lys48-linked diubiquitin. Acta Crystallogr.,Sect.F, 66, 2010
2KTF	Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin Descriptor: DNA polymerase iota, Ubiquitin Authors: Cui, G, Benirschke, R, Mer, G. Deposit date: 2010-02-01 Release date: 2010-11-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota. Biochemistry, 49, 2010
3LDZ	Crystal structure of human STAM1 VHS domain in complex with ubiquitin Descriptor: Signal transducing adapter molecule 1, Ubiquitin Authors: Ren, X, Hurley, J.H. Deposit date: 2010-01-13 Release date: 2010-03-02 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.6 Å) Cite: VHS domains of ESCRT-0 cooperate in high-avidity binding to polyubiquitinated cargo. Embo J., 29, 2010
3L0W	Structure of split monoubiquitinated PCNA with ubiquitin in position two Descriptor: Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen Authors: Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. Deposit date: 2009-12-10 Release date: 2010-03-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange. Nat.Struct.Mol.Biol., 17, 2010
3L10	Structure of split monoubiquitinated PCNA with ubiquitin in position one Descriptor: Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen Authors: Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. Deposit date: 2009-12-10 Release date: 2010-03-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange. Nat.Struct.Mol.Biol., 17, 2010
3KVF	Crystal structure of the I93M mutant of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester Descriptor: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L1 Authors: Davies, C.W, Maiti, T.K, Das, C. Deposit date: 2009-11-30 Release date: 2010-06-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation. Proc.Natl.Acad.Sci.USA, 107, 2010
3KW5	Crystal structure of ubiquitin carboxy terminal hydrolase L1 bound to ubiquitin vinylmethylester Descriptor: METHYL 4-AMINOBUTANOATE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase isozyme L1 Authors: Maiti, T.K, Boudreaux, D.A, Das, C. Deposit date: 2009-11-30 Release date: 2010-06-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Ubiquitin vinyl methyl ester binding orients the misaligned active site of the ubiquitin hydrolase UCHL1 into productive conformation. Proc.Natl.Acad.Sci.USA, 107, 2010
2WYQ	THE CRYSTAL STRUCTURE OF THE UBIQUITIN-LIKE (UBL) DOMAIN OF HHR23A (HUMAN HOMOLOGUE A OF RAD23) Descriptor: SULFATE ION, UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG A Authors: Chen, Y.W. Deposit date: 2009-11-19 Release date: 2010-11-10 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.651 Å) Cite: The Crystal Structure of the Ubiquitin-Like (Ubl) Domain of Human Homologue a of Rad23 (Hhr23A) Protein Protein Eng.Des.Sel., 24, 2011
2WX1	TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked tri-ubiquitin, P212121 Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION Authors: Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D. Deposit date: 2009-10-30 Release date: 2009-11-24 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain Nat.Struct.Mol.Biol., 16, 2009
2WWZ	TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked di-ubiquitin, P212121 Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION Authors: Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D. Deposit date: 2009-10-30 Release date: 2009-11-24 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain Nat.Struct.Mol.Biol., 16, 2009
2WX0	TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked di-ubiquitin, P21 Descriptor: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION Authors: Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D. Deposit date: 2009-10-30 Release date: 2009-11-24 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain Nat.Struct.Mol.Biol., 16, 2009

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