PDB: 9760 resultsInfo pagesStatus searchChemie searchBIRD

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4AEH	Crystal structure of the anti-AaHI Fab9C2 antibody Descriptor: FAB ANTIBODY, HEAVY CHAIN, LIGHT CHAIN Authors: Fabrichny, I.P, Mondielli, G, Conrod, S, Martin-Eauclaire, M.F, Bourne, Y, Marchot, P. Deposit date: 2012-01-10 Release date: 2012-03-07 Last modified: 2012-05-02 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural Insights Into Antibody Sequestering and Neutralizing of Na+-Channel & [Alpha]-Type Modulator from Old-World Scorpion Venom J.Biol.Chem., 287, 2012
3AB0	Crystal structure of complex of the Bacillus anthracis major spore surface protein BclA with ScFv antibody fragment Descriptor: BclA protein, antibody ScFv fragment, heavy chain, ... Authors: Streltsov, V.A. Deposit date: 2009-11-28 Release date: 2010-12-01 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3.09 Å) Cite: Isolation, kinetic analysis, and structural characterization of an antibody targeting the Bacillus anthracis major spore surface protein BclA. Proteins, 79, 2011
2V7H	Crystal structure of an immunogen specific anti-mannopyranoside monoclonal antibody Fab fragment Descriptor: MONOCLONAL ANTIBODY Authors: Krishnan, L, Sahni, G, Kaur, K.J, Salunke, D.M. Deposit date: 2007-07-30 Release date: 2008-08-19 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Role of Antibody Paratope Conformational Flexibility in the Manifestation of Molecular Mimicry. Biophys.J., 94, 2008
3LEY	2F5 Epitope scaffold elicited anti-HIV-1 monoclonal antibody 6a7 in complex with HIV-1 GP41 Descriptor: 6a7 Antibody Heavy Chain, 6a7 Antibody Light Chain, Envelope glycoprotein gp41, ... Authors: Ofek, G, Guenaga, F.J, Schief, W.R, Skinner, J, Baker, D, Wyatt, R, Kwong, P.D. Deposit date: 2010-01-15 Release date: 2010-09-29 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Elicitation of structure-specific antibodies by epitope scaffolds. Proc.Natl.Acad.Sci.USA, 107, 2010
6H3H	Fab fragment of antibody against fullerene C60 Descriptor: Anti-fullerene antibody Fab fragment Heavy chain, Anti-fullerene antibody Fab fragment Light chain, GLYCEROL, ... Authors: Osipov, E.M, Tikhonova, T.V. Deposit date: 2018-07-18 Release date: 2019-05-15 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.92 Å) Cite: Structure of the Anti-C60 Fullerene Antibody Fab Fragment: Structural Determinants of Fullerene Binding. Acta Naturae, 11, 2019
5LCV	Structural basis of Zika and Dengue virus potent antibody cross-neutralization Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BROADLY NEUTRALIZING HUMAN ANTIBODY EDE2 A11, FORMIC ACID, ... Authors: Barba-Spaeth, G. Deposit date: 2016-06-22 Release date: 2016-07-06 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.64 Å) Cite: Structural basis of potent Zika-dengue virus antibody cross-neutralization. Nature, 536, 2016
8EF3	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ119-D Descriptor: rhMZ119-D antibody heavy chain, rhMZ119-D antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (1.672 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EE8	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ100-C in complex with ZIKV E glycoprotein Descriptor: Envelope protein E, rhMZ100-C antibody heavy chain, rhMZ100-C antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-06 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (2.803 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EE5	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ119-D in complex with ZIKV E glycoprotein Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, rhMZ119-D antibody heavy chain, ... Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-06 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (3.583 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EED	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ107-B in complex with ZIKV E glycoprotein Descriptor: Envelope protein E, rhMZ107-B antibody heavy chain, rhMZ107-B antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (3.487 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EEE	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ104-d in complex with ZIKV E glycoprotein Descriptor: Envelope protein E, SULFATE ION, rhMZ104-D antibody heavy chain, ... Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (2.819 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EEZ	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ100-C Descriptor: rhMZ100-C antibody heavy chain, rhMZ100-C antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EF0	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ104-D Descriptor: PHOSPHATE ION, ZINC ION, rhMZ104-D antibody heavy chain, ... Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EF1	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ103-A Descriptor: rhMZ103-A antibody heavy chain, rhMZ103-A antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
8EF2	Crystal structure of a NHP anti-ZIKV neutralizing antibody rhMZ107-B Descriptor: PHOSPHATE ION, rhMZ107-B antibody heavy chain, rhMZ107-B antibody light chain Authors: Sankhala, R.S, Joyce, M.G. Deposit date: 2022-09-07 Release date: 2023-08-30 Method: X-RAY DIFFRACTION (2.102 Å) Cite: Zika-specific neutralizing antibodies targeting inter-dimer envelope epitopes. Cell Rep, 42, 2023
4YDV	STRUCTURE OF THE ANTIBODY 7B2 THAT CAPTURES HIV-1 VIRIONS Descriptor: HIV ANTIBODY 7B2 HEAVY CHAIN,IgG H chain, HIV ANTIBODY 7B2 LIGHT CHAIN,Ig kappa chain C region, HIV GP41 PEPTIDE GP41(596-606) Authors: Nicely, N.I, Pemble IV, C.W. Deposit date: 2015-02-23 Release date: 2015-08-12 Last modified: 2021-03-24 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus Macaques. Plos Pathog., 11, 2015
3I9G	Crystal structure of the LT1009 (SONEPCIZUMAB) antibody Fab fragment in complex with sphingosine-1-phosphate Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, CALCIUM ION, MAGNESIUM ION, ... Authors: Huxford, T. Deposit date: 2009-07-10 Release date: 2009-09-29 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The crystal structure of sphingosine-1-phosphate in complex with a Fab fragment reveals metal bridging of an antibody and its antigen. Proc.Natl.Acad.Sci.USA, 106, 2009
6I8S	Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1 Descriptor: HEAVY CHAIN OF FAB FRAGMENT FROM AN PAI-1 ANTIBODY, LIGHT CHAIN OF FAB FRAGMENT FROM AN PAI-1 ANTIBODY, Plasminogen activator inhibitor 1 Authors: Vousden, K.A, Lundqvist, T, Popovic, B. Deposit date: 2018-11-21 Release date: 2019-02-13 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1. Sci Rep, 9, 2019
1TJH	Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 11mer epitope Descriptor: 1,2-ETHANEDIOL, Envelope glycoprotein GP41, ISOPROPYL ALCOHOL, ... Authors: Ofek, G, Tang, M, Sambor, A, Katinger, H, Mascola, J.R, Wyatt, R, Kwong, P.D. Deposit date: 2004-06-04 Release date: 2004-10-05 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and mechanistic analysis of the anti-human immunodeficiency virus type 1 antibody 2F5 in complex with its gp41 epitope J.Virol., 78, 2004
7TFN	Cryo-EM structure of CD4bs antibody Ab1303 in complex with HIV-1 Env trimer BG505 SOSIP.664 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-HIV-1 CD4bs antibody Fab Ab1303 - Heavy chain, ... Authors: Yang, Z, Bjorkman, P.J. Deposit date: 2022-01-06 Release date: 2022-01-19 Last modified: 2022-02-23 Method: ELECTRON MICROSCOPY (4 Å) Cite: Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer. Nat Commun, 13, 2022
7TFO	Cryo-EM structure of HIV-1 Env trimer BG505 SOSIP.664 in complex with CD4bs antibody Ab1573 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD4 binding site antibody Ab1573 - Fab heavy chain, ... Authors: Yang, Z, Bjorkman, P.J. Deposit date: 2022-01-06 Release date: 2022-01-26 Last modified: 2022-02-23 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer. Nat Commun, 13, 2022
3AAZ	Crystal structure of the humanized recombinant Fab fragment of a murine; antibody Descriptor: Humanized recombinant Fab fragment of a murine; antibody Authors: Streltsov, V.A. Deposit date: 2009-11-28 Release date: 2010-03-02 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Germline humanization of a murine Abeta antibody and crystal structure of the humanized recombinant Fab fragment. Protein Sci., 19, 2010
5T5F	Neisseria meningitidis factor H binding protein in complex with monoclonal antibody JAR5 Descriptor: Factor H binding protein variant B24, Monoclonal antibody Jar5 heavy chain, Monoclonal antibody Jar5 light chain Authors: Malito, E. Deposit date: 2016-08-30 Release date: 2016-11-09 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.98 Å) Cite: Neisseria meningitidis factor H-binding protein bound to monoclonal antibody JAR5: implications for antibody synergy. Biochem. J., 473, 2016
7YRF	Cryo-EM structure of compact CA16 empty particle in complex with a neutralizing antibody 8C4 Descriptor: Capsid protein VP3, Genome polyprotein, Light chain of chain, ... Authors: Cong, Y, Liu, C.X. Deposit date: 2022-08-09 Release date: 2022-09-14 Last modified: 2023-01-11 Method: ELECTRON MICROSCOPY (2.91 Å) Cite: Molecular mechanism of antibody neutralization of coxsackievirus A16. Nat Commun, 13, 2022
3MNV	Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment Descriptor: 1,2-ETHANEDIOL, ANTI-HIV-1 ANTIBODY 13H11 HEAVY CHAIN, ANTI-HIV-1 ANTIBODY 13H11 LIGHT CHAIN, ... Authors: Nicely, N.I, Dennison, S.M, Kelsoe, G, Liao, H.-X, Alam, S.M, Haynes, B.F. Deposit date: 2010-04-22 Release date: 2010-11-17 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of a non-neutralizing antibody to the HIV-1 gp41 membrane-proximal external region. Nat.Struct.Mol.Biol., 17, 2010

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