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3WI3
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BU of 3wi3 by Molmil
Crystal Structure of the Sld3/Treslin domain from yeast Sld3
Descriptor: 1,2-ETHANEDIOL, DNA replication regulator SLD3, SULFATE ION
Authors:Itou, H, Araki, H, Shirakihara, Y.
Deposit date:2013-09-05
Release date:2014-08-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the homology domain of the eukaryotic DNA replication proteins sld3/treslin.
Structure, 22, 2014
4O8Y
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BU of 4o8y by Molmil
Zinc-free Rpn11 in complex with Rpn8
Descriptor: 1,2-ETHANEDIOL, 26S proteasome regulatory subunit RPN11, 26S proteasome regulatory subunit RPN8
Authors:Worden, E.J, Padovani, C, Martin, A.
Deposit date:2013-12-30
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the Rpn11-Rpn8 dimer reveals mechanisms of substrate deubiquitination during proteasomal degradation.
Nat.Struct.Mol.Biol., 21, 2014
4GFT
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BU of 4gft by Molmil
Malaria invasion machinery protein-Nanobody complex
Descriptor: 1,2-ETHANEDIOL, Myosin A tail domain interacting protein, Nanobody
Authors:Khamrui, S, Turley, S, Pardon, E, Steyaert, J, Verlinde, C, Fan, E, Bergman, L.W, Hol, W.G.J.
Deposit date:2012-08-03
Release date:2013-07-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of the D3 domain of Plasmodium falciparum myosin tail interacting protein MTIP in complex with a nanobody.
Mol.Biochem.Parasitol., 190, 2013
3O12
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BU of 3o12 by Molmil
The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uncharacterized protein YJL217W
Authors:Zhang, R, Tan, K, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-20
Release date:2010-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
TO BE PUBLISHED
4OO0
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BU of 4oo0 by Molmil
Crystal Structure of Maf-like protein BceJ2315_23540 from Burkholderia cenocepacia
Descriptor: 1,2-ETHANEDIOL, Maf-like protein BCAL2394, PHOSPHATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-01-29
Release date:2014-02-12
Last modified:2025-10-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of Maf-like protein BceJ2315_23540 from Burkholderia cenocepacia
TO BE PUBLISHED
1YSL
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BU of 1ysl by Molmil
Crystal structure of HMG-CoA synthase from Enterococcus faecalis with AcetoAcetyl-CoA ligand.
Descriptor: ACETOACETIC ACID, COENZYME A, GLYCEROL, ...
Authors:Steussy, C.N, Vartia, A.A, Burgner II, J.W, Sutherlin, A, Rodwell, V.W, Stauffacher, C.V.
Deposit date:2005-02-08
Release date:2005-11-08
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray Crystal Structures of HMG-CoA Synthase from Enterococcus faecalis and a Complex with Its Second Substrate/Inhibitor Acetoacetyl-CoA.
Biochemistry, 44, 2005
4GG7
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BU of 4gg7 by Molmil
Crystal structure of cMET in complex with novel inhibitor
Descriptor: Hepatocyte growth factor receptor, N-(3-nitrobenzyl)-6-[1-(piperidin-4-yl)-1H-pyrazol-4-yl]-2-(trifluoromethyl)pyrido[2,3-d]pyrimidin-4-amine
Authors:Liu, Q.F, Chen, T.T, Xu, Y.C.
Deposit date:2012-08-06
Release date:2012-10-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Multisubstituted quinoxalines and pyrido[2,3-d]pyrimidines: Synthesis and SAR study as tyrosine kinase c-Met inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
6MDX
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BU of 6mdx by Molmil
Mechanism of protease dependent DPC repair
Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, DNA (5'-D(P*CP*C)-3'), ...
Authors:Li, F, Raczynska, J, Chen, Z, Yu, H.
Deposit date:2018-09-05
Release date:2019-04-10
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight into DNA-Dependent Activation of Human Metalloprotease Spartan.
Cell Rep, 26, 2019
3O8U
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BU of 3o8u by Molmil
Conformational plasticity of p38 MAP kinase DFG motif mutants in response to inhibitor binding
Descriptor: 1-(5-TERT-BUTYL-2-METHYL-2H-PYRAZOL-3-YL)-3-(4-CHLORO-PHENYL)-UREA, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Namboodiri, H.V, Karpusas, M, Bukhtiyarova, M, Springman, E.B.
Deposit date:2010-08-03
Release date:2010-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational plasticity of p38 MAP kinase DFG motif mutants in response to inhibitor binding
To be Published
6M77
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BU of 6m77 by Molmil
GH31 alpha-N-acetylgalactosaminidase from Enterococcus faecalis in complex with N-acetylgalactosamine
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
Authors:Miyazaki, T.
Deposit date:2020-03-17
Release date:2020-05-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the Enterococcus faecalis alpha-N-acetylgalactosaminidase, a member of the glycoside hydrolase family 31.
Febs Lett., 594, 2020
4GB7
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BU of 4gb7 by Molmil
Putative 6-aminohexanoate-dimer hydrolase from Bacillus anthracis
Descriptor: 1,2-ETHANEDIOL, 6-aminohexanoate-dimer hydrolase, NITRATE ION
Authors:Osipiuk, J, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-07-26
Release date:2012-08-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Putative 6-aminohexanoate-dimer hydrolase from Bacillus anthracis.
To be Published
1XXZ
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BU of 1xxz by Molmil
Solution structure of sst1-selective somatostatin (SRIF) analog
Descriptor: SST1-selective somatosatin (analog 5)
Authors:Grace, C.R.R, Durrer, L, Koerber, S.C, Erchegyi, J, Reubi, J.C, Rivier, J.E, Riek, R.
Deposit date:2004-11-09
Release date:2005-02-15
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Somatostatin receptor 1 selective analogues: 4. Three-dimensional consensus structure by NMR
J.Med.Chem., 48, 2005
1XSV
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BU of 1xsv by Molmil
X-ray crystal structure of conserved hypothetical UPF0122 protein SAV1236 from Staphylococcus aureus subsp. aureus Mu50
Descriptor: Hypothetical UPF0122 protein SAV1236
Authors:Walker, J.R, Xu, X, Virag, C, McDonald, M.-L, Houston, S, Buzadzija, K, Vedadi, M, Dharamsi, A, Fiebig, K.M, Savchenko, A.
Deposit date:2004-10-20
Release date:2004-10-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:1.7 Angstrom Crystal Structure of Conserved Hypothetical UPF0122 Protein SAV1236 From Staphylococcus aureus
To be Published
2N76
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BU of 2n76 by Molmil
Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414
Descriptor: De novo designed protein LFR1
Authors:Liu, G, Lin, Y, Koga, N, Koga, R, Xiao, R, Janjua, H, Pederson, K, Acton, T.B, Kornhaber, G, Everett, J.K, Baker, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2015-09-03
Release date:2016-01-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Structure of De novo designed protein LFR1 1 with ferredoxin fold, Northeast Structural Genomics Consortium (NESG) Target OR414
To be Published
9OG5
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BU of 9og5 by Molmil
SARS-COV-2-6P-MUT7 S PROTEIN-DY-III-281 complex 1 RBD up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Chandravanshi, M, Niu, L, Tolbert, W.D, Pazgier, M.
Deposit date:2025-04-30
Release date:2025-10-01
Last modified:2025-10-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Optimization of VE607 to generate analogs with improved neutralization activities against SARS-CoV-2 variants.
J.Virol., 2025
4PMY
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BU of 4pmy by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose
Descriptor: CALCIUM ION, GLYCEROL, Xylanase, ...
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
1LSU
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BU of 1lsu by Molmil
KTN Bsu222 Crystal Structure in Complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Conserved hypothetical protein yuaA
Authors:Roosild, T.P, Miller, S, Booth, I.R, Choe, S.
Deposit date:2002-05-18
Release date:2002-07-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:A mechanism of regulating transmembrane potassium flux through a ligand-mediated conformational switch.
Cell(Cambridge,Mass.), 109, 2002
8QHR
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BU of 8qhr by Molmil
Crystal structure of the human DNPH1 glycosyl-enzyme intermediate
Descriptor: 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE, 1,2-ETHANEDIOL, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, ...
Authors:Rzechorzek, N.J, West, S.C.
Deposit date:2023-09-09
Release date:2023-11-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of substrate hydrolysis by the human nucleotide pool sanitiser DNPH1.
Nat Commun, 14, 2023
6S41
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BU of 6s41 by Molmil
CRYSTAL STRUCTURE OF PXR IN COMPLEX WITH XPC-7455
Descriptor: 4-[[(1~{S})-1-[2,5-bis(fluoranyl)phenyl]ethyl]amino]-5-chloranyl-2-fluoranyl-~{N}-(1,3-thiazol-4-yl)benzenesulfonamide, Nuclear receptor subfamily 1 group I member 2
Authors:Focken, T, Maskos, K, Griessner, A, Krapp, S.
Deposit date:2019-06-26
Release date:2019-10-02
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Identification of CNS-Penetrant Aryl Sulfonamides as Isoform-Selective NaV1.6 Inhibitors with Efficacy in Mouse Models of Epilepsy.
J.Med.Chem., 62, 2019
9BFP
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BU of 9bfp by Molmil
Cryo-EM structure of Sevenless extracellular domain (monomer)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Protein sevenless
Authors:Cerutti, G, Shapiro, L.
Deposit date:2024-04-18
Release date:2025-01-29
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Structures and pH-dependent dimerization of the sevenless receptor tyrosine kinase.
Mol.Cell, 84, 2024
6PNP
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BU of 6pnp by Molmil
Crystal structure of the splice insert-free neurexin-1 LNS2 domain in complex with neurexophilin-1
Descriptor: Neurexin-1, Neurexophilin-1
Authors:Wilson, S.C, White, K.I, Zhou, Q, Brunger, A.T.
Deposit date:2019-07-02
Release date:2019-10-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structures of neurexophilin-neurexin complexes reveal a regulatory mechanism of alternative splicing.
Embo J., 38, 2019
3KC6
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BU of 3kc6 by Molmil
Crystal structure of the large c-terminal domain of polymerase basic protein 2 from influenza virus a/viet nam/1203/2004 (h5n1)
Descriptor: 1,2-ETHANEDIOL, Polymerase PB2
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-10-20
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Biological and structural characterization of a host-adapting amino acid in influenza virus.
Plos Pathog., 6, 2010
7PEM
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BU of 7pem by Molmil
Cryo-EM structure of phophorylated Drs2p-Cdc50p in a PS and ATP-bound E2P state
Descriptor: (2R)-1-{[(R)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,5,6-tetrahydroxy-4-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Timcenko, M, Wang, Y, Lyons, J.A, Nissen, P, Lindorff-Larsen, K.
Deposit date:2021-08-10
Release date:2022-08-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Substrate Transport and Specificity in a Phospholipid Flippase
To Be Published
1HU5
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BU of 1hu5 by Molmil
SOLUTION STRUCTURE OF OVISPIRIN-1
Descriptor: OVISPIRIN-1
Authors:Sawai, M.V, Waring, A.J, Kearney, W.R, McCray Jr, P.B, Forsyth, W.R, Lehrer, R.I, Tack, B.F.
Deposit date:2001-01-04
Release date:2002-04-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Impact of single-residue mutations on the structure and function of ovispirin/novispirin antimicrobial peptides.
Protein Eng., 15, 2002
9QEG
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BU of 9qeg by Molmil
Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
Descriptor: (3aS,4R,7S,9R,10R,11R,13R,15R,15aR)-1-{4-[4-(3-aminophenyl)-1H-1,2,3-triazol-1-yl]butyl}-4-ethyl-7-fluoro-11-methoxy-3a ,7,9,11,13,15-hexamethyl-2,6,8,14-tetraoxotetradecahydro-2H-oxacyclotetradecino[4,3-d][1,3]oxazol-10-yl 3,4,6-trideoxy-3-(dimethylamino)-beta-D-xylo-hexopyranoside, 16S ribosomal RNA, 23S ribosomal RNA, ...
Authors:Rivalta, A, Yonath, A.
Deposit date:2025-03-10
Release date:2025-06-04
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.21 Å)
Cite:Structural studies on ribosomes of differentially macrolide-resistant Staphylococcus aureus strains.
Life Sci Alliance, 8, 2025

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