PDB: 222415 resultsInfo pagesStatus searchChemie searchBIRD

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9BBI	Co-crystal structure of human DDB1 bound to fragment UB028669 Descriptor: 3-([1,3]oxazolo[4,5-b]pyridin-2-yl)aniline, DNA damage-binding protein 1, L(+)-TARTARIC ACID, ... Authors: Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) Deposit date: 2024-04-05 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Co-crystal structure of human DDB1 bound to fragment UB028669 To be published
2FS6	Crystal Structure of Apo-Cellular Retinoic Acid Binding Protein Type II At 1.35 Angstroms Resolution Descriptor: ACETATE ION, CHLORIDE ION, Cellular retinoic acid-binding protein 2, ... Authors: Vaezeslami, S, Geiger, J.H. Deposit date: 2006-01-21 Release date: 2006-09-19 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.35 Å) Cite: The structure of Apo-wild-type cellular retinoic acid binding protein II at 1.4 A and its relationship to ligand binding and nuclear translocation. J.Mol.Biol., 363, 2006
9BB1	Backbone Modification in the GA Module of Protein PAB: Wild-type Sequence Descriptor: Peptostreptococcal albumin-binding protein Authors: Lin, Y, Horne, W.S. Deposit date: 2024-04-05 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Backbone Modification in a Protein Hydrophobic Core. Chemistry, 2024
9EP4	Structure of Integrator subcomplex INTS5/8/15 Descriptor: Integrator complex subunit 15, Integrator complex subunit 5, Integrator complex subunit 8 Authors: Razew, M, Galej, W.P. Deposit date: 2024-03-17 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis of the Integrator complex assembly and association with transcription factors. Mol.Cell, 2024
1MFL	The Structure of ERBIN PDZ domain bound to the Carboxy-terminal tail of the ErbB2 Receptor Descriptor: Erb-B2 INTERACTING PROTEIN, PHOSPHORYLATED Erb-B2 carboxyl-terminal fragment. Authors: Birrane, G, Chung, J, Ladias, J.A. Deposit date: 2002-08-12 Release date: 2003-01-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Novel mode of ligand recognition by the erbin PDZ domain J.Biol.Chem., 278, 2003
9BZB	Crystal structure of metallo-hydrolase-like_MBL-fold protein from Salmonella typhimurium LT2 Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, SULFATE ION, ... Authors: Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID) Deposit date: 2024-05-24 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of metallo-hydrolase-like_MBL-fold protein from Salmonella typhimurium LT2 To Be Published
2G80	Crystal structure of UTR4 protein (Unknown transcript 4 protein) (yel038w) from Saccharomyces cerevisiae at 2.28 A resolution Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, MAGNESIUM ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2006-03-01 Release date: 2006-03-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Crystal structure of UTR4 protein (Unknown transcript 4 protein) (yel038w) from Saccharomyces cerevisiae at 2.28 A resolution To be published
9BCZ	Chicken 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 (PLCZ1) in complex with calcium and phosphorylated threonine Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ... Authors: Edwards, M.M, Dong, A, Theo-Emegano, N, Seitova, A, Loppnau, P, Leung, R, Li, H, Ilyassov, O, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium, Structural Genomics Consortium (SGC) Deposit date: 2024-04-10 Release date: 2024-05-15 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Chicken 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 (PLCZ1) in complex with calcium and phosphorylated threonine To be published
2FSY	Bacteriophage HK97 Pepsin-treated Expansion Intermediate IV Descriptor: major capsid protein Authors: Gan, L, Speir, J.A, Conway, J.F, Lander, G, Cheng, N, Firek, B.A, Hendrix, R.W, Duda, R.L, Liljas, L, Johnson, J.E. Deposit date: 2006-01-23 Release date: 2006-02-07 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Capsid Conformational Sampling in HK97 Maturation Visualized by X-Ray Crystallography and Cryo-EM. Structure, 14, 2006
1MFT	Crystal Structure Of Four-Helix Bundle Model Descriptor: Four-helix bundle model, ZINC ION Authors: Lahr, S.J, Stayrook, S.E, North, B, Kaplan, J, Geremia, S, DeGrado, W. Deposit date: 2002-08-13 Release date: 2004-01-20 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Analysis and Design of Turns in alpha-Helical Hairpins J.Mol.Biol., 346, 2005
2G8J	Calpain 1 proteolytic core in complex with SNJ-1945, a alpha-ketoamide-type inhibitor. Descriptor: ((1S)-1-((((1S)-1-BENZYL-3-(CYCLOPROPYLAMINO)-2,3-DIOXOPROPYL)AMINO)CARBONYL)-3-METHYLBUTYL)CARBAMIC ACID 5-METHOXY-3-OXAPENTYL ESTER, CALCIUM ION, Calpain-1 catalytic subunit Authors: Cuerrier, D, Moldoveanu, T, Davies, P.L, Campbell, R.L. Deposit date: 2006-03-02 Release date: 2006-06-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.61 Å) Cite: Calpain Inhibition by alpha-Ketoamide and Cyclic Hemiacetal Inhibitors Revealed by X-ray Crystallography Biochemistry, 45, 2006
9EQK	WWP1 WW2-2,3-linker-WW3-WW4-HECT (WWP1-2L34H) with ordered WW2 domain Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP1 Authors: Dudey, A.P, Hemmings, A.M. Deposit date: 2024-03-21 Release date: 2024-05-15 Method: X-RAY DIFFRACTION (3 Å) Cite: Expanding the Inhibitor Space of the WWP1 and WWP2 HECT E3 Ligases To Be Published
9EY3	The FK1 domain of FKBP51 in complex with (3S,11S,11aS)-12-((3,5-dichlorophenyl)sulfonyl)-5-oxo-11-vinyldecahydro-1H-6,10-epiminopyrrolo[1,2-a]azonine-3-carboxylic acid Descriptor: (1~{S},4~{S},7~{S},8~{S},9~{R})-13-[3,5-bis(chloranyl)phenyl]sulfonyl-8-ethenyl-2-oxidanylidene-3,13-diazatricyclo[7.3.1.0^{3,7}]tridecane-4-carboxylic acid, Peptidyl-prolyl cis-trans isomerase FKBP5 Authors: Meyners, C, Krajczy, P, Hausch, F. Deposit date: 2024-04-09 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.16 Å) Cite: Structure-Based Design of Ultrapotent Tricyclic Ligands for FK506-Binding proteins. Chemistry, 2024
9FA4	Structure of the Integrator arm module containing subunits INTS10/13/14/15 (state 1) Descriptor: Integrator complex subunit 10, Integrator complex subunit 13, Integrator complex subunit 14, ... Authors: Razew, M, Galej, W.P. Deposit date: 2024-05-10 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structural basis of the Integrator complex assembly and association with transcription factors. Mol.Cell, 2024
8Y95	Structure of NET-NE in Occluded state Descriptor: CHLORIDE ION, Noradrenaline, SODIUM ION, ... Authors: Zhang, H, Xu, H.E, Jiang, Y. Deposit date: 2024-02-06 Release date: 2024-05-29 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Dimerization and antidepressant recognition at noradrenaline transporter. Nature, 630, 2024
9BRT	Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles Descriptor: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ... Authors: Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T. Deposit date: 2024-05-11 Release date: 2024-06-19 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature, 2024
9BOL	Crystal structure of the complex between VHL, ElonginB, ElonginC, and compound 5 Descriptor: (4R)-1-[(2S)-2-(4-cyclopropyl-1H-1,2,3-triazol-1-yl)-3,3-dimethylbutanoyl]-4-hydroxy-N-{[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl}-L-prolinamide, 1,2-ETHANEDIOL, CHLORIDE ION, ... Authors: Murray, J.M, Wu, H, Fuhrmann, J, Fairbrother, W.J, DiPasquale, A. Deposit date: 2024-05-03 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Potency-enhanced peptidomimetic VHL ligands with improved oral bioavailability To Be Published
9BVS	NMR structure of TLP-1 in solution Descriptor: Temporin-1Tl Authors: Jia, R, McShan, A.C. Deposit date: 2024-05-20 Release date: 2024-06-05 Method: SOLUTION NMR Cite: Design and Development of Temporin L Analogues to Inhibit the Main Protease of SARS-CoV-2 To Be Published
9EOU	Crystal Structure of the b1b2 domains from Human Neuropilin-1 in complex with a peptide. Descriptor: Neuropilin-1, Osteopontin Authors: Caing-Carlsson, R, Duelli, A, Walse, B. Deposit date: 2024-03-15 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Identification of an osteopontin-derived peptide that binds neuropilin-1 and activates vascular repair responses and angiogenesis. Pharmacol Res, 205, 2024
9C8S	CryoEM structure of Cryptococcus neoformans H99 Acetyl-CoA Synthetase in complex with adenosine-5'-ethylphosphate Descriptor: 5'-O-[(S)-ethoxy(hydroxy)phosphoryl]adenosine, Acetyl-coenzyme A synthetase Authors: Xu, Z, Schnicker, N.J, Jezeski, A.J, Krysan, D.J. Deposit date: 2024-06-12 Release date: 2024-07-03 Method: ELECTRON MICROSCOPY (2.37 Å) Cite: CryoEM structure of Cryptococcus neoformans H99 Acetyl-CoA Synthetase in complex with adenosine-5'-ethylphosphate To Be Published
7LYV	Crystal structure of the HCMV pentamer-specific antibody 1-103 Descriptor: 1-103 Fab Heavy Chain, 1-103 Fab Light Chain Authors: Wrapp, D, Jones, H.G, McLellan, J.S. Deposit date: 2021-03-08 Release date: 2021-08-11 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for HCMV Pentamer recognition by neuropilin 2 and neutralizing antibodies. Sci Adv, 8, 2022
9BRB	Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1 Descriptor: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ... Authors: Coupland, C.E, Rubinstein, J.L. Deposit date: 2024-05-11 Release date: 2024-06-26 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles. Science, 2024
9FEF	Cryo-EM structure of Trypanosoma cruzi (MDH)4-PEX5 complex Descriptor: Peroxisome targeting signal 1 receptor, malate dehydrogenase Authors: Lipinski, O, Sonani, R.R, Blat, A, Jemiola-Rzeminska, M, Patel, S.N, Sood, T, Dubin, G. Deposit date: 2024-05-19 Release date: 2024-05-29 Method: ELECTRON MICROSCOPY (2.98 Å) Cite: Cryo-EM structure of Trypanosoma cruzi (MDH)4-PEX5 complex To Be Published
9BZN	High resolution structure of class A Beta-lactamase from Bordetella bronchiseptica RB50 Descriptor: FORMIC ACID, SULFATE ION, class A Beta-lactamase, ... Authors: Maltseva, N, Kim, Y, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases (CSBID) Deposit date: 2024-05-24 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.05 Å) Cite: High resolution structure of class A Beta-lactamase from Bordetella bronchiseptica RB50 To Be Published
9B55	Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 1 Descriptor: 4-aminobutanenitrile, E3 ubiquitin-protein ligase pub2, Ubiquitin, ... Authors: Kochanczyk, T, Lima, C.D. Deposit date: 2024-03-22 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (3.23 Å) Cite: Structural basis for transthiolation intermediates in the ubiquitin pathway To be published

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