Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9FWC
DownloadVisualize
BU of 9fwc by Molmil
Coxsackievirus B3 3C protease in C121 spacegroup
分子名称: Genome polyprotein
著者Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
登録日2024-06-28
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Coxsackievirus B3 3C protease in C121 spacegroup
To Be Published
8XVX
DownloadVisualize
BU of 8xvx by Molmil
Cryo-EM structure of OSCA1.2-DOPC-1:20-expanded state
分子名称: Calcium permeable stress-gated cation channel 1
著者Zhang, Y, Han, Y.
登録日2024-01-15
公開日2024-04-10
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Mechanical activation opens a lipid-lined pore in OSCA ion channels.
Nature, 628, 2024
8PC7
DownloadVisualize
BU of 8pc7 by Molmil
STRUCTURE OF ESTER-HYDROLASE EH3 FROM THE METAGENOME OF MARINE SEDIMENTS AT MILAZZO HARBOR (SICILY, ITALY) COMPLEXED WITH A DERIVATIVE OF BIPYRIDINE PHOSPHONATE
分子名称: DI(HYDROXYETHYL)ETHER, Esterase, GLYCEROL, ...
著者Cea-Rama, I, Sanz-Aparicio, J.
登録日2023-06-09
公開日2023-07-19
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Transforming an esterase into an enantioselective catecholase through bioconjugation of a versatile metal-chelating inhibitor.
Chem.Commun.(Camb.), 59, 2023
9EMA
DownloadVisualize
BU of 9ema by Molmil
RUVBL1/2 in complex with ATP and CB-6644 inhibitor
分子名称: 5-chloranyl-2-ethoxy-4-fluoranyl-~{N}-[4-[[3-(methoxymethyl)-1-oxidanylidene-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2]benzodiazepin-2-yl]amino]-2,2-dimethyl-4-oxidanylidene-butyl]benzamide, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
登録日2024-03-07
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
8ZM1
DownloadVisualize
BU of 8zm1 by Molmil
Structure of human pyruvate dehydrogenase kinase 2 complexed with compound 6
分子名称: (5~{R})-5-propan-2-ylindeno[1,2-b]pyridin-5-ol, [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial
著者Akai, S, Orita, T, Nomura, A, Adachi, T.
登録日2024-05-22
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Design and synthesis of novel fluorene derivatives as inhibitors of pyruvate dehydrogenase kinase.
Bioorg.Med.Chem.Lett., 109, 2024
8ZN4
DownloadVisualize
BU of 8zn4 by Molmil
Crystal structure of Poly(ethylene glycol) stabilized erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 2.30 A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, ...
著者Viswanathan, V, Kumari, A, Singh, A, Kumar, A, Sharma, P, Chopra, S, Sharma, S, Raje, C.I, Singh, T.P.
登録日2024-05-25
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Poly(ethylene glycol) stabilized erythrose-4-phosphate dehydrogenase from Acinetobacter baumannii at 2.30 A resolution
To Be Published
9B9R
DownloadVisualize
BU of 9b9r by Molmil
Cryo-EM structure of the ZBTB5 BTB domain filament
分子名称: Zinc finger and BTB domain-containing protein 5
著者Park, J, Hunkeler, M, Fischer, E.S.
登録日2024-04-03
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Polymerization of ZBTB transcription factors regulates chromatin occupancy.
Mol.Cell, 84, 2024
8OVX
DownloadVisualize
BU of 8ovx by Molmil
Cryo-EM structure of yeast CENP-OPQU+ bound to the CENP-A N-terminus
分子名称: Inner kinetochore subunit AME1, Inner kinetochore subunit CTF19, Inner kinetochore subunit MCM21, ...
著者Dendooven, T.D, Zhang, Z, Yang, J, McLaughlin, S, Schwabb, J, Scheres, S, Yatskevich, S.
登録日2023-04-26
公開日2023-08-09
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of the complete inner kinetochore of the budding yeast point centromere.
Sci Adv, 9, 2023
8Y6P
DownloadVisualize
BU of 8y6p by Molmil
Structure of the auto-inhibited Dark monomer
分子名称: Apaf-1 related killer DARK
著者Tian, L, Li, Y, Shi, Y.
登録日2024-02-03
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Dark and Dronc activation in Drosophila melanogaster.
Proc.Natl.Acad.Sci.USA, 121, 2024
9FWG
DownloadVisualize
BU of 9fwg by Molmil
LSD1/CoREST bound to bomedemstat
分子名称: Bomedemstat FAD adduct, Lysine-specific histone demethylase 1A, REST corepressor 1
著者Speranzini, V, Mattevi, A.
登録日2024-06-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Characterization of structural, biochemical, pharmacokinetic, and pharmacodynamic properties of the LSD1 inhibitor bomedemstat in preclinical models.
Prostate, 84, 2024
8OWN
DownloadVisualize
BU of 8own by Molmil
CryoEM structure of glutamate dehydrogenase isoform 2 from Arabidopsis thaliana in apo-form
分子名称: CALCIUM ION, Glutamate dehydrogenase 2
著者Grzechowiak, M, Ruszkowski, M.
登録日2023-04-28
公開日2023-08-09
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structural and functional studies of Arabidopsis thaliana glutamate dehydrogenase isoform 2 demonstrate enzyme dynamics and identify its calcium binding site.
Plant Physiol Biochem., 201, 2023
9BN8
DownloadVisualize
BU of 9bn8 by Molmil
Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and inhibitor A19
分子名称: GLYCEROL, N-(4-{[(4S)-3-amino[1,2,4]triazolo[4,3-b]pyridazin-6-yl]sulfanyl}phenyl)acetamide, SULFATE ION, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-05-02
公開日2024-05-15
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal Structure of UDP-N-acetylmuramoylalanine--D-glutamate ligase (MurD) from E. coli in complex with UMA and inhibitor A19
To be published
8WII
DownloadVisualize
BU of 8wii by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463A in complex with Obafluorin
分子名称: Threonine--tRNA ligase, ZINC ION, ~{N}-[(2~{R},3~{S})-2-[(4-nitrophenyl)methyl]-4-oxidanylidene-oxetan-3-yl]-2,3-bis(oxidanyl)benzamide
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
9ATH
DownloadVisualize
BU of 9ath by Molmil
Crystal structure of MERS 3CL protease in complex with a methylbicyclo[2.2.1]heptene 2-pyrrolidone inhibitor
分子名称: (1R,2S)-2-{[N-({[(2S)-1-{[(1R,2S,4R)-bicyclo[2.2.1]hept-5-en-2-yl]methyl}-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-{[N-({[(2S)-1-{[(1R,2S,4R)-bicyclo[2.2.1]hept-5-en-2-yl]methyl}-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Liu, L, Lovell, S, Battaile, K.P, Dampalla, C.S, Groutas, W.C.
登録日2024-02-26
公開日2024-07-10
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure-Guided Design of Potent Coronavirus Inhibitors with a 2-Pyrrolidone Scaffold: Biochemical, Crystallographic, and Virological Studies.
J.Med.Chem., 67, 2024
8ZND
DownloadVisualize
BU of 8znd by Molmil
Cryo-EM structure of W89F mutated Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH and a substrate in the steady stage of reaction
分子名称: Glutamate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wakabayashi, T, Nakasako, M.
登録日2024-05-26
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by crystal structure and cryoEM-sampling of metastable conformation in action
To Be Published
9F63
DownloadVisualize
BU of 9f63 by Molmil
Crystal structure of Saccharomyces cerevisiae pH nine-sensitive protein 1 (PNS1)
分子名称: Protein PNS1
著者Driller, J.H, Pedersen, B.P.
登録日2024-04-30
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献S. cerevisiae pH nine-sensitive protein 1 is not a choline transporter.
To Be Published
8OLU
DownloadVisualize
BU of 8olu by Molmil
Leishmania tarentolae proteasome 20S subunit in complex with 1-Benzyl-N-(3-(cyclopropylcarbamoyl)phenyl)-6-oxo-1,6-dihydropyridazine-3-carboxamide
分子名称: Proteasome alpha 1 subunit, putative, Proteasome alpha 5 subunit, ...
著者Rowland, P.
登録日2023-03-30
公開日2023-08-09
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Structure-Guided Design and Synthesis of a Pyridazinone Series of Trypanosoma cruzi Proteasome Inhibitors.
J.Med.Chem., 66, 2023
9ARQ
DownloadVisualize
BU of 9arq by Molmil
Crystal structure of SARS-CoV-2 main protease (authentic protein) in complex with an inhibitor TKB-245
分子名称: (1R,2S,5S)-N-{(1S,2S)-1-(4-fluoro-1,3-benzothiazol-2-yl)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Bulut, H, Hattori, S, Hayashi, H, Hasegawa, K, Li, M, Wlodawer, A, Tamamura, H, Mitsuya, H.
登録日2024-02-23
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and virologic mechanism of emergence of main protease inhibitor-resistance in SARS-CoV-2 as selected with main protease inhibitors
To Be Published
9BK3
DownloadVisualize
BU of 9bk3 by Molmil
Crystal structure of Lactate dehydrogenase in complex with 4-((4-(1-methyl-1H-imidazole-2-carbonyl)phenyl)amino)-4-oxo-2-(4-(trifluoromethyl)phenyl)butanoic acid (R-enantiomer, orthorhombic P form)
分子名称: (2R)-4-[4-(1-methyl-1H-imidazole-2-carbonyl)anilino]-4-oxo-2-[4-(trifluoromethyl)phenyl]butanoic acid, CHLORIDE ION, L-lactate dehydrogenase A chain, ...
著者Lovell, S, Cooper, A, Battaile, K.P, Sharma, H.
登録日2024-04-26
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synthesis and biological characterization of an orally bioavailable lactate dehydrogenase-A inhibitor against pancreatic cancer.
Eur.J.Med.Chem., 275, 2024
9ARD
DownloadVisualize
BU of 9ard by Molmil
Structure of Pycsar EcPycC cyclase immunoglobulin-like AGS-C domain
分子名称: Cytidylate cyclase
著者Richmond-Buccola, D, Kranzusch, P.J.
登録日2024-02-23
公開日2024-06-19
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献A large-scale type I CBASS antiphage screen identifies the phage prohead protease as a key determinant of immune activation and evasion.
Cell Host Microbe, 32, 2024
9FSE
DownloadVisualize
BU of 9fse by Molmil
Human ROR2 cysteine-rich domain (CRD) and Kringle domain
分子名称: SULFATE ION, Tyrosine-protein kinase transmembrane receptor ROR2
著者Griffiths, S.C, Tan, J, Wagner, A, Blazer, L.L, Adams, J.J, Srinivasan, S, Moghisaei, S, Sidhu, S.S, Siebold, C, Ho, H.H.
登録日2024-06-20
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structure and function of the ROR2 cysteine-rich domain in vertebrate noncanonical WNT5A signaling.
Elife, 13, 2024
8VEM
DownloadVisualize
BU of 8vem by Molmil
IsPETase - ACCE mutant
分子名称: Poly(ethylene terephthalate) hydrolase, SULFATE ION
著者Joho, Y, Royan, S, Newton, S, Caputo, A.T, Ardevol Grau, A, Jackson, C.
登録日2023-12-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.711 Å)
主引用文献Enhancing PET Degrading Enzymes: A Combinatory Approach.
Chembiochem, 25, 2024
8YU9
DownloadVisualize
BU of 8yu9 by Molmil
Tubulin-RB3-TTL in complex with compound SI10
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-(2-chloranylthieno[3,2-d]pyrimidin-4-yl)-7-methoxy-1,3-dihydroquinoxalin-2-one, CALCIUM ION, ...
著者Wu, C.Y, Wang, Y.X.
登録日2024-03-27
公開日2024-06-05
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The crystal structure of tubulin-RB3-TTL in complex with compound AB10
To Be Published
9BLG
DownloadVisualize
BU of 9blg by Molmil
Crystal structure of non-receptor protein tyrosine phosphatase SHP2 in complex with PF-07284892
分子名称: (1S)-1'-{6-[(2-amino-3-chloropyridin-4-yl)sulfanyl]-1,2,4-triazin-3-yl}-1,3-dihydrospiro[indene-2,4'-piperidin]-1-amine, Tyrosine-protein phosphatase non-receptor type 11
著者Bester, S.M, Wu, W.-I, Mou, T.-C.
登録日2024-04-30
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献SHP2 Inhibition Sensitizes Diverse Oncogene-Addicted Solid Tumors to Re-treatment with Targeted Therapy.
Cancer Discov, 13, 2023
8W2F
DownloadVisualize
BU of 8w2f by Molmil
Plasmodium falciparum 20S proteasome bound to an inhibitor
分子名称: (3S)-1-[(2-fluoroethoxy)acetyl]-N-{[(4P)-4-(6-methylpyridin-3-yl)-1,3-thiazol-2-yl]methyl}piperidine-3-carboxamide, Proteasome endopeptidase complex, Proteasome subunit alpha type, ...
著者Han, Y, Deng, X, Ray, S, Chen, Z, Phillips, M.
登録日2024-02-20
公開日2024-07-31
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Identification of potent and reversible piperidine carboxamides that are species-selective orally active proteasome inhibitors to treat malaria.
Cell Chem Biol, 2024

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon