Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YW5
DownloadVisualize
BU of 1yw5 by Molmil
Peptidyl-prolyl isomerase ESS1 from Candida albicans
分子名称: peptidyl prolyl cis/trans isomerase
著者Li, Z, Li, H, Devasahayam, G, Gemmill, T, Chaturvedi, V, Hanes, S.D, Van Roey, P.
登録日2005-02-17
公開日2005-04-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Structure of the Candida albicans Ess1 Prolyl Isomerase Reveals a Well-Ordered Linker that Restricts Domain Mobility
Biochemistry, 44, 2005
7ZVF
DownloadVisualize
BU of 7zvf by Molmil
Crystal structure of human cathepsin L in complex with covalently bound CLIK148
分子名称: (2S)-N-[(2S)-1-(dimethylamino)-1-oxidanylidene-3-phenyl-propan-2-yl]-2-oxidanyl-N'-(2-pyridin-2-ylethyl)butanediamide, 1,2-ETHANEDIOL, Cathepsin L, ...
著者Falke, S, Lieske, J, Guenther, S, Reinke, P.Y.A, Ewert, W, Loboda, J, Karnicar, K, Usenik, A, Lindic, N, Sekirnik, A, Tsuge, H, Chapman, H.N, Hinrichs, W, Turk, D, Meents, A.
登録日2022-05-15
公開日2023-11-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors.
J.Med.Chem., 67, 2024
6L48
DownloadVisualize
BU of 6l48 by Molmil
Structure of the human sterol O-acyltransferase 1 in resting state
分子名称: CHOLESTEROL, Sterol O-acyltransferase 1
著者Chen, L, Guan, C, Niu, Y.
登録日2019-10-16
公開日2020-04-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into the inhibition mechanism of human sterol O-acyltransferase 1 by a competitive inhibitor.
Nat Commun, 11, 2020
7ZVK
DownloadVisualize
BU of 7zvk by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9-fluoranyl-3,12,18-tris(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]-3~{H}-purin-6-one, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-16
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-IMP)
To Be Published
2VFA
DownloadVisualize
BU of 2vfa by Molmil
Crystal structure of a chimera of Plasmodium falciparum and human hypoxanthine-guanine phosphoribosyl transferases
分子名称: GUANOSINE-5'-MONOPHOSPHATE, HYPOXANTHINE-GUANINE-XANTHINE PHOSPHORIBOSYLTRANSFERASE, HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE, ...
著者Gayathri, P, Selvi, T.S, Subbayya, I.N.S, Ashok, C.S, Balaram, H, Murthy, M.R.N.
登録日2007-11-02
公開日2008-06-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of a Chimera of Human and Plasmodium Falciparum Hypoxanthine Guanine Phosphoribosyltransferases Provides Insights Into Oligomerization.
Proteins, 73, 2008
3ES3
DownloadVisualize
BU of 3es3 by Molmil
Directing Noble Metal Ion Chemistry within a Designed Ferritin Protein. The Complex with Gold ions. Ferritin H8-H9x Mutant
分子名称: CALCIUM ION, Ferritin heavy chain, GOLD ION
著者Di Costanzo, L, Christianson, D.W.
登録日2008-10-03
公開日2008-10-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.795 Å)
主引用文献Directing noble metal ion chemistry within a designed ferritin protein.
Biochemistry, 47, 2008
7ZXB
DownloadVisualize
BU of 7zxb by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},10~{S},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-18-fluoranyl-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-20
公開日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'dAMP-2'F,2'dAMP)
To Be Published
8A3U
DownloadVisualize
BU of 8a3u by Molmil
Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Putative Sensory box protein,Sensor protein FixL
著者Arinkin, V, Batra-Safferling, R, Granzin, J.
登録日2022-06-09
公開日2023-12-20
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of a chimeric LOV-Histidine kinase SB2F1 (symmetrical variant, trigonal form with short c-axis)
To Be Published
7ZWL
DownloadVisualize
BU of 7zwl by Molmil
Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{S},10~{R},15~{R},17~{R},18~{S})-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,11,13-tetraoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]purin-6-amine, Stimulator of interferon protein, Ubiquitin-like protein SMT3
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-19
公開日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-di-(2'F,2'dAMP)
To Be Published
4MKU
DownloadVisualize
BU of 4mku by Molmil
Frog M ferritin mutant H54Q
分子名称: CHLORIDE ION, Ferritin, middle subunit, ...
著者Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
登録日2013-09-05
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015
6L55
DownloadVisualize
BU of 6l55 by Molmil
Recombinant Tegillarca granosa ferritin
分子名称: FE (III) ION, FORMIC ACID, Ferritin, ...
著者Jiang, Q.Q, Su, X.R, Ming, T.H, Huan, H.S.
登録日2019-10-22
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.78304863 Å)
主引用文献Structural Insights Into the Effects of Interactions With Iron and Copper Ions on Ferritin From the Blood Clam Tegillarca granosa.
Front Mol Biosci, 9, 2022
7ZV0
DownloadVisualize
BU of 7zv0 by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
分子名称: 9-[(1~{R},6~{R},8~{R},9~{R},10~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanyl)-3,12-bis(oxidanylidene)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-05-13
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP-2'F,2'dAMP)
To Be Published
6XYO
DownloadVisualize
BU of 6xyo by Molmil
Multiple system atrophy Type I alpha-synuclein filament
分子名称: Alpha-synuclein
著者Schweighauser, M, Shi, Y, Tarutani, A, Kametani, F, Murzin, A.G, Ghetti, B, Matsubara, T, Tomita, T, Ando, T, Hasegawa, K, Murayama, S, Yoshida, M, Hasegawa, M, Scheres, S.H.W, Goedert, M.
登録日2020-01-30
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structures of alpha-synuclein filaments from multiple system atrophy.
Nature, 585, 2020
8A2X
DownloadVisualize
BU of 8a2x by Molmil
Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
分子名称: 9-[(1~{R},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{S})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-17-yl]purin-6-amine, Stimulator of interferon protein
著者Klima, M, Smola, M, Boura, E.
登録日2022-06-06
公開日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human STING in complex with 3',3'-c-(2'F,2'dAMP(S)-2'F,2'dAMP(S))
To Be Published
4MN9
DownloadVisualize
BU of 4mn9 by Molmil
Fifteen minutes iron loaded frog M ferritin mutant H54Q
分子名称: CHLORIDE ION, FE (III) ION, Ferritin, ...
著者Mangani, S, Di Pisa, F, Pozzi, C, Turano, P, Lalli, D.
登録日2013-09-10
公開日2014-10-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Time-lapse anomalous X-ray diffraction shows how Fe(2+) substrate ions move through ferritin protein nanocages to oxidoreductase sites.
Acta Crystallogr.,Sect.D, 71, 2015
2DDC
DownloadVisualize
BU of 2ddc by Molmil
Unique behavior of a histidine responsible for an engineered green-to-red photoconversion process
分子名称: MAGNESIUM ION, SODIUM ION, photoconvertible fluorescent protein
著者Shimizu, H, Tsutsui, H, Nukina, N, Miyawaki, A.
登録日2006-01-27
公開日2006-03-07
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The E1 mechanism in photo-induced beta-elimination reactions for green-to-red conversion of fluorescent proteins.
Chem.Biol., 16, 2009
3EMP
DownloadVisualize
BU of 3emp by Molmil
Crystal Structure of the S-acetanilide modified form of C165S AhpC
分子名称: Alkyl hydroperoxide reductase subunit C
著者Karplus, P.A, Hall, A.
登録日2008-09-24
公開日2009-03-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Cysteine pK(a) Values for the Bacterial Peroxiredoxin AhpC
Biochemistry, 47, 2008
4HWA
DownloadVisualize
BU of 4hwa by Molmil
Crystal Structure of Escherichia coli MscS Wildtype (Open State)
分子名称: Small-conductance mechanosensitive channel
著者Lai, J.Y, Poon, Y.S, Kaiser, J, Rees, D.C.
登録日2012-11-07
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.37 Å)
主引用文献Open and shut: crystal structures of the dodecylmaltoside solubilized mechanosensitive channel of small conductance from Escherichia coli and Helicobacter pylori at 4.4 A and 4.1 A resolutions.
Protein Sci., 22, 2013
8APY
DownloadVisualize
BU of 8apy by Molmil
Crystal structure of the H12A variant of the KDEL receptor bound to sybody
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ER lumen protein-retaining receptor 2, Synthetic nanobody
著者Parker, J.L, Smith, K, Newstead, S.
登録日2022-08-10
公開日2023-08-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Molecular basis for pH sensing in the KDEL trafficking receptor.
Structure, 32, 2024
4HX7
DownloadVisualize
BU of 4hx7 by Molmil
Structure of MNTR E11K mutant complexed with Cd2+
分子名称: CADMIUM ION, Transcriptional regulator MntR
著者Glasfeld, A, Cuthbert, B.J.
登録日2012-11-09
公開日2012-11-21
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Roles of the A and C Sites in the Manganese-Specific Activation of MntR.
Biochemistry, 52, 2013
4MJB
DownloadVisualize
BU of 4mjb by Molmil
Synechocystis sp. PCC 6803 glutaredoxin A-A79S
分子名称: Probable glutaredoxin ssr2061, SULFATE ION
著者Sutton, R.B, Knaff, D.B.
登録日2013-09-03
公開日2013-12-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.111 Å)
主引用文献Utility of Synechocystis sp. PCC 6803 glutaredoxin A as a platform to study high-resolution mutagenesis of proteins.
Front Plant Sci, 4, 2013
8A5Y
DownloadVisualize
BU of 8a5y by Molmil
S. cerevisiae apo unphosphorylated APC/C.
分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 11, Anaphase-promoting complex subunit 2, ...
著者Barford, D, Fernandez-Vazquez, E, Zhang, Z, Yang, J.
登録日2022-06-16
公開日2022-08-31
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Cryo-EM structure of the S. cerevisiae APC/C-Cdh1 complex and comparison to apo unphosphorylated and phosphorylated states
To Be Published
2V6G
DownloadVisualize
BU of 2v6g by Molmil
Structure of Progesterone 5beta-Reductase from Digitalis Lanata in complex with NADP
分子名称: CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROGESTERONE 5-BETA-REDUCTASE, ...
著者Thorn, A, Egerer-Sieber, C, Jaeger, C, Herl, V, Mueller-Uri, F, Kreis, W, Muller, Y.A.
登録日2007-07-18
公開日2007-11-20
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Crystal Structure of Progesterone 5{Beta}-Reductase from Digitalis Lanata Defines a Novel Class of Short Chain Dehydrogenases/Reductases.
J.Biol.Chem., 283, 2008
3NW9
DownloadVisualize
BU of 3nw9 by Molmil
Rat COMT in complex with a methylpurin-containing bisubstrate inhibitor
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Catechol O-methyltransferase, ...
著者Ehler, A, Schlatter, D, Stihle, M, Benz, J, Rudolph, M.G.
登録日2010-07-09
公開日2011-03-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Molecular Recognition at the Active Site of Catechol-O-methyltransferase (COMT): Adenine Replacements in Bisubstrate Inhibitors
Chemistry, 17, 2011
8ACS
DownloadVisualize
BU of 8acs by Molmil
Crystal structure of FMO from Janthinobacterium svalbardensis
分子名称: DI(HYDROXYETHYL)ETHER, FAD-dependent oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Polidori, N, Galuska, P, Gruber, K.
登録日2022-07-06
公開日2022-09-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A Cold-Active Flavin-Dependent Monooxygenase from Janthinobacterium svalbardensis Unlocks Applications of Baeyer-Villiger Monooxygenases at Low Temperature.
Acs Catalysis, 13, 2023

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon