PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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6ZRN	Crystal structure of the RLIP76 Ral binding domain mutant (E427S/L429M/Q433L/K440R) in complex with RalB-GMPPNP 分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... 著者 Hurd, C, Brear, P, Revell, J, Ross, S, Mott, H, Owen, D. 登録日 2020-07-13 公開日 2020-11-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.482 Å) 主引用文献 Affinity maturation of the RLIP76 Ral binding domain to inform the design of stapled peptides targeting the Ral GTPases. J.Biol.Chem., 296, 2020
4KZY	Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A. 分子名称: 18S Ribosomal RNA, 40S Ribosomal Protein RACK1, 40S Ribosomal Protein S10, ... 著者 Lomakin, I.B, Steitz, T.A. 登録日 2013-05-30 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (7.01 Å) 主引用文献 The initiation of mammalian protein synthesis and mRNA scanning mechanism. Nature, 500, 2013
4L6E	Crystal Structure of the RanBD1 fourth domain of E3 SUMO-protein ligase RanBP2. Northeast Structural Genomics Consortium (NESG) Target HR9193b 分子名称: E3 SUMO-protein ligase RanBP2 著者 Vorobiev, S, Su, M, Seetharaman, J, Mao, L, Xiao, R, Maglaqui, M, Kogan, S, Wang, H, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2013-06-12 公開日 2013-06-26 実験手法 X-RAY DIFFRACTION (2.496 Å) 主引用文献 Crystal Structure of the RanBD1 fourth domain of E3 SUMO-protein ligase RanBP2. To be Published
4EDR	The structure of the S. aureus DnaG RNA Polymerase Domain bound to UTP and Manganese 分子名称: BENZAMIDINE, DNA primase, MANGANESE (II) ION, ... 著者 Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M. 登録日 2012-03-27 公開日 2012-07-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases. Structure, 20, 2012
4EKB	Initial Thaumatin Structure for Radiation Damage Experiment at 100 K 分子名称: L(+)-TARTARIC ACID, Thaumatin-1 著者 Warkentin, M, Badeau, R, Hopkins, J.B, Thorne, R.E. 登録日 2012-04-09 公開日 2012-08-29 最終更新日 2013-01-23 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Spatial distribution of radiation damage to crystalline proteins at 25-300 K. Acta Crystallogr.,Sect.D, 68, 2012
4EPU	Ang1 fibrinogen-related domain (FReD) 分子名称: Angiopoietin-1, CALCIUM ION 著者 Yeykal, C.C, Adams, E.J. 登録日 2012-04-17 公開日 2013-04-17 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.098 Å) 主引用文献 Biochemical and structural characterization of the Ang1 fibrinogen-related domain To be Published
4ETY	Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 (NYSGRC-006047) Extra Cellular Domain 分子名称: 1,2-ETHANEDIOL, Leukocyte-associated immunoglobulin-like receptor 1 著者 Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN) 登録日 2012-04-24 公開日 2012-06-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a strand-swapped dimer of Mouse Leukocyte-associated immunoglobulin-like receptor 1 Extra Cellular Domain to be published
4LD5	Crystal structure of MepR Q18P mutant from multidrug resistant S. aureus clinical isolate 分子名称: MepR, SULFATE ION 著者 Birukou, I, Brennan, R.G. 登録日 2013-06-24 公開日 2013-09-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus. MBio, 4, 2013
4L0C	Crystal structure of the N-Fopmylmaleamic acid deformylase Nfo(S94A) from Pseudomonas putida S16 分子名称: ACETIC ACID, DI(HYDROXYETHYL)ETHER, Deformylase 著者 Chen, D, Lu, Y, Zhang, Z, Wu, G, Xu, P. 登録日 2013-05-31 公開日 2014-06-04 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of the N-Fopmylmaleamic acid deformylase Nfo from Pseudomonas putida S16 To be Published
4EVD	Crystal Structure HP-NAP from strain YS29 cadmium loaded (Cocrystallization 50mM) 分子名称: CADMIUM ION, Neutrophil-activating protein 著者 Yokoyama, H, Tsuruta, O, Akao, N, Fujii, S. 登録日 2012-04-26 公開日 2012-06-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of Helicobacter pylori neutrophil-activating protein with a di-nuclear ferroxidase center in a zinc or cadmium-bound form Biochem.Biophys.Res.Commun., 422, 2012
4L25	Crystal structure of DNA duplex containing consecutive T-T mispairs 分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*TP*TP*TP*CP*GP*CP*G)-3') 著者 Kondo, J, Yamada, T, Hirose, C, Tanaka, Y, Ono, A. 登録日 2013-06-04 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal Structure of Metallo DNA Duplex Containing Consecutive Watson-Crick-like T-Hg(II) -T Base Pairs Angew.Chem.Int.Ed.Engl., 53, 2014
4EW3	The structure of human glycinamide ribonucleotide transformylase in complex with 10R-methylthio-DDATHF. 分子名称: N-({4-[(1R)-4-(2,4-diamino-6-oxo-1,6-dihydropyrimidin-5-yl)-1-(methylsulfanyl)butyl]phenyl}carbonyl)-L-glutamic acid, PHOSPHATE ION, SULFATE ION, ... 著者 Connelly, S, DeMartino, K, Boger, D.L, Wilson, I.A. 登録日 2012-04-26 公開日 2013-07-31 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.702 Å) 主引用文献 Biological and Structural Evaluation of 10R- and 10S-Methylthio-DDACTHF Reveals a New Role for Sulfur in Inhibition of Glycinamide Ribonucleotide Transformylase. Biochemistry, 52, 2013
4L5U	The structural implications of the secondary CO2 binding pocket in human carbonic anhydrase II 分子名称: Carbonic anhydrase 2, GLYCEROL, ZINC ION 著者 Boone, C.D, Gill, S, McKenna, R. 登録日 2013-06-11 公開日 2014-04-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural, catalytic and stabilizing consequences of aromatic cluster variants in human carbonic anhydrase II. Arch.Biochem.Biophys., 539, 2013
4JV5	Crystal structures of pseudouridinilated stop codons with ASLs 分子名称: 16S ribosomal RNA, 30S ribosomal protein 20, 30S ribosomal protein S10, ... 著者 Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V. 登録日 2013-03-25 公開日 2013-06-26 最終更新日 2013-08-21 実験手法 X-RAY DIFFRACTION (3.162 Å) 主引用文献 Unusual base pairing during the decoding of a stop codon by the ribosome. Nature, 500, 2013
4EUE	Crystal structure of Clostridium acetobutulicum trans-2-enoyl-CoA reductase in complex with NADH 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Putative reductase CA_C0462, SODIUM ION 著者 Hu, K, Zhao, M, Zhang, T, Yang, S, Ding, J. 登録日 2012-04-25 公開日 2012-11-28 最終更新日 2013-07-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of trans-2-enoyl-CoA reductases from Clostridium acetobutylicum and Treponema denticola: insights into the substrate specificity and the catalytic mechanism Biochem.J., 449, 2013
4E88	CRYSTAL STRUCTURE OF DE NOVO DESIGNED CYSTEINE ESTERASE ECH13, Northeast Structural Genomics Consortium Target OR51 分子名称: DE NOVO DESIGNED CYSTEINE ESTERASE ECH13, GLYCEROL 著者 Kuzin, A, Su, M, Seetharaman, J, Xiao, X, Sahdev, S, Ciccosanti, C, Richter, F, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG) 登録日 2012-03-19 公開日 2012-04-11 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Northeast Structural Genomics Consortium Target OR51 To be Published
4EXV	Structure of Kluyveromyces lactis Hsv2p 分子名称: SULFATE ION, SVP1-like protein 2 著者 Baskaran, S, Hurley, J.H. 登録日 2012-05-01 公開日 2012-07-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Two-Site Recognition of Phosphatidylinositol 3-Phosphate by PROPPINs in Autophagy. Mol.Cell, 47, 2012
4JKY	Cobalt between two ADP's in the active site of adenylate kinase 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, COBALT (II) ION 著者 Cho, Y.-J, Kern, D. 登録日 2013-03-12 公開日 2014-06-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.373 Å) 主引用文献 The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol., 22, 2015
4JLB	Crystal Structures of Adenylate kinase with 2ADP's 分子名称: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase 著者 Cho, Y.-J, Kern, D. 登録日 2013-03-12 公開日 2014-06-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.528 Å) 主引用文献 The energy landscape of adenylate kinase during catalysis. Nat.Struct.Mol.Biol., 22, 2015
4K06	Crystal structure of MTX-II from Bothrops brazili venom complexed with polyethylene glycol 分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, MTX-II, ... 著者 Fernandes, C.A.H, Comparetti, E.J, Borges, R.J, Fontes, M.R.M. 登録日 2013-04-03 公開日 2013-11-13 最終更新日 2013-11-27 実験手法 X-RAY DIFFRACTION (2.08 Å) 主引用文献 Structural bases for a complete myotoxic mechanism: Crystal structures of two non-catalytic phospholipases A2-like from Bothrops brazili venom. Biochim.Biophys.Acta, 1834, 2013
4K0K	Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V. 登録日 2013-04-04 公開日 2013-06-26 最終更新日 2013-08-21 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Unusual base pairing during the decoding of a stop codon by the ribosome. Nature, 500, 2013
4K38	Native anSMEcpe with bound AdoMet and Kp18Cys peptide 分子名称: Anaerobic sulfatase-maturating enzyme, CHLORIDE ION, GLYCEROL, ... 著者 Goldman, P.J, Drennan, C.L. 登録日 2013-04-10 公開日 2013-05-08 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.831 Å) 主引用文献 X-ray structure of an AdoMet radical activase reveals an anaerobic solution for formylglycine posttranslational modification. Proc.Natl.Acad.Sci.USA, 110, 2013
4EEE	Crystal Structure of YLDV 14L IL-18 Binding Protein in Complex with Human IL-18 分子名称: 14L protein, Interleukin-18 著者 Krumm, B.E, Xiang, Y, Deng, J. 登録日 2012-03-28 公開日 2012-09-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 A unique bivalent binding and inhibition mechanism by the yatapoxvirus interleukin 18 binding protein. Plos Pathog., 8, 2012
4K09	Crystal structure of BbTX-II from Bothrops brazili venom 分子名称: BbTX-II 著者 Fernandes, C.A.H, Comparetti, E.J, Borges, R.J, Fontes, M.R.M. 登録日 2013-04-03 公開日 2013-11-20 最終更新日 2013-11-27 実験手法 X-RAY DIFFRACTION (2.107 Å) 主引用文献 Structural bases for a complete myotoxic mechanism: Crystal structures of two non-catalytic phospholipases A2-like from Bothrops brazili venom. Biochim.Biophys.Acta, 1834, 2013
7P3T	Transaminase of gamma-proteobacterium 分子名称: Branched-chain amino acid aminotransferase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE 著者 Ermler, U. 登録日 2021-07-08 公開日 2021-12-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Rational engineering of Luminiphilus syltensis ( R )-selective amine transaminase for the acceptance of bulky substrates. Chem.Commun.(Camb.), 57, 2021

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