Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DCN
DownloadVisualize
BU of 4dcn by Molmil
Crystal Structure Analysis of the Arfaptin2 BAR domain in Complex with ARL1
分子名称: ADP-ribosylation factor-like protein 1, Arfaptin-2, MAGNESIUM ION, ...
著者Nakamura, K, Xie, Y, Kawasaki, M, Kato, R, Wakatsuki, S.
登録日2012-01-18
公開日2012-06-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural basis for membrane binding specificity of the Bin/Amphiphysin/Rvs (BAR) domain of Arfaptin-2 determined by Arl1 GTPase
J.Biol.Chem., 287, 2012
4KY6
DownloadVisualize
BU of 4ky6 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25D at pH 6 and cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Robinson, A.C, Schlessman, J.L, Garcia-Moreno E, B.
登録日2013-05-28
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS L25D at pH 6 and cryogenic temperature
To be Published
4KYV
DownloadVisualize
BU of 4kyv by Molmil
Crystal Structure of dehalogenase HaloTag2 with HALTS at the resolution 1.8A. Northeast Structural Genomics Consortium (NESG) Target OR150
分子名称: N-(2-ethoxy-3,5-dimethylbenzyl)-1H-tetrazol-5-amine, SODIUM ION, dehalogenase HaloTag2
著者Kuzin, A, Lew, S, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Wang, H, Everett, J.K, Acton, T.B, Kornhaber, G, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-05-29
公開日2013-07-24
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Northeast Structural Genomics Consortium Target OR150
To be Published
7NB4
DownloadVisualize
BU of 7nb4 by Molmil
Structure of Mcl-1 complex with compound 1
分子名称: (2~{R})-2-[[5-(3-chloranyl-2-methyl-phenyl)-6-ethyl-thieno[2,3-d]pyrimidin-4-yl]amino]-3-phenyl-propanoic acid, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Induced myeloid leukemia cell differentiation protein Mcl-1, ...
著者Dokurno, P, Surgenor, A.E, Kotschy, A.
登録日2021-01-25
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Effect of Core Replacement on S64315, a Selective MCL-1 Inhibitor, and Its Analogues.
Acs Omega, 6, 2021
7A03
DownloadVisualize
BU of 7a03 by Molmil
The Structure of CHT
分子名称: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Fernandes, G, Machado, E, Pereira, M, Brear, P, Lemos, E.
登録日2020-08-06
公開日2021-08-18
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Exploring the genome of Chitinophaga (CB10) for metalocarboxipeptidase activity
To Be Published
4L24
DownloadVisualize
BU of 4l24 by Molmil
Crystal structure of metallo-DNA duplex containing consecutive T-Hg(II)-T base pairs
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*TP*TP*TP*CP*GP*CP*G)-3'), MERCURY (II) ION
著者Kondo, J, Yamada, T, Hirose, C, Okamoto, I, Tanaka, Y, Ono, A.
登録日2013-06-04
公開日2014-03-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of Metallo DNA Duplex Containing Consecutive Watson-Crick-like T-Hg(II) -T Base Pairs
Angew.Chem.Int.Ed.Engl., 53, 2014
4DRT
DownloadVisualize
BU of 4drt by Molmil
Three dimensional structure of de novo designed serine hydrolase OSH26, Northeast Structural Genomics Consortium (NESG) target OR89
分子名称: CHLORIDE ION, SODIUM ION, de novo designed serine hydrolase, ...
著者Kuzin, A, Su, M, Rajagopalan, S, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2012-02-17
公開日2012-04-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
4L26
DownloadVisualize
BU of 4l26 by Molmil
Crystal structure of DNA duplex containing consecutive T-T mispairs (Br-derivative)
分子名称: DNA (5'-D(*CP*GP*(CBR)P*GP*AP*TP*TP*TP*CP*GP*CP*G)-3')
著者Kondo, J, Yamada, T, Hirose, C, Tanaka, Y, Ono, A.
登録日2013-06-04
公開日2014-03-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal Structure of Metallo DNA Duplex Containing Consecutive Watson-Crick-like T-Hg(II) -T Base Pairs
Angew.Chem.Int.Ed.Engl., 53, 2014
4LC5
DownloadVisualize
BU of 4lc5 by Molmil
Structural basis of substrate specificity of CDA superfamily guanine deaminase
分子名称: 1,2-ETHANEDIOL, 9-METHYLGUANINE, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
著者Bitra, A, Biswas, A, Anand, R.
登録日2013-06-21
公開日2014-01-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
4DPW
DownloadVisualize
BU of 4dpw by Molmil
Crystal structure of Staphylococcus epidermidis D283A mevalonate diphosphate decarboxylase complexed with mevalonate diphosphate and ATPgS
分子名称: (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID, FORMIC ACID, GLYCEROL, ...
著者Barta, M.L, McWhorter, W.J, Geisbrecht, B.V.
登録日2012-02-14
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.605 Å)
主引用文献Structural basis for nucleotide binding and reaction catalysis in mevalonate diphosphate decarboxylase.
Biochemistry, 51, 2012
4LD2
DownloadVisualize
BU of 4ld2 by Molmil
Crystal structure of NE0047 in complex with cytidine
分子名称: 1,2-ETHANEDIOL, 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, Cytidine and deoxycytidylate deaminase zinc-binding region, ...
著者Bitra, A, Biswas, A, Anand, R.
登録日2013-06-24
公開日2014-01-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of the substrate specificity of cytidine deaminase superfamily Guanine deaminase
Biochemistry, 52, 2013
4DVT
DownloadVisualize
BU of 4dvt by Molmil
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with AS-II-37
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-(4-chloro-3-fluorophenyl)-N'-[(1S)-1,2,3,4-tetrahydroisoquinolin-1-ylmethyl]ethanediamide, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2012-02-23
公開日2013-02-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site.
Plos One, 9, 2014
4LD6
DownloadVisualize
BU of 4ld6 by Molmil
PWWP domain of human PWWP Domain-Containing Protein 2B
分子名称: GLYCEROL, PWWP domain-containing protein 2B, UNKNOWN ATOM OR ION
著者Dong, A, Dombrovski, L, Tempel, W, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
登録日2013-06-24
公開日2013-07-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of PWWP domain of human PWWP Domain-Containing Protein 2B
To be Published
4DVX
DownloadVisualize
BU of 4dvx by Molmil
Crystal structure of clade A/E 93TH057 HIV-1 gp120 core in complex with MAE-II-188
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, N-(4-chloro-3-fluorophenyl)-N'-{[(3R)-1-cyclopropylpyrrolidin-3-yl]methyl}ethanediamide, ...
著者Kwon, Y.D, Kwong, P.D.
登録日2012-02-23
公開日2013-02-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structures of HIV-1 gp120 Envelope Glycoprotein in Complex with NBD Analogues That Target the CD4-Binding Site.
Plos One, 9, 2014
4L7E
DownloadVisualize
BU of 4l7e by Molmil
Three dimensional structure of mutant D78A of human HD domain-containing protein 2, Genomics Consortium (NESG) Target HR6723
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, HD domain-containing protein 2, ...
著者Kuzin, A, Su, M, Yakunin, A, Beloglazova, N, Seetharaman, J, Maglaqui, M, Xiao, R, Lee, D, Brown, G, Flick, R, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2013-06-13
公開日2013-07-24
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.229 Å)
主引用文献Northeast Structural Genomics Consortium Target HR6723
To be Published
4L9N
DownloadVisualize
BU of 4l9n by Molmil
Crystal structure of MepR A103V mutant from multidrug resistant S. aureus clinical isolate
分子名称: MepR, SULFATE ION
著者Birukou, I, Brennan, R.G.
登録日2013-06-18
公開日2013-09-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The molecular mechanisms of allosteric mutations impairing MepR repressor function in multidrug-resistant strains of Staphylococcus aureus.
MBio, 4, 2013
7A90
DownloadVisualize
BU of 7a90 by Molmil
WT STING in complex with 3',3'-c-di[2'FdAM(PS)]
分子名称: 9-[(1~{R},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-17-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13,16-hexaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.3.0.0^{6,10}]octadecan-8-yl]purin-6-amine, Stimulator of interferon protein
著者Boura, E, Smola, M.
登録日2020-09-01
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.185 Å)
主引用文献WT STING in complex with 3',3'-c-di[2'FdAM(PS)]
To Be Published
4KXZ
DownloadVisualize
BU of 4kxz by Molmil
crystal structure of tgfb2 in complex with GC2008.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, GC1008 Heavy Chain, ...
著者Mathieu, M, Moulin, A.G, Wei, R.
登録日2013-05-28
公開日2014-09-24
最終更新日2014-12-03
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structures of a pan-specific antagonist antibody complexed to different isoforms of TGF beta reveal structural plasticity of antibody-antigen interactions.
Protein Sci., 23, 2014
4L0M
DownloadVisualize
BU of 4l0m by Molmil
Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Borrelia burgdorferi B31 bound to Adenine (Target NYSGRC-029268 )
分子名称: ADENINE, putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
著者Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2013-05-31
公開日2013-08-14
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Borrelia burgdorferi B31 bound to Adenine (Target NYSGRC-029268 )
to be published
4L1S
DownloadVisualize
BU of 4l1s by Molmil
Covalent modification of transthyretin K15 by yielding the fluorescent conjugate (E)-3-(dimethylamino)-5-(4-hydroxy-3,5-dimethylstyryl)benzamide
分子名称: S-(4-fluorophenyl) 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzenecarbothioate, Transthyretin
著者Connelly, S, Wilson, I.A.
登録日2013-06-03
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Fluorogenic small molecules requiring reaction with a specific protein to create a fluorescent conjugate for biological imaging-what we know and what we need to learn.
Biopolymers, 101, 2014
4L5V
DownloadVisualize
BU of 4l5v by Molmil
The structural implications of the secondary CO2 binding pocket in human carbonic anhydrase II
分子名称: Carbonic anhydrase 2, GLYCEROL, ZINC ION
著者Boone, C.D, Gill, S, McKenna, R.
登録日2013-06-11
公開日2014-04-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural, catalytic and stabilizing consequences of aromatic cluster variants in human carbonic anhydrase II.
Arch.Biochem.Biophys., 539, 2013
6ZPP
DownloadVisualize
BU of 6zpp by Molmil
g7941: a virulence factor from Drechmaria coniospora
分子名称: CHLORIDE ION, virulence factor
著者Leone, P, Roussel, A, Zimberger, C.
登録日2020-07-09
公開日2022-01-19
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of a virulence factor from Drechmaria coniospora, a C. elegans pathogen
To Be Published
7SIH
DownloadVisualize
BU of 7sih by Molmil
Crystal Structure of HLA B*3503 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I
分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
著者Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M.
登録日2021-10-14
公開日2022-11-23
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular insights into the HLA-B35 molecules' classification associated with HIV control.
Immunol.Cell.Biol., 102, 2024
6ZX1
DownloadVisualize
BU of 6zx1 by Molmil
OMPD-domain of human UMPS in complex with 6-Aza-UMP at 1.0 Angstroms resolution
分子名称: 6-AZA URIDINE 5'-MONOPHOSPHATE, PROLINE, SULFATE ION, ...
著者Tittmann, K, Rindfleisch, S, Krull, M.
登録日2020-07-29
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
6ZX0
DownloadVisualize
BU of 6zx0 by Molmil
OMPD-domain of human UMPS in complex with the substrate OMP at 1.25 Angstroms resolution
分子名称: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ...
著者Tittmann, K, Rindfleisch, S, Krull, M.
登録日2020-07-29
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon