PDB: 224004 件ウェブページステータス検索Chemie searchBIRD

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8PZ7	crystal structure of VDR complex with D-Bishomo-1a,25-dihydroxyvitamin D3 Analog 57 分子名称: (1~{R},3~{R})-5-[(2~{E})-2-[(4~{a}~{R},5~{R},9~{a}~{S})-4~{a}-methyl-5-[(2~{R})-6-methyl-6-oxidanyl-heptan-2-yl]-3,4,5,8,9,9~{a}-hexahydro-2~{H}-benzo[7]annulen-1-ylidene]ethylidene]-2-methyl-cyclohexane-1,3-diol, Nuclear receptor coactivator 2, Vitamin D3 receptor A 著者 Rochel, N. 登録日 2023-07-27 公開日 2023-08-30 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Design, synthesis, and biological activity of D-bishomo-1 alpha ,25-dihydroxyvitamin D 3 analogs and their crystal structures with the vitamin D nuclear receptor. Eur.J.Med.Chem., 271, 2024
6Y6Q	Structure of Andes virus envelope glycoprotein Gc in postfusion conformation 分子名称: Envelope polyprotein, SULFATE ION, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Serris, A, Rey, F.A, Guardado-Calvo, P. 登録日 2020-02-27 公開日 2020-10-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism. Cell, 183, 2020
4WVW	Chicken Galectin-8 N-terminal domain complexed with 3'-sialyl-lactose 分子名称: DI(HYDROXYETHYL)ETHER, Galectin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose 著者 Ruiz, F.M, Romero, A. 登録日 2014-11-07 公開日 2015-09-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Combining Crystallography and Hydrogen-Deuterium Exchange to Study Galectin-Ligand Complexes. Chemistry, 21, 2015
8Q3F	Structural studies of human serum albumin using cryo-EM up to 0.38 nm resolution 分子名称: Serum albumin 著者 Slawek, J, Taube, M, Rawski, M, Wojciechowska, D, Kozak, M. 登録日 2023-08-04 公開日 2023-08-16 実験手法 ELECTRON MICROSCOPY (3.77 Å) 主引用文献 Structural studies of human serum albumin using cryo-EM up to 0.38 nm resolution To Be Published
4WZL	Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type Lea (triglycan) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, VP1, ... 著者 Singh, B.K, Hansman, G.S. 登録日 2014-11-20 公開日 2014-12-17 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Human noroviruses' fondness for histo-blood group antigens. J.Virol., 89, 2015
8Q63	Cryo-EM structure of IC8', a second state of yeast mitochondrial RNA polymerase transcription initiation complex with 8-mer RNA, pppGpGpUpApApApUpG 分子名称: DNA-directed RNA polymerase, mitochondrial, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Goovaerts, Q, Shen, J, Patel, S.S, Das, K. 登録日 2023-08-10 公開日 2023-08-30 最終更新日 2023-11-01 実験手法 ELECTRON MICROSCOPY (3.68 Å) 主引用文献 Structures illustrate step-by-step mitochondrial transcription initiation. Nature, 622, 2023
8PZ9	Crystal structure of VDR in complex with D-Bishomo-1a,25-dihydroxyvitamin D3 Analog 55 分子名称: (1~{R},3~{R})-5-[(2~{E})-2-[(4~{a}~{R},5~{R},9~{a}~{S})-4~{a}-methyl-5-[(2~{R})-6-methyl-6-oxidanyl-heptan-2-yl]-3,4,5,8,9,9~{a}-hexahydro-2~{H}-benzo[7]annulen-1-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol, Nuclear receptor coactivator 2, Vitamin D3 receptor A 著者 Rochel, N. 登録日 2023-07-27 公開日 2023-08-30 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.74 Å) 主引用文献 Design, synthesis, and biological activity of D-bishomo-1 alpha ,25-dihydroxyvitamin D 3 analogs and their crystal structures with the vitamin D nuclear receptor. Eur.J.Med.Chem., 271, 2024
6PEL	Crystal structure of bovine opsin with citronellol bound 分子名称: (3R)-3,7-dimethyloct-6-en-1-ol, ILENLKDVGLF G alpha peptide CT2, PALMITIC ACID, ... 著者 Eger, B.T, Morizumi, T, Ernst, O.P. 登録日 2019-06-20 公開日 2020-06-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.186 Å) 主引用文献 Odorant-binding site in visual opsin To Be Published
4X1Z	Crystal structure of RHDVb P domain in complex with H type 2 分子名称: SODIUM ION, VP1, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose 著者 Leuthold, M.M, Hansman, G.S. 登録日 2014-11-25 公開日 2015-01-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Structural analysis of a rabbit hemorrhagic disease virus binding to histo-blood group antigens. J.Virol., 89, 2015
4WZK	Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type H2 (triglycan) 分子名称: ACETATE ION, VP1, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose 著者 Singh, B.K, Hansman, G.S. 登録日 2014-11-20 公開日 2014-12-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Human noroviruses' fondness for histo-blood group antigens. J.Virol., 89, 2015
4WZT	Crystal structure of P domain from norovirus strain NSW0514 in complex with HBGA type A (triglycan) 分子名称: 1,2-ETHANEDIOL, VP1, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose 著者 Singh, B.K, Hansman, G.S. 登録日 2014-11-20 公開日 2014-12-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Human noroviruses' fondness for histo-blood group antigens. J.Virol., 89, 2015
8Q1N	Cyclic peptide binder of the WBM-site of WDR5 分子名称: Cyclic peptide inhibitor, WD repeat-containing protein 5 著者 Schmeing, S, Chang, J.Y, t Hart, P, Gasper, R. 登録日 2023-08-01 公開日 2023-09-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.843 Å) 主引用文献 Macrocyclic peptides as inhibitors of WDR5-lncRNA interactions. Chem.Commun.(Camb.), 59, 2023
5I9Q	Crystal structure of 3BNC55 Fab in complex with 426c.TM4deltaV1-3 gp120 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC55 Fab heavy chain, ... 著者 Scharf, L, Chen, C, Bjorkman, P.J. 登録日 2016-02-20 公開日 2016-05-04 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for germline antibody recognition of HIV-1 immunogens. Elife, 5, 2016
4X1X	Crystal structure of RHDVb P domain in complex with Lewis Y 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, VP1, ... 著者 Leuthold, M.M, Hansman, G.S. 登録日 2014-11-25 公開日 2015-01-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural analysis of a rabbit hemorrhagic disease virus binding to histo-blood group antigens. J.Virol., 89, 2015
8PSE	(3+1) hybrid G-quadruplex from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*AP*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*(BG)P*GP*TP*AP*CP*GP*GP*GP*T)-3') 著者 Jana, J, Vianney, Y.M, Schroder, N, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
4X7R	Crystal structure of S. aureus TarM G117R mutant in complex with Fondaparinux, alpha-GlcNAc-glycerol and UDP 分子名称: (2S)-2,3-dihydroxypropyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, TarM, ... 著者 Worrall, L.J, Sobhanifar, S, Strynadka, N.C. 登録日 2014-12-09 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase. Proc.Natl.Acad.Sci.USA, 112, 2015
8PSI	G-quadruplex with a 1-nt V-shaped loop from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*GP*GP*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
5EWM	CRYSTAL STRUCTURE OF AMINO TERMINAL DOMAINS OF THE NMDA RECEPTOR SUBUNIT GLUN1 AND GLUN2B IN COMPLEX WITH EVT-101 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[3-[bis(fluoranyl)methyl]-4-fluoranyl-phenyl]-3-[(2-methylimidazol-1-yl)methyl]pyridazine, Glutamate receptor ionotropic, ... 著者 Pandit, J. 登録日 2015-11-20 公開日 2016-03-02 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 A Novel Binding Mode Reveals Two Distinct Classes of NMDA Receptor GluN2B-selective Antagonists. Mol.Pharmacol., 89, 2016
8PHW	Human OATP1B1 分子名称: CHOLESTEROL HEMISUCCINATE, Fab18 (heavy chain, variable region), ... 著者 Ciuta, A.-D, Nosol, K, Kowal, J, Mukherjee, S, Ramirez, A.S, Stieger, B, Kossiakoff, A.A, Locher, K.P. 登録日 2023-06-20 公開日 2023-09-27 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of human drug transporters OATP1B1 and OATP1B3. Nat Commun, 14, 2023
8PMB	Minimal I-motif comprising three cytosine-cytosine+ base-pairs 分子名称: minimal I-motif C21T333 著者 Ghezzo, M, Trajkovski, M, Plavec, J, Sissi, C. 登録日 2023-06-28 公開日 2023-09-13 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 A Screening Protocol for Exploring Loop Length Requirements for the Formation of a Three Cytosine-Cytosine + Base-Paired i-Motif. Angew.Chem.Int.Ed.Engl., 62, 2023
8PSC	Three-layered basket-type G-quadruplex from a G-rich sequence with five G-runs 分子名称: DNA (5'-D(*AP*GP*(BG)P*GP*TP*AP*GP*GP*GP*CP*GP*GP*CP*GP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3') 著者 Vianney, Y.M, Schroeder, N, Jana, J, Weisz, K. 登録日 2023-07-13 公開日 2023-09-27 最終更新日 2023-10-18 実験手法 SOLUTION NMR 主引用文献 Showcasing Different G-Quadruplex Folds of a G-Rich Sequence: Between Rule-Based Prediction and Butterfly Effect. J.Am.Chem.Soc., 145, 2023
6Y74	X-ray crystal structure of human carbonic anhydrase IX catalytic domain. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHLORIDE ION, ... 著者 Fisher, S.Z, Koruza, K. 登録日 2020-02-28 公開日 2020-08-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Biophysical Characterization of Cancer-Related Carbonic Anhydrase IX Int J Mol Sci, 21, 2020
6Y78	Structure of galectin-3C in complex with lactose determined by serial crystallography using a silicon nitride membrane support 分子名称: Galectin-3, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Hakansson, M, Welin, M, Shilova, A, Kovacic, R, Mueller, U, Logan, D.T. 登録日 2020-02-28 公開日 2020-07-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Current status and future opportunities for serial crystallography at MAX IV Laboratory. J.Synchrotron Radiat., 27, 2020
4WMT	STRUCTURE OF MBP-MCL1 BOUND TO ligand 1 AT 2.35A 分子名称: 1,2-ETHANEDIOL, 7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid, FORMIC ACID, ... 著者 Clifton, M.C, Dranow, D.M. 登録日 2014-10-09 公開日 2015-05-06 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1. Plos One, 10, 2015
7B01	ADAMTS13-CUB12 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Maltodextrin-binding protein,Maltodextrin-binding protein,Maltodextrin-binding protein,ADAMTS13 CUB12,A disintegrin and metalloproteinase with thrombospondin motifs 13,A disintegrin and metalloproteinase with thrombospondin motifs 13,A disintegrin and metalloproteinase with thrombospondin motifs 13, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose 著者 Kim, H.J, Emsley, J. 登録日 2020-11-18 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of ADAMTS13 CUB domains reveals their role in global latency. Sci Adv, 7, 2021

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