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PDB: 10 results

2LED
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BU of 2led by Molmil
Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
Authors:Trajkovski, M, Plavec, J, Webba da Silva, M.
Deposit date:2011-06-15
Release date:2012-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
2LEE
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BU of 2lee by Molmil
Unique structural features of interconverting monomeric and dimeric G-quadruplexes adopted by a sequence from intron of N-myc gene
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*CP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*A)-3')
Authors:Trajkovski, M, Plavec, J, Webba da Silva, M.
Deposit date:2011-06-15
Release date:2012-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Unique Structural Features of Interconverting Monomeric and Dimeric G-Quadruplexes Adopted by a Sequence from the Intron of the N-myc Gene.
J.Am.Chem.Soc., 134, 2012
8Q5Q
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BU of 8q5q by Molmil
d(ATTTC)3 dimeric structure
Descriptor: DNA (5'-D(*AP*TP*TP*TP*(DNR)P*AP*TP*TP*TP*CP*AP*TP*TP*TP*C)-3')
Authors:Trajkovski, M, Pastore, A, Plavec, J.
Deposit date:2023-08-09
Release date:2024-02-07
Last modified:2024-03-06
Method:SOLUTION NMR
Cite:Dimeric structures of DNA ATTTC repeats promoted by divalent cations.
Nucleic Acids Res., 52, 2024
5NYS
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BU of 5nys by Molmil
M2 G-quadruplex dilute solution
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
Authors:Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N.
Deposit date:2017-05-11
Release date:2018-04-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
5NYU
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BU of 5nyu by Molmil
M2 G-quadruplex 10 wt% PEG8000
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
Authors:Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N.
Deposit date:2017-05-11
Release date:2018-04-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
5NYT
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BU of 5nyt by Molmil
M2 G-quadruplex 20 wt% ethylene glycol
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*AP*CP*GP*GP*GP*CP*GP*GP*GP*CP*AP*GP*GP*GP*T)-3')
Authors:Trajkovski, M, Plavec, J, Endoh, T, Tateishi-Karimata, H, Sugimoto, N.
Deposit date:2017-05-11
Release date:2018-04-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations.
Nucleic Acids Res., 46, 2018
7QA9
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BU of 7qa9 by Molmil
10bp DNA/DNA duplex
Descriptor: DNA (5'-D(*CP*CP*AP*TP*TP*AP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*GP*G)-3')
Authors:Li, Q, Trajkovski, M, Fan, C, Chen, J, Zhou, Y, Lu, K, Li, H, Su, X, Xi, Z, Plavec, J, Zhou, C.
Deposit date:2021-11-16
Release date:2022-11-16
Last modified:2022-11-23
Method:SOLUTION NMR
Cite:4'-SCF 3 -Labeling Constitutes a Sensitive 19 F NMR Probe for Characterization of Interactions in the Minor Groove of DNA.
Angew.Chem.Int.Ed.Engl., 61, 2022
8PMB
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BU of 8pmb by Molmil
Minimal I-motif comprising three cytosine-cytosine+ base-pairs
Descriptor: minimal I-motif C21T333
Authors:Ghezzo, M, Trajkovski, M, Plavec, J, Sissi, C.
Deposit date:2023-06-28
Release date:2023-09-13
Last modified:2023-10-18
Method:SOLUTION NMR
Cite:A Screening Protocol for Exploring Loop Length Requirements for the Formation of a Three Cytosine-Cytosine + Base-Paired i-Motif.
Angew.Chem.Int.Ed.Engl., 62, 2023
7Z9L
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BU of 7z9l by Molmil
Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Ghosh, A, Trajkovski, M, Teulade-Fichou, M.P, Gabelica, V, Plavec, J.
Deposit date:2022-03-21
Release date:2022-08-31
Last modified:2022-10-05
Method:SOLUTION NMR
Cite:Phen-DC 3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation.
Angew.Chem.Int.Ed.Engl., 61, 2022
7W0V
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BU of 7w0v by Molmil
C4'-SCF3-DT modifeid DNA-DNA duplex
Descriptor: DNA (5'-D(*CP*CP*AP*TP*(DSW)P*AP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*GP*G)-3')
Authors:Li, Q, Trajkovski, M, Fan, C, Chen, J, Zhou, Y, Lu, K, Li, H, Su, X, Xi, Z, Plavec, J, Zhou, C.
Deposit date:2021-11-18
Release date:2022-11-16
Last modified:2022-11-30
Method:SOLUTION NMR
Cite:4'-SCF 3 -Labeling Constitutes a Sensitive 19 F NMR Probe for Characterization of Interactions in the Minor Groove of DNA.
Angew.Chem.Int.Ed.Engl., 61, 2022

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