PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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4YD8	Bardet-Biedl Syndrome 9 Protein (aa1-407), Homo sapiens 分子名称: Protein PTHB1 著者 Knockenhauer, K.E, Schwartz, T.U. 登録日 2015-02-21 公開日 2015-06-24 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Characterization of Bardet-Biedl Syndrome 9 Protein (BBS9). J.Biol.Chem., 290, 2015
7QD6	Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with strand-transfer like DNA product 分子名称: IR71st non transferred strand, IR71st transferred strand, Transposase for transposon Tn4430 著者 Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. 登録日 2021-11-26 公開日 2022-10-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
4YEC	Crystal structure of a clostripain (PARMER_00083) from Parabacteroides merdae ATCC 43184 in complex with peptide inhibitor Ac-VLTK-AOMK 分子名称: Clostripain family, Peptide inhibitor Ac-VLTK-AOMK 著者 Wolan, D.W, Gonzalez-Paez, G.E, Chatterjee, S. 登録日 2015-02-24 公開日 2016-03-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.12 Å) 主引用文献 Substrate Profiling and High Resolution Co-complex Crystal Structure of a Secreted C11 Protease Conserved across Commensal Bacteria. ACS Chem. Biol., 12, 2017
7UCF	Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24 分子名称: 10-1074 Fab heavy chain, 10-1074 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Barnes, C.O, Bjorkman, P.J. 登録日 2022-03-16 公開日 2022-08-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 A naturally arising broad and potent CD4-binding site antibody with low somatic mutation. Sci Adv, 8, 2022
8PC6	H3K36me3 nucleosome-LEDGF/p75 PWWP domain complex - pose 2 分子名称: Histone H2A, Histone H2B 1.1, Histone H3, ... 著者 Koutna, E, Kouba, T, Veverka, V. 登録日 2023-06-09 公開日 2023-08-16 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.04 Å) 主引用文献 Multivalency of nucleosome recognition by LEDGF. Nucleic Acids Res., 51, 2023
7QD5	Cryo-EM structure of Tn4430 TnpA transposase from Tn3 family in complex with 48 bp long transposon end DNA 分子名称: IR48 DNA substrate, non transferred strand, IR48 transferred strand, ... 著者 Shkumatov, A.V, Oger, C.A, Aryanpour, N, Hallet, B.F, Efremov, R.G. 登録日 2021-11-26 公開日 2022-10-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insight into Tn3 family transposition mechanism. Nat Commun, 13, 2022
7UCE	Structure of the anti-HIV-1 neutralizing antibody BG24 Fab fragment 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG24 Fab heavy chain, BG24 Fab light chain 著者 Barnes, C.O, Bjorkman, P.J. 登録日 2022-03-16 公開日 2022-08-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 A naturally arising broad and potent CD4-binding site antibody with low somatic mutation. Sci Adv, 8, 2022
7Y27	Cryo-EM structure of the SST-14-bound SSTR2-miniGq-scFv16 complex 分子名称: CHOLESTEROL, Engineered Guanine nucleotide-binding protein G(q) subunit alpha, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... 著者 Chen, S, Zheng, S. 登録日 2022-06-09 公開日 2022-10-19 最終更新日 2023-02-15 実験手法 ELECTRON MICROSCOPY (3.48 Å) 主引用文献 Molecular basis for the selective G protein signaling of somatostatin receptors. Nat.Chem.Biol., 19, 2023
4RWS	Crystal structure of CXCR4 and viral chemokine antagonist vMIP-II complex (PSI Community Target) 分子名称: C-X-C chemokine receptor type 4/Endolysin chimeric protein, Viral macrophage inflammatory protein 2 著者 Qin, L, Kufareva, I, Holden, L, Wang, C, Zheng, Y, Wu, H, Fenalti, G, Han, G.W, Cherezov, V, Abagyan, R, Stevens, R.C, Handel, T.M, GPCR Network (GPCR) 登録日 2014-12-05 公開日 2015-02-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural biology. Crystal structure of the chemokine receptor CXCR4 in complex with a viral chemokine. Science, 347, 2015
7Y26	Cryo-EM structure of the octreotide-bound SSTR2-miniGq-scFv16 complex 分子名称: Engineered Guanine nucleotide-binding protein G(q) subunit alpha, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Chen, S, Zheng, S. 登録日 2022-06-09 公開日 2022-10-19 最終更新日 2023-02-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Molecular basis for the selective G protein signaling of somatostatin receptors. Nat.Chem.Biol., 19, 2023
3QMS	Crystal structure of the mutant T159V,V182A,Y206F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-02-05 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.32 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
6YZ2	Full length Open-form Sodium Channel NavMs F208L 分子名称: DODECAETHYLENE GLYCOL, HEGA-10, Ion transport protein, ... 著者 Sula, A, Sait, L.G, Hollingworth, D, Wallace, B.A. 登録日 2020-05-06 公開日 2020-11-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Cannabidiol interactions with voltage-gated sodium channels. Elife, 9, 2020
7XT7	RNA polymerase II elongation complex transcribing a nucleosome (EC49B) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-16 公開日 2022-10-12 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
7XTI	RNA polymerase II elongation complex transcribing a nucleosome (EC58hex) 分子名称: Component of the Paf1p complex, Constituent of Paf1 complex with RNA polymerase II, Paf1p, ... 著者 Ehara, H, Kujirai, T, Shirouzu, M, Kurumizaka, H, Sekine, S. 登録日 2022-05-17 公開日 2022-10-12 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis of nucleosome disassembly and reassembly by RNAPII elongation complex with FACT. Science, 377, 2022
8P0Z	AP01-S2.3 - a variant of a redesigned transferrin receptor apical domain 分子名称: BORIC ACID, SODIUM ION, Transferrin receptor protein 1, ... 著者 Oberdorfer, G, Grill, B, Bjelic, S, Stoll, D. 登録日 2023-05-11 公開日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Affinity Maturated Transferrin Receptor Apical Domain Blocks Machupo Virus Glycoprotein Binding. J.Mol.Biol., 435, 2023
4WWU	Structure of Mex67:Mtr2 分子名称: ZINC ION, mRNA export factor MEX67, mRNA transport regulator MTR2 著者 Aibara, S, Valkov, E, Stewart, M. 登録日 2014-11-12 公開日 2015-02-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.301 Å) 主引用文献 Domain organization within the nuclear export factor Mex67:Mtr2 generates an extended mRNA binding surface. Nucleic Acids Res., 43, 2015
4RP3	Crystal Structure of the L27 Domain of Discs Large 1 (target ID NYSGRC-010766) from Drosophila melanogaster bound to a potassium ion (space group P212121) 分子名称: CHLORIDE ION, Disks large 1 tumor suppressor protein, FORMIC ACID, ... 著者 Ghosh, A, Ramagopal, U, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2014-10-29 公開日 2014-11-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Structures of the L27 Domain of Disc Large Homologue 1 Protein Illustrate a Self-Assembly Module. Biochemistry, 57, 2018
3QF0	Crystal structure of the mutant T159V,Y206F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-01-20 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
6QCI	Structure of XIAP-BIR1 V86E mutant 分子名称: DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase XIAP, SODIUM ION, ... 著者 Sorrentino, L, Cossu, F, Milani, M, Mastrangelo, E. 登録日 2018-12-28 公開日 2019-05-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure-Activity Relationship of NF023 Derivatives Binding to XIAP-BIR1. Chemistryopen, 8, 2019
4WV5	HEAT SHOCK PROTEIN 70 SUBSTRATE BINDING DOMAIN 分子名称: GLYCEROL, Heat shock 70 kDa protein 1A/1B 著者 Kirby, C, Stams, T, Baird, J. 登録日 2014-11-04 公開日 2015-01-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 The novolactone natural product disrupts the allosteric regulation of hsp70. Chem.Biol., 22, 2015
8PBB	CHAPSO treated partial catalytic component (comprising only AnfD & AnfK, lacking AnfG and FeFeco) of iron nitrogenase from Rhodobacter capsulatus 分子名称: FE(8)-S(7) CLUSTER, Nitrogenase iron-iron protein, beta subunit, ... 著者 Schmidt, F.V, Schulz, L, Zarzycki, J, Prinz, S, Erb, T.J, Rebelein, J.G. 登録日 2023-06-09 公開日 2023-10-04 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Structural insights into the iron nitrogenase complex. Nat.Struct.Mol.Biol., 31, 2024
6QCK	17beta-hydroxysteroid dehydrogenase 14 variant T205 in complex with FB262 分子名称: 17-beta-hydroxysteroid dehydrogenase 14, 2-[2-(1,3-benzodioxol-2-yl)ethyl]benzoic acid, DIMETHYL SULFOXIDE, ... 著者 Bertoletti, N, Marchais-Oberwinkler, S, Heine, A, Klebe, G. 登録日 2018-12-28 公開日 2020-01-29 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Mutational and structural studies uncover crucial amino acids determining activity and stability of 17 beta-HSD14. J.Steroid Biochem.Mol.Biol., 189, 2019
7NYH	Respiratory complex I from Escherichia coli - focused refinement of membrane arm 分子名称: NADH-quinone oxidoreductase subunit A, NADH-quinone oxidoreductase subunit H, NADH-quinone oxidoreductase subunit J, ... 著者 Kolata, P, Efremov, R.G. 登録日 2021-03-22 公開日 2021-08-18 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation. Elife, 10, 2021
7NZ1	Respiratory complex I from Escherichia coli - focused refinement of cytoplasmic arm 分子名称: CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ... 著者 Kolata, P, Efremov, R.G. 登録日 2021-03-23 公開日 2021-08-18 実験手法 ELECTRON MICROSCOPY (2.1 Å) 主引用文献 Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation. Elife, 10, 2021
7O1I	Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-E141A mutant 分子名称: 3-hydroxyacyl-CoA dehydrogenase, COENZYME A, GLYCEROL, ... 著者 Dalwani, S, Wierenga, R.K, Venkatesan, R. 登録日 2021-03-29 公開日 2021-08-25 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Substrate specificity and conformational flexibility properties of the Mycobacterium tuberculosis beta-oxidation trifunctional enzyme. J.Struct.Biol., 213, 2021

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