Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1K2W
DownloadVisualize
BU of 1k2w by Molmil
Crystal structure of sorbitol dehydrogenase from R. sphaeroides
分子名称: SORBITOL DEHYDROGENASE
著者Philippsen, A, Schirmer, T, Stetefeld, J.
登録日2001-09-29
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of zinc-independent sorbitol dehydrogenase from Rhodobacter sphaeroides at 2.4 A resolution.
Acta Crystallogr.,Sect.D, 61, 2005
4FNJ
DownloadVisualize
BU of 4fnj by Molmil
Utilizing the GAAA tetraloop/receptor to facilitate crystal packing and structure determination of a CUG RNA helix
分子名称: MAGNESIUM ION, RNA (35-MER)
著者Coonrod, L.A, Lohman, J.R, Berglund, J.A.
登録日2012-06-19
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Utilizing the GAAA Tetraloop/Receptor To Facilitate Crystal Packing and Determination of the Structure of a CUG RNA Helix.
Biochemistry, 51, 2012
4JL3
DownloadVisualize
BU of 4jl3 by Molmil
Crystal structure of ms6564-dna complex
分子名称: DNA (31-MER), Transcriptional regulator, TetR family
著者Yang, S.F, Gao, Z.Q, He, Z.G, Dong, Y.H.
登録日2013-03-12
公開日2013-06-26
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for interaction between Mycobacterium smegmatis Ms6564, a TetR family master regulator, and its target DNA.
J.Biol.Chem., 288, 2013
5M4W
DownloadVisualize
BU of 5m4w by Molmil
Structure of DNA AGCGA-quadruplex adopted by 15-mer oligonucleotide found in regulatory region of the PLEKHG3 human gene with G11 to I11 mutation, d(GCGAGGGAGCIAGGG),VK34_I11
分子名称: DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*IP*AP*GP*GP*G)-3')
著者Kocman, V, Plavec, J.
登録日2016-10-19
公開日2017-05-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions.
Nat Commun, 8, 2017
4UCU
DownloadVisualize
BU of 4ucu by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 8-hydroxyquinoline-2-carboxylic acid, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
3OTW
DownloadVisualize
BU of 3otw by Molmil
Structural and Functional Studies of Helicobacter pylori Wild-Type and Mutated Proteins Phosphopantetheine adenylyltransferase
分子名称: COENZYME A, Phosphopantetheine adenylyltransferase, SULFATE ION
著者Yin, H.S, Cheng, C.S, Chen, C.G, Luo, Y.C, Chen, W.T, Cheng, S.Y.
登録日2010-09-14
公開日2011-09-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and Functional Studies of Helicobacter pylori Wild-Type and Mutated Proteins Phosphopantetheine adenylyltransferase
To be Published
4UCT
DownloadVisualize
BU of 4uct by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 2-amino-6-methyl-5-(propan-2-yloxy)-3H-[1,2,4]triazolo[1,5-a]pyrimidin-8-ium, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
3HMV
DownloadVisualize
BU of 3hmv by Molmil
Catalytic domain of human phosphodiesterase 4B2B in complex with a tetrahydrobenzothiophene inhibitor
分子名称: (6S)-6-methyl-2-{[(2-nitrophenyl)carbonyl]amino}-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide, GLYCEROL, MAGNESIUM ION, ...
著者Somers, D.O, Neu, M.
登録日2009-05-29
公開日2010-06-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Identification of PDE4B Over 4D subtype-selective inhibitors revealing an unprecedented binding mode
Bioorg.Med.Chem., 17, 2009
4OGB
DownloadVisualize
BU of 4ogb by Molmil
Crystal structure of the catalytic domain of PDE4D2 with compound 2
分子名称: (2R)-8-(3,4-dimethoxyphenyl)-6-methyl-2-(tetrahydro-2H-pyran-4-yl)-2H-chromen-4-ol, 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Feil, S.C, Parker, M.W.
登録日2014-01-15
公開日2015-01-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.032 Å)
主引用文献The PDE inhibition profile of LY294002 and tetrahydropyranyl analogues reveals a chromone motif for the development of PDE inhibitors
To be Published
4UCV
DownloadVisualize
BU of 4ucv by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 8-methoxy-2,3-dimethylquinoxalin-5-ol, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
4UCO
DownloadVisualize
BU of 4uco by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 7-amino-2-tert-butyl-4-(1H-pyrrol-2-yl)pyrido[2,3-d]pyrimidine-6-carboxamide, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
4UCR
DownloadVisualize
BU of 4ucr by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 8-hydroxy-2-methylquinoline-6-carboxamide, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
4UCS
DownloadVisualize
BU of 4ucs by Molmil
Fragment bound to H.influenza NAD dependent DNA ligase
分子名称: 1-(2,4-dimethylbenzyl)-6-oxo-1,6-dihydropyridine-3-carboxamide, 5-amino-3-(furan-2-yl)-1H-1,2,4-triazole-1-carboxamide, DNA LIGASE
著者Hale, M, Brassington, C, Carcanague, D, Embrey, K, Eyermann, C.J, Giacobbe, R.A, Gingipali, L, Gowravaram, M, Harang, J, Howard, T, Ioannidis, G, Jahic, H, Kutschke, A, Laganas, V.A, Loch, J, Miller, M.D, Murphy-Benenato, K.E, Oguto, H, Otterbein, L, Patel, S.J, Shapiro, A.B, Boriack-Sjodin, P.A.
登録日2014-12-04
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献From Fragments to Leads: Novel Bacterial Nad+-Dependent DNA Ligase Inhibitors
Tetrahedron Lett., 56, 2015
4CGR
DownloadVisualize
BU of 4cgr by Molmil
Structure of Regulator Protein SCO3201 from Streptomyces coelicolor
分子名称: PHOSPHATE ION, PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR
著者Waack, P, Werten, S, Hinrichs, W.
登録日2013-11-26
公開日2014-07-09
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Regulatory Targets of Sco3201, a Highly Promiscuous Tetr-Like Regulator of Streptomyces Coelicolor M145.
Biochem.Biophys.Res.Commun., 450, 2014
3GZI
DownloadVisualize
BU of 3gzi by Molmil
CRYSTAL STRUCTURE OF a transcriptional regulator of the tetR family (SHEW_3567) FROM SHEWANELLA LOIHICA PV-4 AT 2.05 A RESOLUTION
分子名称: 1,2-ETHANEDIOL, Transcriptional regulator, TetR family, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-04-07
公開日2009-04-21
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of TETR family transcriptional regulator (YP_001095692.1) from SHEWANELLA SP. PV-4 at 2.05 A resolution
To be published
5A2S
DownloadVisualize
BU of 5a2s by Molmil
Potent, selective and CNS-penetrant tetrasubstituted cyclopropane class IIa histone deacetylase (HDAC) inhibitors
分子名称: (1S,2S,3S)-1-fluoranyl-2-[4-(5-fluoranylpyrimidin-2-yl)phenyl]-N-oxidanyl-3-phenyl-cyclopropane-1-carboxamide, HISTONE DEACETYLASE 4, SODIUM ION, ...
著者Luckhurst, C.A, Breccia, P, Stott, A.J, Aziz, O, Birch, H, Burli, R.W, Hughes, S, Jarvis, R.E, Lamers, M, Leonard, P, Matthews, K.L, McAllister, G, Pollack, S, Saville-Stones, E, Wishart, G, Yates, D, Dominguez, C.
登録日2015-05-22
公開日2016-02-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Potent, Selective, and Cns-Penetrant Tetrasubstituted Cyclopropane Class Iia Histone Deacetylase (Hdac) Inhibitors.
Acs Med.Chem.Lett., 7, 2016
7KD1
DownloadVisualize
BU of 7kd1 by Molmil
Apo structure of the THF riboswitch aptamer domain
分子名称: MAGNESIUM ION, SULFATE ION, tetrahydrofolate riboswitch aptamer domain
著者Wilt, H.M, Stagno, J.R, Wang, Y.-X.
登録日2020-10-07
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Tying the knot in the tetrahydrofolate (THF) riboswitch: A molecular basis for gene regulation.
J.Struct.Biol., 213, 2021
3HH1
DownloadVisualize
BU of 3hh1 by Molmil
The Structure of a Tetrapyrrole methylase family protein domain from Chlorobium tepidum TLS
分子名称: 1,2-ETHANEDIOL, SULFATE ION, Tetrapyrrole methylase family protein
著者Cuff, M.E, Sather, A, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2009-05-14
公開日2009-07-07
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Structure of a Tetrapyrrole methylase family protein domain from Chlorobium tepidum TLS.
TO BE PUBLISHED
3NI7
DownloadVisualize
BU of 3ni7 by Molmil
Crystal structure of the TetR transcriptional regulator from Nitrosomonas europaea ATCC 19718
分子名称: Bacterial regulatory proteins, TetR family
著者Knapik, A, Chruszcz, M, Cymborowski, M, Xu, X, Savchenko, A, Edwards, A, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2010-06-15
公開日2010-08-11
最終更新日2022-04-13
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of the TetR transcriptional regulator from Nitrosomonas europaea ATCC 19718
To be Published
6SQ0
DownloadVisualize
BU of 6sq0 by Molmil
ERa_L536S (L536S/C381S/C471S,C530S) in complex with a bridged tetracyclic indole (compound 8)
分子名称: Bridged tetracyclic indole, Estrogen receptor
著者Breed, J.
登録日2019-09-03
公開日2019-10-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Building Bridges in a Series of Estrogen Receptor Degraders: An Application of Metathesis in Medicinal Chemistry.
Acs Med.Chem.Lett., 10, 2019
7BDZ
DownloadVisualize
BU of 7bdz by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (1)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
著者Loreto, D, Merlino, A, Ferraro, G.
登録日2020-12-22
公開日2021-02-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BEC
DownloadVisualize
BU of 7bec by Molmil
Unusual structural features in the adduct of dirhodium tetraacetate with lysozyme (5)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
著者Loreto, D, Ferraro, G, Merlino, A.
登録日2020-12-23
公開日2021-02-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BEB
DownloadVisualize
BU of 7beb by Molmil
Unusual structural features in the adduct of dirhodium tetraacetate with lysozyme (4)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
著者Loreto, D, Ferraro, G, Merlino, A.
登録日2020-12-23
公開日2021-02-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BE2
DownloadVisualize
BU of 7be2 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (6)
分子名称: ACETATE ION, GLYCEROL, Lysozyme, ...
著者Loreto, D, Merlino, A, Ferraro, G.
登録日2020-12-22
公開日2021-02-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021
7BE1
DownloadVisualize
BU of 7be1 by Molmil
X-ray structure of Hen Egg White Lysozyme with dirhodium tetraacetate (3)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Lysozyme, ...
著者Loreto, D, Merlino, A, Ferraro, G.
登録日2020-12-22
公開日2021-02-24
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Unusual Structural Features in the Adduct of Dirhodium Tetraacetate with Lysozyme.
Int J Mol Sci, 22, 2021

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon