PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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7TH0	Escherichia coli RpnA-S 分子名称: Recombination-promoting nuclease RpnA 著者 Zhong, A, Hickman, A.B, Storz, G, Dyda, F. 登録日 2022-01-10 公開日 2023-03-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Toxic antiphage defense proteins inhibited by intragenic antitoxin proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
4QNH	Calcium-calmodulin (T79D) complexed with the calmodulin binding domain from a small conductance potassium channel SK2-a 分子名称: CALCIUM ION, Calmodulin, SULFATE ION, ... 著者 Zhang, M, Pascal, J.M, Logothetis, D.E, Zhang, J.F. 登録日 2014-06-17 公開日 2014-08-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Selective phosphorylation modulates the PIP2 sensitivity of the CaM-SK channel complex. Nat.Chem.Biol., 10, 2014
3RLU	Crystal structure of the mutant K82A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-04-20 公開日 2012-04-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
5O3Q	Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with cyclic AMP (cAMP) 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, BICARBONATE ION, Membrane-associated protein slr1513 著者 Selim, K.A, Albrecht, R, Forchhammer, K, Hartmann, M.D. 登録日 2017-05-24 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 PII-like signaling protein SbtB links cAMP sensing with cyanobacterial inorganic carbon response. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6PEE	InvG secretin domain beta-barrel from Salmonella SPI-1 injectisome NC-base 分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Protein InvG 著者 Hu, J, Worrall, L.J, Strynadka, N.C.J. 登録日 2019-06-20 公開日 2019-10-23 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly. Nat Microbiol, 4, 2019
2CFB	Glutamate-1-semialdehyde 2,1-Aminomutase from Thermosynechococcus elongatus 分子名称: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 著者 Schulze, J.O, Schubert, W.-D, Moser, J, Jahn, D, Heinz, D.W. 登録日 2006-02-17 公開日 2006-03-29 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Evolutionary Relationship between Initial Enzymes of Tetrapyrrole Biosynthesis J.Mol.Biol., 358, 2006
7O45	Crystal structure of ADD domain of the human DNMT3B methyltransferase 分子名称: BROMIDE ION, Isoform 6 of DNA (cytosine-5)-methyltransferase 3B, ZINC ION 著者 Boyko, K.M, Nikolaeva, A.Y, Bonchuk, A.N, Georgiev, P.G, Popov, V.O. 登録日 2021-04-05 公開日 2022-04-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of the DNMT3B ADD domain suggests the absence of a DNMT3A-like autoinhibitory mechanism. Biochem.Biophys.Res.Commun., 619, 2022
6PIF	V. cholerae TniQ-Cascade complex, open conformation 分子名称: Cas7, type I-F CRISPR-associated protein, TniQ monomer 1, ... 著者 Halpin-Healy, T, Klompe, S, Sternberg, S.H. 登録日 2019-06-26 公開日 2019-10-02 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system. Nature, 577, 2020
5OHN	Crystal structure of USP30 in covalent complex with ubiquitin propargylamide (low resolution) 分子名称: Polyubiquitin-B, Ubiquitin carboxyl-terminal hydrolase 30,Ubiquitin carboxyl-terminal hydrolase 30, ZINC ION 著者 Gersch, M, Komander, D. 登録日 2017-07-17 公開日 2017-09-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Mechanism and regulation of the Lys6-selective deubiquitinase USP30. Nat. Struct. Mol. Biol., 24, 2017
7TFF	Crystal structure of human platelet phosphofructokinase-1 mutant- D564N 分子名称: ATP-dependent 6-phosphofructokinase, platelet type, PHOSPHATE ION, ... 著者 Hansen, H, Webb, B.A, Robart, A.R, Narayanasami, S. 登録日 2022-01-06 公開日 2023-07-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Cancer-associated somatic mutations in human phosphofructokinase-1 reveal a critical electrostatic interaction for allosteric regulation of enzyme activity. Biochem.J., 480, 2023
3P3W	Structure of a dimeric GluA3 N-terminal domain (NTD) at 4.2 A resolution 分子名称: Glutamate receptor 3 著者 Rossmann, M, Sukumaran, M, Greger, I.H. 登録日 2010-10-05 公開日 2011-03-09 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Dynamics and allosteric potential of the AMPA receptor N-terminal domain Embo J., 30, 2011
4QTR	Computational design of co-assembling protein-DNA nanowires 分子名称: DNA (5'-D(P*CP*GP*GP*AP*AP*AP*TP*TP*AP*AP*AP*TP*TP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*GP*TP*AP*AP*TP*TP*TP*AP*AP*TP*TP*TP*CP*C)-3'), dualENH 著者 Mou, Y, Mayo, S.L. 登録日 2014-07-08 公開日 2015-07-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Computational design of co-assembling protein-DNA nanowires. Nature, 525, 2015
5OMM	GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-14 分子名称: 1,2-ETHANEDIOL, Capsid protein, Nanobody (VHH) Nano-14 著者 Koromyslova, A.D, Hansman, G.S. 登録日 2017-08-01 公開日 2017-10-04 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Nanobodies targeting norovirus capsid reveal functional epitopes and potential mechanisms of neutralization. PLoS Pathog., 13, 2017
3P61	Crystal structure of the mutant R160A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-monophosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2010-10-11 公開日 2011-09-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.396 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
4R08	Crystal structure of human TLR8 in complex with ssRNA40 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3'-O-[(R)-{[(2R,3aR,4R,6R,6aR)-6-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-hydroxy-2-oxidotetrahydrofuro[3,4-d][1,3,2]dioxaphosphol-4-yl]methoxy}(hydroxy)phosphoryl]uridine 5'-(dihydrogen phosphate), ... 著者 Tanji, H, Ohto, U, Shimizu, T. 登録日 2014-07-30 公開日 2015-01-14 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Toll-like receptor 8 senses degradation products of single-stranded RNA. Nat.Struct.Mol.Biol., 22, 2015
6PD4	Crystal Structure of Hendra Virus Attachment G Glycoprotein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Attachment glycoprotein, ... 著者 Xu, K, Nikolov, D.B. 登録日 2019-06-18 公開日 2019-11-27 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 New insights into the Hendra virus attachment and entry process from structures of the virus G glycoprotein and its complex with Ephrin-B2. PLoS ONE, 7, 2012
4QUZ	Crystal structure of Feline Norovirus P Domain 分子名称: 1,2-ETHANEDIOL, VP1 著者 Singh, B.K, Hansman, G.S. 登録日 2014-07-14 公開日 2014-11-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural analysis of a feline norovirus protruding domain. Virology, 474, 2015
4QVA	Unliganded crystal structure of Feline Norovirus P Domain co-crystallized with N-glycolylneuraminic acid 分子名称: VP1 著者 Singh, B.K, Hansman, G.S. 登録日 2014-07-14 公開日 2014-11-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Structural analysis of a feline norovirus protruding domain. Virology, 474, 2015
3P5Z	Crystal structure of the mutant T159S of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, N-PROPANOL, ... 著者 Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C. 登録日 2010-10-11 公開日 2011-09-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
6POE	Structure of ACLY in complex with CoA 分子名称: ATP-citrate synthase, COENZYME A 著者 Wei, X, Marmorstein, R. 登録日 2019-07-03 公開日 2019-12-25 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Molecular basis for acetyl-CoA production by ATP-citrate lyase. Nat.Struct.Mol.Biol., 27, 2020
6Y4M	Structure of Tubulin Tyrosine Ligase in Complex with Tb111 分子名称: (2~{R})-1-methylpiperidine-2-carboxylic acid, (2~{S},4~{R})-4-azanyl-2-methyl-5-phenyl-pentanoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ... 著者 Gavrilyuk, J, Nocek, B, Rigol, S, Nicolaou, K.C, Stoll, V. 登録日 2020-02-21 公開日 2021-03-31 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 Design, Synthesis, and Biological Evaluation of Tubulysin Analogues, Linker-Drugs, and Antibody-Drug Conjugates, Insights into Structure-Activity Relationships, and Tubulysin-Tubulin Binding Derived from X-ray Crystallographic Analysis. J.Org.Chem., 86, 2021
3SJ3	Crystal structure of the mutant R160A.Y206F of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP 分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase 著者 Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C. 登録日 2011-06-20 公開日 2011-06-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.26 Å) 主引用文献 Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Biochemistry, 51, 2012
7QH7	Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4 分子名称: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ... 著者 Rebelo-Guiomar, P, Pellegrino, S, Dent, K.C, Warren, A.J, Minczuk, M. 登録日 2021-12-10 公開日 2022-05-18 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 A late-stage assembly checkpoint of the human mitochondrial ribosome large subunit. Nat Commun, 13, 2022
5OW6	CryoEM structure of recombinant CMV particles with Tetanus-epitope 分子名称: Capsid protein, VP2, VP3, ... 著者 Kotecha, A, Stuart, D.I, Backmann, M. 登録日 2017-08-30 公開日 2017-09-13 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Incorporation of tetanus-epitope into virus-like particles achieves vaccine responses even in older recipients in models of psoriasis, Alzheimer's and cat allergy. NPJ Vaccines, 2, 2017
1PI6	YEAST ACTIN INTERACTING PROTEIN 1 (Aip1), ORTHORHOMBIC CRYSTAL FORM 分子名称: Actin interacting protein 1, ZINC ION 著者 Voegtli, W.C, Madrona, A.Y, Wilson, D.K. 登録日 2003-05-29 公開日 2003-07-15 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The structure of Aip1p, a WD repeat protein that regulates Cofilin-mediated actin depolymerization. J.Biol.Chem., 278, 2003

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