Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2M8P
DownloadVisualize
BU of 2m8p by Molmil
The structure of the W184AM185A mutant of the HIV-1 capsid protein
分子名称: Capsid protein p24
著者Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
登録日2013-05-24
公開日2013-11-20
最終更新日2023-06-14
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
4NO9
DownloadVisualize
BU of 4no9 by Molmil
yCP in complex with Z-Leu-Leu-Leu-epoxyketone
分子名称: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-L-leucinamide, N-[(benzyloxy)carbonyl]-L-leucyl-N-{(1R,2S)-1-hydroxy-4-methyl-1-[(2R)-2-methyloxiran-2-yl]pentan-2-yl}-L-leucinamide, ...
著者Stein, M.L, Cui, H, Beck, P, Dubiella, C, Voss, C, Krueger, A, Schmidt, B, Groll, M.
登録日2013-11-19
公開日2014-02-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Systematic Comparison of Peptidic Proteasome Inhibitors Highlights the alpha-Ketoamide Electrophile as an Auspicious Reversible Lead Motif.
Angew.Chem.Int.Ed.Engl., 53, 2014
2LXZ
DownloadVisualize
BU of 2lxz by Molmil
Solution Structure of the Antimicrobial Peptide Human Defensin 5
分子名称: Defensin-5
著者Wommack, A.J, Robson, S.A, Wanniarahchi, Y.A, Wan, A, Turner, C.J, Nolan, E.M.
登録日2012-09-10
公開日2012-11-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NMR solution structure and condition-dependent oligomerization of the antimicrobial Peptide human defensin 5.
Biochemistry, 51, 2012
2LXD
DownloadVisualize
BU of 2lxd by Molmil
Backbone 1H, 13C, and 15N Chemical Shift Assignments for LMO2(LIM2)-Ldb1(LID)
分子名称: Rhombotin-2,LIM domain-binding protein 1, ZINC ION
著者Dastmalchi, S, Wilkinson-White, L, Kwan, A.H, Gamsjaeger, R, Mackay, J.P, Matthews, J.M.
登録日2012-08-20
公開日2012-09-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a tethered Lmo2(LIM2) /Ldb1(LID) complex.
Protein Sci., 21, 2012
6OH9
DownloadVisualize
BU of 6oh9 by Molmil
Yeast Guanine Deaminase
分子名称: NONAETHYLENE GLYCOL, SULFATE ION, Yeast Guanine Deaminase, ...
著者Shek, R.S, French, J.B.
登録日2019-04-05
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Determinants for Substrate Selectivity in Guanine Deaminase Enzymes of the Amidohydrolase Superfamily.
Biochemistry, 58, 2019
2M8N
DownloadVisualize
BU of 2m8n by Molmil
HIV-1 capsid monomer structure
分子名称: Capsid protein p24
著者Deshmukh, L, Schwieters, C.D, Grishaev, A, Clore, G, Ghirlando, R.
登録日2013-05-24
公開日2013-11-20
最終更新日2023-06-14
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Structure and Dynamics of Full-Length HIV-1 Capsid Protein in Solution.
J.Am.Chem.Soc., 135, 2013
6OQV
DownloadVisualize
BU of 6oqv by Molmil
E. coli ATP Synthase State 2b
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Stewart, A.G, Sobti, M, Walshe, J.L.
登録日2019-04-29
公開日2020-06-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
6OMB
DownloadVisualize
BU of 6omb by Molmil
Cdc48 Hexamer (Subunits A to E) with substrate bound to the central pore
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Cell division control protein 48, ...
著者Cooney, I, Han, H, Stewart, M, Carson, R.H, Hansen, D, Price, J.C, Hill, C.P, Shen, P.S.
登録日2019-04-18
公開日2019-07-17
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the Cdc48 segregase in the act of unfolding an authentic substrate.
Science, 365, 2019
4O4P
DownloadVisualize
BU of 4o4p by Molmil
Structure of P450 BM3 A82F F87V in complex with S-omeprazol
分子名称: 6-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole, Bifunctional P-450/NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE
著者Leys, D.
登録日2013-12-19
公開日2014-01-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Human P450-like oxidation of diverse proton pump inhibitor drugs by 'gatekeeper' mutants of flavocytochrome P450 BM3.
Biochem.J., 460, 2014
2MT8
DownloadVisualize
BU of 2mt8 by Molmil
Solution structure MTAbl13, a grafted MCoTI-II
分子名称: MTAbl13 of grafted MCoTI-II
著者Huang, Y, Wang, C, Craik, D.
登録日2014-08-15
公開日2015-10-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Design of substrate-based BCR-ABL kinase inhibitors using the cyclotide scaffold.
Sci Rep, 5, 2015
2MPH
DownloadVisualize
BU of 2mph by Molmil
Solution Structure of human FK506 binding Protein 25
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP3
著者Shin, J, Prakash, A, Yoon, H.
登録日2014-05-18
公開日2015-05-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of nucleic acid recognition by FK506-binding protein 25 (FKBP25), a nuclear immunophilin.
Nucleic Acids Res., 44, 2016
6O9M
DownloadVisualize
BU of 6o9m by Molmil
Structure of the human apo TFIIH
分子名称: CDK-activating kinase assembly factor MAT1, General transcription factor IIH subunit 1, General transcription factor IIH subunit 2, ...
著者Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
登録日2019-03-14
公開日2019-05-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
6OFH
DownloadVisualize
BU of 6ofh by Molmil
Structure of Salmonella type III secretion system needle filament
分子名称: Protein PrgI
著者Guo, E.Z, Galan, J.E.
登録日2019-03-29
公開日2019-07-10
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A polymorphic helix of a Salmonella needle protein relays signals defining distinct steps in type III secretion.
Plos Biol., 17, 2019
6OD3
DownloadVisualize
BU of 6od3 by Molmil
Human TCF4 C-terminal bHLH domain in Complex with 13-bp Oligonucleotide Containing E-box Sequence
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*AP*TP*AP*CP*AP*CP*GP*TP*GP*TP*AP*T)-3'), ...
著者Horton, J.R, Cheng, X, Yang, J.
登録日2019-03-25
公開日2019-05-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.494 Å)
主引用文献Structural basis for preferential binding of human TCF4 to DNA containing 5-carboxylcytosine.
Nucleic Acids Res., 47, 2019
6ODE
DownloadVisualize
BU of 6ode by Molmil
Crystal Structure of Mycobacterium tuberculosis Proteasome in Complex with Phenylimidazole-based Inhibitor B6
分子名称: N-{(2S)-1-({(1S)-1-[5-(2-fluorophenyl)-1H-imidazol-2-yl]ethyl}amino)-1,4-dioxo-4-[(2R)-2-phenylpyrrolidin-1-yl]butan-2-yl}-5-methyl-1,2-oxazole-3-carboxamide, Proteasome subunit alpha, Proteasome subunit beta
著者Hsu, H.C, Li, H.
登録日2019-03-26
公開日2019-10-09
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Selective Phenylimidazole-Based Inhibitors of theMycobacterium tuberculosisProteasome.
J.Med.Chem., 62, 2019
2MWT
DownloadVisualize
BU of 2mwt by Molmil
NMR structure of crotalicidin in DPC micelles
分子名称: Cathelicidin-like peptide
著者Jimenez, M, Zamora-Carreras, H.
登録日2014-11-24
公開日2015-11-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural Dissection of Crotalicidin, a Rattlesnake Venom Cathelicidin, Retrieves a Fragment with Antimicrobial and Antitumor Activity.
J.Med.Chem., 58, 2015
2MVW
DownloadVisualize
BU of 2mvw by Molmil
Solution structure of the TRIM19 B-box1 (B1) of human promyelocytic leukemia (PML)
分子名称: Protein PML, ZINC ION
著者Huang, S, Naik, M.T, Fan, P, Wang, Y, Chang, C, Huang, T.
登録日2014-10-17
公開日2014-11-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The B-box 1 dimer of human promyelocytic leukemia protein.
J.Biomol.Nmr, 60, 2014
2N1W
DownloadVisualize
BU of 2n1w by Molmil
Solution structure of human SUMO2
分子名称: Small ubiquitin-related modifier 2
著者Naik, M.T, Naik, N, Shih, H, Huang, T.
登録日2015-04-24
公開日2016-04-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of human SUMO
To Be Published
6OQR
DownloadVisualize
BU of 6oqr by Molmil
E. coli ATP Synthase ADP State 1a
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Stewart, A.G, Walshe, J.L, Sobti, M.
登録日2019-04-29
公開日2020-06-03
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
4O2X
DownloadVisualize
BU of 4o2x by Molmil
Structure of a malarial protein
分子名称: Maltose-binding periplasmic protein, ATP-dependent Clp protease adaptor protein ClpS containing protein chimeric construct
著者AhYoung, A.P, Koehl, A, Cascio, D, Egea, P.F.
登録日2013-12-17
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of a putative ClpS N-end rule adaptor protein from the malaria pathogen Plasmodium falciparum.
Protein Sci., 25, 2016
4O5I
DownloadVisualize
BU of 4o5i by Molmil
Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/361/2011 (H3N2) influenza hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab F045-092 heavy chain, ...
著者Lee, P.S, Wilson, I.A.
登録日2013-12-19
公開日2014-04-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (6.501 Å)
主引用文献Receptor mimicry by antibody F045-092 facilitates universal binding to the H3 subtype of influenza virus.
Nat Commun, 5, 2014
4OSV
DownloadVisualize
BU of 4osv by Molmil
Crystal structure of the S505M mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
6MZJ
DownloadVisualize
BU of 6mzj by Molmil
Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 426c DS-SOSIP D3, ...
著者Borst, A.J, Weidle, C.E, Gray, M.D, Frenz, B, Snijder, J, Joyce, M.G, Georgiev, I.S, Stewart-Jones, G.B.E, Kwong, P.D, McGuire, A.T, DiMaio, F, Stamatatos, L, Pancera, M, Veesler, D.
登録日2018-11-05
公開日2018-11-14
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer and a glycosylated HIV-1 gp120 core.
Elife, 7, 2018
4OIV
DownloadVisualize
BU of 4oiv by Molmil
Structural basis for small molecule NDB as a selective antagonist of FXR
分子名称: Bile acid receptor, N-benzyl-N-(3-tert-butyl-4-hydroxyphenyl)-2,6-dichloro-4-(dimethylamino)benzamide
著者Xu, X, Chen, L, Hu, L, Shen, X.
登録日2014-01-20
公開日2015-03-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis for Small Molecule NDB (N-Benzyl-N-(3-(tert-butyl)-4-hydroxyphenyl)-2,6-dichloro-4-(dimethylamino) Benzamide) as a Selective Antagonist of Farnesoid X Receptor alpha (FXR alpha ) in Stabilizing the Homodimerization of the Receptor.
J.Biol.Chem., 290, 2015
6NZ7
DownloadVisualize
BU of 6nz7 by Molmil
Crystal structure of broadly neutralizing Influenza A antibody 429 B01 in complex with Hemagglutinin Hong Kong 1968
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 429 B01 FAB heavy chain, 429 B01 FAB light chain, ...
著者Zhou, T, Kwong, P.D.
登録日2019-02-13
公開日2019-05-08
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Prolonged evolution of the memory B cell response induced by a replicating adenovirus-influenza H5 vaccine.
Sci Immunol, 4, 2019

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon