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3IF9
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BU of 3if9 by Molmil
Crystal structure of Glycine Oxidase G51S/A54R/H244A mutant in complex with inhibitor glycolate
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCOLIC ACID, Glycine oxidase
著者Pedotti, M, Rosini, E, Molla, G, Moschetti, T, Vallone, B, Savino, C, Pollegioni, L.
登録日2009-07-24
公開日2009-10-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Glyphosate resistance by engineering the flavoenzyme glycine oxidase.
J.Biol.Chem., 284, 2009
5C1I
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BU of 5c1i by Molmil
m1A58 tRNA methyltransferase mutant - D170A
分子名称: SULFATE ION, tRNA (adenine(58)-N(1))-methyltransferase TrmI
著者Ponchon, L, Degut, C, Folly-Klan, M, Barraud, P, Tisne, C.
登録日2015-06-14
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The m1A58 modification in eubacterial tRNA: An overview of tRNA recognition and mechanism of catalysis by TrmI.
Biophys.Chem., 210, 2016
5YCL
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BU of 5ycl by Molmil
Crystal structure of HigBA complex from Shigella flexneri
分子名称: Antitoxin HigA, mRNA interferase HigB
著者Youn, W.S, Seok, S.H, Seo, M.D.
登録日2017-09-07
公開日2018-09-19
最終更新日2019-09-04
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献Structural changes of antitoxin HigA from Shigella flexneri by binding of its cognate toxin HigB.
Int.J.Biol.Macromol., 130, 2019
7L7F
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BU of 7l7f by Molmil
Cryo-EM structure of human ACE2 receptor bound to protein encoded by vaccine candidate BNT162b1
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein, Envelope glycoprotein fusion
著者Lees, J.A, Han, S.
登録日2020-12-28
公開日2021-02-24
最終更新日2021-04-21
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献BNT162b vaccines protect rhesus macaques from SARS-CoV-2.
Nature, 592, 2021
5C6E
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BU of 5c6e by Molmil
Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state
分子名称: CYANIDE ION, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
著者Dajnowicz, S, Sean, S, Hanson, B.L, Fisher, S.Z, Langan, P, Kovalevsky, A.Y, Mueser, T.C.
登録日2015-06-22
公開日2016-06-22
最終更新日2024-03-06
実験手法NEUTRON DIFFRACTION (1.7 Å), X-RAY DIFFRACTION
主引用文献Visualizing the Bohr effect in hemoglobin: neutron structure of equine cyanomethemoglobin in the R state and comparison with human deoxyhemoglobin in the T state.
Acta Crystallogr D Struct Biol, 72, 2016
5U66
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BU of 5u66 by Molmil
Modified single helix from the B-domain of protein A bound to IgG1 Fc
分子名称: IgG1 fc derived from CD4-fc fusion, STAPLED PEPTIDE FROM DOMAIN B OF PROTEIN A, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Ultsch, M.H, Eigenbrot, C.
登録日2016-12-07
公開日2017-05-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献3-2-1: Structural insights from stepwise shrinkage of a three-helix Fc-binding domain to a single helix.
Protein Eng. Des. Sel., 30, 2017
5TOW
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BU of 5tow by Molmil
Crystal structure of the inactive form of S-adenosyl-L-homocysteine hydrolase from Thermotoga maritima in ternary complex with NADH and Adenosine
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ADENOSINE, ...
著者Czyrko, J, Brzezinski, K.
登録日2016-10-19
公開日2017-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献S-adenosyl-L-homocysteine hydrolase from a hyperthermophile (Thermotoga maritima) is expressed in Escherichia coli in inactive form - Biochemical and structural studies.
Int. J. Biol. Macromol., 104, 2017
5XY4
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BU of 5xy4 by Molmil
CATPO mutant - V536W
分子名称: CALCIUM ION, CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE, Catalase, ...
著者Yuzugullu Karakus, Y, Goc, G, Balci, S, Pearson, A.R, Yorke, B.
登録日2017-07-06
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Identification of the site of oxidase substrate binding in Scytalidium thermophilum catalase.
Acta Crystallogr D Struct Biol, 74, 2018
5U4Y
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BU of 5u4y by Molmil
IgG Fc bound to 3 helix of the B-domain from Protein A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG1 fc, Immunoglobulin G-binding protein A, ...
著者Ultsch, M.H, Eigenbrot, C.
登録日2016-12-06
公開日2017-05-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4994 Å)
主引用文献3-2-1: Structural insights from stepwise shrinkage of a three-helix Fc-binding domain to a single helix.
Protein Eng. Des. Sel., 30, 2017
7L7I
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BU of 7l7i by Molmil
Cryo-EM structure of Hsp90:FKBP51:p23 closed-state complex
分子名称: Heat shock protein HSP 90-alpha, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Peptidyl-prolyl cis-trans isomerase FKBP5, ...
著者Lee, K, Thwin, A.C, Tse, E, Gates, S.N, Southworth, D.R.
登録日2020-12-28
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The structure of an Hsp90-immunophilin complex reveals cochaperone recognition of the client maturation state.
Mol.Cell, 81, 2021
6CVN
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BU of 6cvn by Molmil
Model of synthetic tau (R2x4) bound to the microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Nogales, E, Kellogg, E.H.
登録日2018-03-28
公開日2018-05-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Near-atomic model of microtubule-tau interactions.
Science, 360, 2018
2MS6
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BU of 2ms6 by Molmil
Human Telomeric G-quadruplex DNA sequence (TTAGGGT)4 complexed with Flavonoid Quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, DNA_(5'-D(*TP*TP*AP*GP*GP*GP*T)-3')
著者Kumar, A, Tawani, A.
登録日2014-07-24
公開日2015-01-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Insight into the interaction of Flavonoids with Human Telomeric Sequence
Sci Rep, 5, 2015
5C0O
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BU of 5c0o by Molmil
m1A58 tRNA methyltransferase mutant - Y78A
分子名称: S-ADENOSYLMETHIONINE, SULFATE ION, tRNA (adenine(58)-N(1))-methyltransferase TrmI
著者Degut, C, Ponchon, L, Folly-Klan, M, Barraud, P, Tisne, C.
登録日2015-06-12
公開日2015-07-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献The m1A58 modification in eubacterial tRNA: An overview of tRNA recognition and mechanism of catalysis by TrmI.
Biophys.Chem., 210, 2016
6C62
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BU of 6c62 by Molmil
An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme.
分子名称: AtzG, Biuret hydrolase, MAGNESIUM ION
著者Peat, T.S, Esquirol, L, Wilding, M, Liu, J.W, French, N.G, Hartley, C.J, Hideki, O, Easton, C.J, Newman, J, Scott, C.
登録日2018-01-17
公開日2018-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献An unexpected vestigial protein complex reveals the evolutionary origins of ans-triazine catabolic enzyme.
J. Biol. Chem., 293, 2018
6C6G
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BU of 6c6g by Molmil
An unexpected vestigial protein complex reveals the evolutionary origins of an s-triazine catabolic enzyme. Inhibitor bound complex.
分子名称: AtzG, Biuret hydrolase, CALCIUM ION
著者Peat, T.S, Esquirol, L, Wilding, M, Liu, J.W, French, N.G, Hartley, C.J, Hideki, O, Easton, C.J, Newman, J, Scott, C.
登録日2018-01-18
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An unexpected vestigial protein complex reveals the evolutionary origins of ans-triazine catabolic enzyme.
J. Biol. Chem., 293, 2018
7FIO
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BU of 7fio by Molmil
LecA from Pseudomonas aeruginosa in complex with a synthetic monovalent galactosidic inhibitor
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, N-[2-[4-[(2S)-3-(2-hydroxyethylamino)-3-oxidanylidene-2-(2-phenoxyethanoylamino)propyl]-1,2,3-triazol-1-yl]ethyl]-4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-benzamide, ...
著者Kuhaudomlarp, S, Siebs, E, da Silva Figueiredo Celestino Gomes, P, Fortin, C, Rognan, D, Rademacher, C, Imberty, A, Titz, A.
登録日2021-07-31
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Targeting the Central Pocket of the Pseudomonas aeruginosa Lectin LecA.
Chembiochem, 23, 2022
6YN4
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BU of 6yn4 by Molmil
Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitintetraose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Jimenez-Ortega, E, Sanz-Aparicio, J.
登録日2020-04-10
公開日2021-10-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism
Comput Struct Biotechnol J, 19, 2021
5YH2
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BU of 5yh2 by Molmil
The structure of DrFam20C1 and hFam20A complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Family with sequence similarity 20, member Ca, ...
著者Zhang, H, Xiao, J.
登録日2017-09-27
公開日2018-04-11
最終更新日2018-04-25
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Structure and evolution of the Fam20 kinases
Nat Commun, 9, 2018
7EQC
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BU of 7eqc by Molmil
Crystal structure of the mini-centralspindlin complex
分子名称: CYtoKinesis defect, Kinesin-like protein
著者Chen, Z, Pan, H.
登録日2021-05-01
公開日2022-04-13
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanistic insights into central spindle assembly mediated by the centralspindlin complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
3WYQ
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BU of 3wyq by Molmil
Crystal structure of the low-immunogenic core streptavidin mutant LISA-314 (Y22S/Y83S/R84K/E101D/R103K/E116N) at 1.0 A resolution
分子名称: BIOTIN, GLYCEROL, SULFATE ION, ...
著者Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A.
登録日2014-09-05
公開日2014-12-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal structure of streptavidin mutant with low immunogenicity.
J.Biosci.Bioeng., 119, 2015
6CVJ
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BU of 6cvj by Molmil
Model of synthetic tau (four tandem repeats of first repeat sequence) bound to the microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Nogales, E, Kellogg, E.H.
登録日2018-03-28
公開日2018-05-23
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Near-atomic model of microtubule-tau interactions.
Science, 360, 2018
3WYP
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BU of 3wyp by Molmil
Crystal structure of wild-type core streptavidin in complex with D-biotin/biotin-D-sulfoxide at 1.3 A resolution
分子名称: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
著者Kawato, T, Mizohata, E, Meshizuka, T, Doi, H, Kawamura, T, Matsumura, H, Yumura, K, Tsumoto, K, Kodama, T, Inoue, T, Sugiyama, A.
登録日2014-09-05
公開日2014-12-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of streptavidin mutant with low immunogenicity.
J.Biosci.Bioeng., 119, 2015
5SV7
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BU of 5sv7 by Molmil
The Crystal structure of a chaperone
分子名称: Eukaryotic translation initiation factor 2-alpha kinase 3
著者Wang, P, Li, J, Sha, B.
登録日2016-08-04
公開日2017-03-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.209 Å)
主引用文献The ER stress sensor PERK luminal domain functions as a molecular chaperone to interact with misfolded proteins.
Acta Crystallogr D Struct Biol, 72, 2016
3XIS
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BU of 3xis by Molmil
A METAL-MEDIATED HYDRIDE SHIFT MECHANISM FOR XYLOSE ISOMERASE BASED ON THE 1.6 ANGSTROMS STREPTOMYCES RUBIGINOSUS STRUCTURES WITH XYLITOL AND D-XYLOSE
分子名称: D-xylose, MAGNESIUM ION, XYLOSE ISOMERASE, ...
著者Whitlow, M, Howard, A.J.
登録日1991-03-25
公開日1992-07-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose.
Proteins, 9, 1991
5C71
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BU of 5c71 by Molmil
The structure of Aspergillus oryzae a-glucuronidase complexed with glycyrrhetinic acid monoglucuronide
分子名称: (3BETA,5BETA,14BETA)-3-HYDROXY-11-OXOOLEAN-12-EN-29-OIC ACID, Glucuronidase, alpha-D-glucopyranuronic acid
著者Sun, H.L, Lv, B, Huang, S, Li, C, Jiang, T.
登録日2015-06-24
公開日2016-06-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structure-guided engineering of the substrate specificity of a fungal beta-glucuronidase toward triterpenoid saponins.
J.Biol.Chem., 293, 2018

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