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7X7N
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3D model of the 3-RBD up single trimeric spike protein of SARS-CoV2 in the presence of synthetic peptide SIH-5.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, Synthetic peptide SIH-5
著者Khatri, B, Pramanick, I, Malladi, S.K, Rajmani, R.S, Kumar, S, Ghosh, P, Sengupta, N, Rahisuddin, R, Kumaran, S, Ringe, R.P, Varadarajan, R, Dutta, S, Chatterjee, J.
登録日2022-03-10
公開日2022-04-27
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (4.47 Å)
主引用文献A dimeric proteomimetic prevents SARS-CoV-2 infection by dimerizing the spike protein.
Nat.Chem.Biol., 18, 2022
3R0J
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Structure of PhoP from Mycobacterium tuberculosis
分子名称: POSSIBLE TWO COMPONENT SYSTEM RESPONSE TRANSCRIPTIONAL POSITIVE REGULATOR PHOP, R-1,2-PROPANEDIOL, SULFATE ION
著者Menon, S, Wang, S.
登録日2011-03-08
公開日2011-07-13
最終更新日2014-10-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Response Regulator PhoP from Mycobacterium tuberculosis Reveals a Dimer through the Receiver Domain.
Biochemistry, 50, 2011
7KX0
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Crystal structure of the CD27:CD70 co-stimulatory complex
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CD27 antigen, ...
著者Maben, Z, Liu, W, Mosyak, L, Chaparro-Riggers, J.
登録日2020-12-02
公開日2021-09-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Structural delineation and phase-dependent activation of the costimulatory CD27:CD70 complex.
J.Biol.Chem., 297, 2021
6T6I
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Crystal Structure of the C-terminal domain of the HIV-1 Integrase (subtype A2)
分子名称: NICKEL (II) ION, Pol protein
著者Ruff, M, Negroni, M.
登録日2019-10-18
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.203 Å)
主引用文献NKNK: a New Essential Motif in the C-Terminal Domain of HIV-1 Group M Integrases.
J.Virol., 94, 2020
5GSY
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BU of 5gsy by Molmil
Kinesin-8 motor, KIF19A, in the nucleotide-free state complexed with GDP-taxol microtubule
分子名称: Kinesin-like protein KIF19
著者Morikawa, M, Nitta, R, Yajima, H, Shigematsu, H, Kikkawa, M, Hirokawa, N.
登録日2016-08-17
公開日2016-09-28
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Motility and microtubule depolymerization mechanisms of the Kinesin-8 motor, KIF19A
Elife, 5, 2016
5GTP
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The agonist-free structure of human PPARgamma ligand binding domain in the presence of the SRC-1 coactivator peptide
分子名称: GLYCEROL, MYRISTIC ACID, Nuclear receptor coactivator 1, ...
著者Jang, J.Y, Suh, S.W.
登録日2016-08-23
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site.
Biochim. Biophys. Acta, 1865, 2017
5GTX
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Crystal structure of mutated buckwheat glutaredoxin
分子名称: buckwheat glutaredoxin
著者Zhang, X, Wang, W, Zhao, Y, Wang, Z, Wang, H.
登録日2016-08-23
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural insights into the binding of buckwheat glutaredoxin with GSH and regulation of its catalytic activity
J. Inorg. Biochem., 173, 2017
4Y6C
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Q17M crystal structure of Podosopora anserina putative kinesin light chain nearly identical TPR-like repeats
分子名称: ANSERINA PUTATIVE KINESIN LIGHT chain, SULFATE ION
著者Marold, J.D, Kavran, J.M, Bowman, G.D, Barrick, D.
登録日2015-02-12
公開日2015-10-07
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.772 Å)
主引用文献A Naturally Occurring Repeat Protein with High Internal Sequence Identity Defines a New Class of TPR-like Proteins.
Structure, 23, 2015
4Y8V
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Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with ADP and additional ADP bound to phosphate binding site
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, alpha subunit of acetyl-CoA synthetase (NDP forming), ...
著者Weisse, R.H.-J, Scheidig, A.J.
登録日2015-02-16
公開日2016-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.099 Å)
主引用文献Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
7KLL
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Human Arginase1 Complexed with Inhibitor Compound 18
分子名称: 3-[(2~{S},3~{R},4~{R})-4-azanyl-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, Arginase-1, MANGANESE (II) ION
著者Palte, R.L.
登録日2020-10-30
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
7KLM
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Human Arginase1 Complexed with Inhibitor Compound 24a
分子名称: 3-[(2~{S},3~{R},4~{R})-4-[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron, Arginase-1, MANGANESE (II) ION
著者Palte, R.L.
登録日2020-10-30
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
7KLK
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Human Arginase1 Complexed with Inhibitor Compound 3a
分子名称: 1,2-ETHANEDIOL, 3-[(2~{S},3~{R})-2-carboxypiperidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boranuide, Arginase-1, ...
著者Palte, R.L.
登録日2020-10-30
公開日2021-09-29
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structure-Based Discovery of Proline-Derived Arginase Inhibitors with Improved Oral Bioavailability for Immuno-Oncology.
Acs Med.Chem.Lett., 12, 2021
6TJ0
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BU of 6tj0 by Molmil
Crystal structure of the bacterial cellulose secretion regulator BcsE, residues 217-523, with bound c-di-GMP.
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Bacterial cellulose synthesis subunit E, GLYCEROL
著者Zouhir, S, Abidi, W, Krasteva, P.V.
登録日2019-11-23
公開日2020-07-29
最終更新日2020-08-26
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Multitasking of the c-di-GMP-Sensing Cellulose Secretion Regulator BcsE.
Mbio, 11, 2020
5G1V
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BU of 5g1v by Molmil
Linalool Dehydratase Isomerase: Selenomethionine Derivative
分子名称: LINALOOL DEHYDRATASE ISOMERASE
著者Chambers, S, Hau, A, Man, H, Omar, M, Turkenburg, J.P, Grogan, G.
登録日2016-03-30
公開日2017-01-11
最終更新日2017-02-22
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural and functional insights into asymmetric enzymatic dehydration of alkenols.
Nat. Chem. Biol., 13, 2017
4CUM
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BU of 4cum by Molmil
Structure of bovine endothelial nitric oxide synthase heme domain in complex with (9aS)-2-amino-9a-methyl-6,7,8,9,9a,10-hexahydrobenzo[g]pteridin-4(3H)-one
分子名称: (9aS)-2-amino-9a-methyl-6,7,8,9,9a,10-hexahydrobenzo[g]pteridin-4(3H)-one, ACETATE ION, ARGININE, ...
著者Chreifi, G, Li, H, Poulos, T.L.
登録日2014-03-20
公開日2014-05-28
最終更新日2014-07-16
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Communication between the Zinc and Tetrahydrobiopterin Binding Sites in Nitric Oxide Synthase.
Biochemistry, 53, 2014
7L5M
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Crystal Structure of the DiB-RM-split Protein
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lipocalin family protein, SODIUM ION, ...
著者Bozhanova, N.G, Harp, J.M, Meiler, J.
登録日2020-12-22
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Computational redesign of a fluorogen activating protein with Rosetta.
Plos Comput.Biol., 17, 2021
7L5L
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Crystal structure of the DiB-RM protein
分子名称: Lipocalin family protein, SULFATE ION
著者Bozhanova, N.G, Harp, J.M, Meiler, J.
登録日2020-12-22
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Computational redesign of a fluorogen activating protein with Rosetta.
Plos Comput.Biol., 17, 2021
6TM2
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Human MUC2 AAs 21-1397
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Javitt, G, Khmelnitsky, L, Albert, L, Elad, N, Ilani, T, Diskin, R, Fass, D.
登録日2019-12-03
公開日2020-10-21
最終更新日2020-11-11
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Assembly Mechanism of Mucin and von Willebrand Factor Polymers.
Cell, 183, 2020
5GAM
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BU of 5gam by Molmil
Foot region of the yeast spliceosomal U4/U6.U5 tri-snRNP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Pre-mRNA-splicing factor 8, Pre-mRNA-splicing factor SNU114, ...
著者Nguyen, T.H.D, Galej, W.P, Bai, X.C, Oubridge, C, Scheres, S.H.W, Newman, A.J, Nagai, K.
登録日2015-12-15
公開日2016-02-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 Angstrom resolution
Nature, 530, 2016
7L5K
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Crystal structure of the DiB-RM protein
分子名称: DODECYL-BETA-D-MALTOSIDE, ISOPROPYL ALCOHOL, Lipocalin family protein, ...
著者Bozhanova, N.G, Harp, J.M, Meiler, J.
登録日2020-12-22
公開日2021-10-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Computational redesign of a fluorogen activating protein with Rosetta.
Plos Comput.Biol., 17, 2021
3PB0
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BU of 3pb0 by Molmil
Characterisation of the first monomeric dihydrodipicolinate synthase variant reveals evolutionary insights
分子名称: Dihydrodipicolinate synthase, SULFATE ION
著者Pearce, F.G, Dobson, R.C.J, Jameson, G.B.
登録日2010-10-19
公開日2011-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of monomeric dihydrodipicolinate synthase variant reveals the importance of substrate binding in optimizing oligomerization.
Biochim.Biophys.Acta, 1814, 2011
6T1Z
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LmrP from L. lactis, in an outward-open conformation, bound to Hoechst 33342
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHATE, 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DODECYL-ALPHA-D-MALTOSIDE, ...
著者Hutchin, A, Debruycker, V, Masureel, M, Legrand, P, Remaut, H, Govaerts, C.
登録日2019-10-07
公開日2020-07-29
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献An embedded lipid in the multidrug transporter LmrP suggests a mechanism for polyspecificity.
Nat.Struct.Mol.Biol., 27, 2020
4CUL
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BU of 4cul by Molmil
Structure of bovine endothelial nitric oxide synthase heme domain in complex with 6-acetyl-2-amino-7,7-dimethyl-7,8-dihydropteridin-4(3H)-one
分子名称: 6-acetyl-2-amino-7,7-dimethyl-7,8-dihydropteridin-4(3H)-one, ACETATE ION, ARGININE, ...
著者Chreifi, G, Li, H, Poulos, T.L.
登録日2014-03-20
公開日2014-05-28
最終更新日2014-07-16
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Communication between the Zinc and Tetrahydrobiopterin Binding Sites in Nitric Oxide Synthase.
Biochemistry, 53, 2014
2W4I
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Crystal structure of Helicobacter pylori glutamate racemase in complex with D-Glutamate and an inhibitor
分子名称: 1-[(3S)-5-PHENYL-3-THIOPHEN-2-YL-3H-1,4-BENZODIAZEPIN-2-YL]AZETIDIN-3-OL, D-GLUTAMIC ACID, GLUTAMATE RACEMASE
著者Lundqvist, T.
登録日2008-11-25
公開日2008-12-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Potent and selective inhibitors of Helicobacter pylori glutamate racemase (MurI): pyridodiazepine amines.
Bioorg. Med. Chem. Lett., 19, 2009
7BFZ
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X-ray structure of human prostate-specific membrane antigen(PSMA) in complex with a inhibitor Glu-490
分子名称: (((S)-1-carboxy-5-((E)-2-cyano-3-(5-(1-(3-methoxy-3-oxopropyl)-1,2,3,4-tetrahydroquinolin-6-yl)thiophen-2-yl)acrylamido)pentyl)carbamoyl)-L-glutamic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rakhimbekova, A, Motlova, L, Barinka, C.
登録日2021-01-05
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献A prostate-specific membrane antigen activated molecular rotor for real-time fluorescence imaging.
Nat Commun, 12, 2021

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