PDB: 31311 件ウェブページステータス検索Chemie searchBIRD

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8VVO	Structure of FabS1CE2-EPR1-1 in complex with the erythropoietin receptor 分子名称: CHLORIDE ION, Erythropoietin receptor, S1CE2 VARIANT OF FAB-EPR-1 heavy chain, ... 著者 Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S. 登録日 2024-01-31 公開日 2024-07-10 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones. Protein Sci., 33, 2024
8S3X	LIM Domain Kinase 2 (LIMK2) bound to compound 52 分子名称: 4-(5-cyclopropyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-~{N}-[3-(3-methoxyphenyl)phenyl]-3,6-dihydro-2~{H}-pyridine-1-carboxamide, LIM domain kinase 2 著者 Mathea, S, Chatterjee, D, Preuss, F, Ple, K, Knapp, S. 登録日 2024-02-20 公開日 2024-03-06 最終更新日 2024-09-18 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Tetrahydropyridine LIMK inhibitors: Structure activity studies and biological characterization. Eur.J.Med.Chem., 271, 2024
6NNP	Xanthomonas citri Dephospho-PGM in complex with glucose-6-phosphate 分子名称: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Stiers, K.M, Beamer, L.J. 登録日 2019-01-15 公開日 2019-04-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural and dynamical description of the enzymatic reaction of a phosphohexomutase. Struct Dyn., 6, 2019
7O0S	Crystal structure of the N-terminal domain of CEP164(1-109) bound to camelid nanobody 36Z 分子名称: Centrosomal protein of 164 kDa, Nanobody 36Z 著者 e Silva, I.R, van Breugel, M. 登録日 2021-03-26 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
5FFJ	Structure of a nuclease-deletion mutant of the Type ISP restriction-modification enzyme LlaGI in complex with a DNA substrate mimic 分子名称: DNA (5'-D(P*TP*AP*GP*CP*TP*AP*AP*TP*AP*GP*AP*CP*TP*GP*GP*AP*TP*GP*GP*AP*GP*G)-3'), DNA (5'-D(P*TP*CP*CP*TP*CP*CP*AP*TP*CP*CP*AP*GP*TP*CP*TP*AP*TP*TP*AP*GP*CP*T)-3'), Endonuclease and methylase LlaGI 著者 Saikrishnan, K, Kulkarni, M, Nirwan, N. 登録日 2015-12-18 公開日 2016-03-30 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Structural insights into DNA sequence recognition by Type ISP restriction-modification enzymes Nucleic Acids Res., 44, 2016
8PJA	FKBP51FK1 F67E/K58 (i, i+9) in complex with SAFit1 分子名称: 2-[3-[(1~{R})-1-[(2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidin-2-yl]carbonyloxy-3-(3,4-dimethoxyphenyl)propyl]phenoxy]ethanoic acid, Peptidyl-prolyl cis-trans isomerase FKBP5 著者 Meyners, C, Charalampidou, A, Hausch, F. 登録日 2023-06-23 公開日 2024-03-06 最終更新日 2024-04-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Automated Flow Peptide Synthesis Enables Engineering of Proteins with Stabilized Transient Binding Pockets. Acs Cent.Sci., 10, 2024
5VFX	Structure of an accessory protein of the pCW3 relaxosome in complex with the origin of transfer (oriT) DNA 分子名称: TcpK, oriT 著者 Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C. 登録日 2017-04-10 公開日 2018-04-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3. Nat Commun, 9, 2018
8VU1	Structure of FabS1CE3-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor (trigonal form) 分子名称: S1CE3 VARIANT OF FAB-EPR-1 heavy chain, S1CE3 VARIANT OF FAB-EPR-1 light chain 著者 Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S. 登録日 2024-01-27 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (3.08 Å) 主引用文献 Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones. Protein Sci., 33, 2024
8R1V	Pseudomonas aeruginosa FabF C164A in complex with N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1H-pyrazol-4-yl)-2-(4-methoxyphenoxy)acetamide 分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, DIMETHYL SULFOXIDE, FORMIC ACID, ... 著者 Yadrykhinsky, V, Brenk, R. 登録日 2023-11-02 公開日 2024-03-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.087 Å) 主引用文献 Design, quality and validation of the EU-OPENSCREEN fragment library poised to a high-throughput screening collection. Rsc Med Chem, 15, 2024
8A5M	TRIM7 PRYSPRY in complex with a MNV1-NS6 peptide LEALEFQ 分子名称: E3 ubiquitin-protein ligase TRIM7, MNV1-NS6 peptide LEALEFQ, PHOSPHATE ION 著者 Luptak, J. 登録日 2022-06-15 公開日 2022-07-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.918 Å) 主引用文献 TRIM7 Restricts Coxsackievirus and Norovirus Infection by Detecting the C-Terminal Glutamine Generated by 3C Protease Processing. Viruses, 14, 2022
7Q9Q	Crystal structure of PDE6D Geranylgeranylated cystein complex 分子名称: 1,2-ETHANEDIOL, GERAN-8-YL GERAN, O-METHYLCYSTEINE, ... 著者 Yelland, T, Ismail, S. 登録日 2021-11-14 公開日 2022-01-19 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Stabilization of the RAS:PDE6D Complex Is a Novel Strategy to Inhibit RAS Signaling. J.Med.Chem., 65, 2022
8W0O	GDH-105 crystal structure 分子名称: CHLORIDE ION, Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Peat, T.S, Newman, J. 登録日 2024-02-13 公開日 2024-07-24 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Enhancing the Imine Reductase Activity of a Promiscuous Glucose Dehydrogenase for Scalable Manufacturing of a Chiral Neprilysin Inhibitor Precursor Acs Catalysis, 14, 2024
5D7N	Crystal structure of human Sirt3 at an improved resolution 分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, MAGNESIUM ION, ... 著者 Rumpf, T, Gerhardt, S, Einsle, O, Jung, M. 登録日 2015-08-14 公開日 2015-12-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Seeding for sirtuins: microseed matrix seeding to obtain crystals of human Sirt3 and Sirt2 suitable for soaking. Acta Crystallogr.,Sect.F, 71, 2015
7O2D	Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with 2-(N-morpholino) ethanesulfonic acid (MES) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, ... 著者 Rotilio, L, Mattevi, A. 登録日 2021-03-30 公開日 2021-09-15 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 Structural and biochemical studies enlighten the unspecific peroxygenase from Hypoxylon sp. EC38 as an efficient oxidative biocatalyst. Acs Catalysis, 11, 2021
5FGS	Crystal structure of C-terminal domain of shaft pilin spaA from Lactobacillus rhamnosus GG - P21212 space group 分子名称: Cell surface protein SpaA, ZINC ION 著者 Chaurasia, P, Pratap, S, von Ossowski, I, Palva, A, Krishnan, V. 登録日 2015-12-21 公開日 2016-07-20 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 New insights about pilus formation in gut-adapted Lactobacillus rhamnosus GG from the crystal structure of the SpaA backbone-pilin subunit Sci Rep, 6, 2016
6NG5	Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with (R)-6-(3-fluoro-5-(2-(1-methylpyrrolidin-2-yl)ethyl)phenethyl)-4-methylpyridin-2-amine 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, 6-[2-(3-fluoro-5-{2-[(2R)-1-methylpyrrolidin-2-yl]ethyl}phenyl)ethyl]-4-methylpyridin-2-amine, GLYCEROL, ... 著者 Li, H, Poulos, T.L. 登録日 2018-12-21 公開日 2019-03-13 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Optimization of Blood-Brain Barrier Permeability with Potent and Selective Human Neuronal Nitric Oxide Synthase Inhibitors Having a 2-Aminopyridine Scaffold. J. Med. Chem., 62, 2019
7NOY	Crystal structure of the heterocyclic toxin methyltransferase from Mycobacterium tuberculosis in complex with substrate 1-hydroxyquinolin-4(1H)-one 分子名称: 1-oxidanylquinolin-4-one, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ... 著者 Denkhaus, L, Sartor, P, Einsle, O, Gerhardt, S, Fetzner, S. 登録日 2021-02-26 公開日 2021-09-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of O-methylation of (2-heptyl-)1-hydroxyquinolin-4(1H)-one and related compounds by the heterocyclic toxin methyltransferase Rv0560c of Mycobacterium tuberculosis. J.Struct.Biol., 213, 2021
7O50	Crystal structure of human legumain in complex with Gly-Ser-Asn peptide 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLY-SER-ASN, ... 著者 Dall, E, Brandstetter, H. 登録日 2021-04-07 公開日 2021-09-22 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Peptide Ligase Activity of Human Legumain Depends on Fold Stabilization and Balanced Substrate Affinities. Acs Catalysis, 11, 2021
8POL	Crystal structure of Plasmodium falciparum Sub1 protease 分子名称: CALCIUM ION, PHOSPHATE ION, Subtilisin-like protease 1 著者 Martinez, M, Bouillon, A, Haouz, A, Barale, J.C, Alzari, P.M. 登録日 2023-07-05 公開日 2024-03-06 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Prodomain-driven enzyme dimerization: a pH-dependent autoinhibition mechanism that controls Plasmodium Sub1 activity before merozoite egress. Mbio, 15, 2024
7O1R	Unspecific peroxygenase from Hypoxylon sp. EC38 in complex with imidazole 分子名称: 1,4-BUTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... 著者 Rotilio, L, Mattevi, A. 登録日 2021-03-30 公開日 2021-09-15 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structural and biochemical studies enlighten the unspecific peroxygenase from Hypoxylon sp. EC38 as an efficient oxidative biocatalyst. Acs Catalysis, 11, 2021
6NPU	C-abl Kinase domain with the activator(cmpd29), N-(1-(3,4-dichlorophenyl)-4,5-dihydro-1H-pyrazol-3-yl)acetamide 分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, GLYCEROL, NONAETHYLENE GLYCOL, ... 著者 Campobasso, N. 登録日 2019-01-18 公開日 2019-03-13 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Identification and Optimization of Novel Small c-Abl Kinase Activators Using Fragment and HTS Methodologies. J. Med. Chem., 62, 2019
7ZNT	CRYSTAL STRUCTURE OF AT7 IN COMPLEX WITH THE SECOND BROMODOMAIN OF HUMAN BRD4 AND PVHL:ELONGINC:ELONGINB 分子名称: (2~{S},4~{R})-1-[(2~{R})-3-[6-[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]hexylsulfanyl]-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-butanoyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Bromodomain-containing protein 4, Elongin-B, ... 著者 Hughes, S.J, Casement, R, Ciulli, A. 登録日 2022-04-22 公開日 2022-09-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Functional E3 ligase hotspots and resistance mechanisms to small-molecule degraders. Nat.Chem.Biol., 19, 2023
6NQ6	Structure & function of a new Aspartylglucosaminuria variant 分子名称: N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase 著者 Pande, S, Guo, H.C. 登録日 2019-01-19 公開日 2019-04-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The T99K variant of glycosylasparaginase shows a new structural mechanism of the genetic disease aspartylglucosaminuria. Protein Sci., 28, 2019
7O3B	Crystal structure of the TTBK2-CEP164 complex bound to a camelid nanobody 分子名称: Nanobody 36Z, Tau-tubulin kinase 2,Centrosomal protein of 164 kDa 著者 e Silva, I.R, van Breugel, M. 登録日 2021-04-01 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
5D98	Influenza C Virus RNA-dependent RNA Polymerase - Space group P43212 分子名称: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E. 登録日 2015-08-18 公開日 2015-10-21 最終更新日 2017-09-13 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Crystal structure of the RNA-dependent RNA polymerase from influenza C virus. Nature, 527, 2015

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