PDB: 55698 件ウェブページステータス検索Chemie searchBIRD

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8FAZ	Cryo-EM structure of the human BCDX2 complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair protein RAD51 homolog 2, DNA repair protein RAD51 homolog 3, ... 著者 Jia, L, Wasmuth, E.V, Ruben, E.A, Sung, P, Rawal, Y, Greene, E.C, Meir, A, Olsen, S.K. 登録日 2022-11-29 公開日 2023-06-21 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Structural insights into BCDX2 complex function in homologous recombination. Nature, 619, 2023
8BHD	N-terminal domain of Plasmodium berghei glutamyl-tRNA synthetase (Tbxo4 derivative crystal structure) 分子名称: GLYCEROL, Glutamate--tRNA ligase, SULFATE ION, ... 著者 Benas, P, Jaramillo Ponce, J.R, Legrand, P, Frugier, M, Sauter, C. 登録日 2022-10-31 公開日 2023-01-25 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (3.17 Å) 主引用文献 Solution X-ray scattering highlights discrepancies in Plasmodium multi-aminoacyl-tRNA synthetase complexes. Protein Sci., 32, 2023
8K3C	Nipah virus Attachment glycoprotein with 41-6 antibody fragment 分子名称: Glycoprotein G, Heavy chain of 41-6 Fab fragments, Light chain of 41-6 Fab fragment 著者 Sun, M.M. 登録日 2023-07-15 公開日 2024-05-01 実験手法 ELECTRON MICROSCOPY (2.88 Å) 主引用文献 Potent human neutralizing antibodies against Nipah virus derived from two ancestral antibody heavy chains. Nat Commun, 15, 2024
8BT1	YdaT transcription regulator (CII functional analog) 分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ... 著者 Prolic-Kalinsek, M, Loris, R. 登録日 2022-11-27 公開日 2023-02-22 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.39788437 Å) 主引用文献 Structural basis of DNA binding by YdaT, a functional equivalent of the CII repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7. Acta Crystallogr D Struct Biol, 79, 2023
3BJ4	The KCNQ1 (Kv7.1) C-terminus, a multi-tiered scaffold for subunit assembly and protein interaction 分子名称: NICKEL (II) ION, Potassium voltage-gated channel subfamily KQT member 1 著者 Wiener, R, Hirsch, J.A. 登録日 2007-12-03 公開日 2008-01-15 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The KCNQ1 (Kv7.1) COOH terminus, a multitiered scaffold for subunit assembly and protein interaction. J.Biol.Chem., 283, 2008
3E0I	Cu2+ substituted Aquifex aeolicus KDO8PS in complex with PEP 分子名称: 2-dehydro-3-deoxyphosphooctonate aldolase, COPPER (II) ION, PHOSPHATE ION, ... 著者 Gatti, D.L. 登録日 2008-07-31 公開日 2009-05-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.703 Å) 主引用文献 Electronic structure of the metal center in the Cd(2+), Zn(2+), and Cu(2+) substituted forms of KDO8P synthase: implications for catalysis. Biochemistry, 48, 2009
8EFS	CryoEM of the soluble OPA1 tetramer from the apo helical assembly on a lipid membrane 分子名称: Dynamin-like 120 kDa protein, form S1 著者 Nyenhuis, S.B, Wu, X, Stanton, A.E, Strub, M.P, Yim, Y.I, Canagarajah, B, Hinshaw, J.E. 登録日 2022-09-09 公開日 2023-06-28 最終更新日 2023-09-13 実験手法 ELECTRON MICROSCOPY (9.68 Å) 主引用文献 OPA1 helical structures give perspective to mitochondrial dysfunction. Nature, 620, 2023
7ZOB	Metagenomic cytidine deaminase Cdd 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Metagenomic cytidine deaminase Cdd, SULFATE ION, ... 著者 Tamulaitiene, G, Urbeliene, N, Meskys, R. 登録日 2022-04-25 公開日 2023-02-01 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Cytidine deaminases catalyze the conversion of N ( S , O ) 4 -substituted pyrimidine nucleosides. Sci Adv, 9, 2023
6WP6	Pyruvate Kinase M2 mutant-S37E K433E 分子名称: GLYCEROL, MAGNESIUM ION, NITRATE ION, ... 著者 Nandi, S, Razzaghi, M, Srivastava, D, Dey, M. 登録日 2020-04-26 公開日 2020-10-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural basis for allosteric regulation of pyruvate kinase M2 by phosphorylation and acetylation. J.Biol.Chem., 295, 2020
4YNG	Twinned pyruvate kinase from E. coli in the T-state 分子名称: Pyruvate kinase I, SULFATE ION 著者 Donovan, K.A, Dobson, R.C.J. 登録日 2015-03-10 公開日 2015-03-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Grappling with anisotropic data, pseudo-merohedral twinning and pseudo-translational noncrystallographic symmetry: a case study involving pyruvate kinase. Acta Crystallogr D Struct Biol, 72, 2016
6XXM	Crystal Structure of Human Deoxyhypusine Synthase in complex with putrescine 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,4-DIAMINOBUTANE, Deoxyhypusine synthase 著者 Wator, E, Wilk, P, Grudnik, P. 登録日 2020-01-27 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Half Way to Hypusine-Structural Basis for Substrate Recognition by Human Deoxyhypusine Synthase. Biomolecules, 10, 2020
4YAK	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with coenzyme A, acetyl-coenzyme A and with phosphorylated phosphohistidine segment (site I orientation) 分子名称: ACETYL COENZYME *A, COENZYME A, alpha subunit of Acyl-CoA synthetase (NDP forming), ... 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-17 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.464 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016
3G5O	The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ... 著者 Miallau, L, Cascio, D, Eisenberg, D, TB Structural Genomics Consortium (TBSGC), Integrated Center for Structure and Function Innovation (ISFI) 登録日 2009-02-05 公開日 2009-04-14 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Comparative proteomics identifies the cell-associated lethality of M. tuberculosis RelBE-like toxin-antitoxin complexes. Structure, 21, 2013
7UMG	Crystal structure of human CD8aa-MR1-Ac-6-FP complex 分子名称: Beta-2-microglobulin, CHLORIDE ION, Major histocompatibility complex class I-related gene protein, ... 著者 Awad, W, Rossjohn, J. 登録日 2022-04-06 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 CD8 coreceptor engagement of MR1 enhances antigen responsiveness by human MAIT and other MR1-reactive T cells. J.Exp.Med., 219, 2022
4YAJ	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 (apo form) 分子名称: SODIUM ION, alpha subunit of Acetyl-coenzyme A synthetase (dinucleotide-forming) 3, beta subunit of Acetyl-coenzyme A synthetase (dinucleotide-forming) 3 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-17 公開日 2016-01-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016
3B6J	WrbA from Escherichia coli, NADH complex 分子名称: ADENOSINE MONOPHOSPHATE, FLAVIN MONONUCLEOTIDE, Flavoprotein wrbA, ... 著者 Andrade, S.L.A, Patridge, E.V, Ferry, J.G, Einsle, O. 登録日 2007-10-29 公開日 2007-12-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of the NADH:quinone oxidoreductase WrbA from Escherichia coli. J.Bacteriol., 189, 2007
4N87	Crystal structure of V30M mutant human transthyretin complexed with glabridin 分子名称: 4-[(3R)-8,8-dimethyl-3,4-dihydro-2H,8H-pyrano[2,3-f]chromen-3-yl]benzene-1,3-diol, Transthyretin 著者 Yokoyama, T, Kosaka, Y, Mizuguchi, M. 登録日 2013-10-17 公開日 2014-02-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.794 Å) 主引用文献 Crystal structures of human transthyretin complexed with glabridin J.Med.Chem., 57, 2014
8EPX	Type IIS Restriction Endonuclease PaqCI, DNA bound 分子名称: CALCIUM ION, DNA 1a, DNA 1b, ... 著者 Kennedy, M.A, Stoddard, B.L. 登録日 2022-10-06 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 Structures, activity and mechanism of the Type IIS restriction endonuclease PaqCI. Nucleic Acids Res., 51, 2023
6VO8	X-ray structure of the Cj1427 in the presence of NADH and GDP-D-glycero-D-mannoheptose, an essential NAD-dependent dehydrogenase from Campylobacter jejuni 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Putative sugar-nucleotide epimerase/dehydratease, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-3~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S},5~{S},6~{S})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl] hydrogen phosphate 著者 Spencer, K.D, Anderson, T.K, Thoden, J.B, Huddleston, J.P, Raushel, F.M, Holden, H.M. 登録日 2020-01-30 公開日 2020-03-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Analysis of Cj1427, an Essential NAD-Dependent Dehydrogenase for the Biosynthesis of the Heptose Residues in the Capsular Polysaccharides ofCampylobacter jejuni. Biochemistry, 59, 2020
4YB8	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with phosphate and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-18 公開日 2016-01-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016
4BX6	trans-divalent streptavidin 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, STREPTAVIDIN 著者 Fairhead, M, Krndija, D, Lowe, E.D, Howarth, M. 登録日 2013-07-08 公開日 2013-09-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.595 Å) 主引用文献 Plug-and-Play Pairing Via Defined Divalent Streptavidins. J.Mol.Biol., 426, 2014
1GV1	Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases 分子名称: MALATE DEHYDROGENASE 著者 Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H. 登録日 2002-02-04 公開日 2002-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases J.Mol.Biol., 318, 2002
6WP4	Pyruvate Kinase M2 mutant-S37E 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Nandi, S, Razzaghi, M, Srivastava, D, Dey, M. 登録日 2020-04-26 公開日 2020-09-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for allosteric regulation of pyruvate kinase M2 by phosphorylation and acetylation. J.Biol.Chem., 295, 2020
8ESD	Crystal structure of COMMD7-COMMD9-COMMD5-COMMD10 tetramer 分子名称: COMM domain-containing protein 10, COMM domain-containing protein 5, COMM domain-containing protein 7, ... 著者 Healy, M.D, Collins, B.M. 登録日 2022-10-13 公開日 2023-05-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.33 Å) 主引用文献 Structure of the endosomal Commander complex linked to Ritscher-Schinzel syndrome. Cell, 186, 2023
1GUY	Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases 分子名称: CADMIUM ION, MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H. 登録日 2002-02-04 公開日 2002-02-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases J.Mol.Biol., 318, 2002

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