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8ATU
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BU of 8atu by Molmil
Cryo-EM structure of human BIRC6
分子名称: Baculoviral IAP repeat-containing protein 6, ZINC ION
著者Ehrmann, J.F, Grabarczyk, D.B, Clausen, T.
登録日2022-08-24
公開日2023-02-15
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for regulation of apoptosis and autophagy by the BIRC6/SMAC complex.
Science, 379, 2023
6J1R
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BU of 6j1r by Molmil
Crystal structure of Candida Antarctica Lipase B mutant - RR
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Lipase B, ...
著者Cen, Y.X, Zhou, J.H, Wu, Q.
登録日2018-12-29
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Stereodivergent Protein Engineering of a Lipase To Access All Possible Stereoisomers of Chiral Esters with Two Stereocenters.
J.Am.Chem.Soc., 141, 2019
8G3H
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BU of 8g3h by Molmil
Structure of cobalamin-dependent methionine synthase (MetH) in a resting state
分子名称: COBALAMIN, Methionine synthase, ZINC ION
著者Watkins, M.B, Ando, N.
登録日2023-02-07
公開日2023-06-28
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Conformational switching and flexibility in cobalamin-dependent methionine synthase studied by small-angle X-ray scattering and cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA, 120, 2023
6N2W
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BU of 6n2w by Molmil
The structure of Stable-5-Lipoxygenase bound to NDGA
分子名称: 4-[(2R,3S)-3-[(3,4-DIHYDROXYPHENYL)METHYL]-2-METHYLBUTYL]BENZENE-1,2-DIOL, Arachidonate 5-lipoxygenase, FE (II) ION
著者Newcomer, M.E, Gilbert, N.C, Neau, D.B.
登録日2018-11-14
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural and mechanistic insights into 5-lipoxygenase inhibition by natural products.
Nat.Chem.Biol., 16, 2020
3JXY
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BU of 3jxy by Molmil
Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing a GT Mismatch
分子名称: DNA (5'-D(*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*GP*AP*CP*GP*GP*G)-3'), alkylpurine DNA glycosylase AlkD
著者Rubinson, E.H, Eichman, B.F.
登録日2009-09-21
公開日2010-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An unprecedented nucleic acid capture mechanism for excision of DNA damage.
Nature, 468, 2010
1F7Y
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BU of 1f7y by Molmil
THE CRYSTAL STRUCTURE OF TWO UUCG LOOPS HIGHLIGHTS THE ROLE PLAYED BY 2'-HYDROXYL GROUPS IN ITS UNUSUAL STABILITY
分子名称: 16S RIBOSOMAL RNA FRAGMENT, 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, ...
著者Ennifar, E, Nikouline, A, Serganov, A, Tishchenko, S, Nevskaya, N, Garber, M, Ehresmann, B, Ehresmann, C, Nikonov, S, Dumas, P.
登録日2000-06-28
公開日2000-11-22
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of UUCG tetraloop.
J.Mol.Biol., 304, 2000
5ADN
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BU of 5adn by Molmil
Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-(((3-((Dimethylamino)methyl)phenyl)amino)methyl) quinolin-2-amine
分子名称: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[[[3-[(dimethylamino)methyl]phenyl]amino]methyl]quinolin-2-amine, ...
著者Li, H, Poulos, T.L.
登録日2015-08-20
公開日2015-10-28
最終更新日2015-11-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase.
J.Med.Chem., 58, 2015
1F7U
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BU of 1f7u by Molmil
CRYSTAL STRUCTURE OF THE ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNA(ARG) AND L-ARG
分子名称: ARGININE, ARGINYL-TRNA SYNTHETASE, SULFATE ION, ...
著者Delagoutte, B, Moras, D, Cavarelli, J.
登録日2000-06-28
公開日2001-06-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献tRNA aminoacylation by arginyl-tRNA synthetase: induced conformations during substrates binding
EMBO J., 19, 2000
1F7V
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BU of 1f7v by Molmil
CRYSTAL STRUCTURE OF YEAST ARGINYL-TRNA SYNTHETASE COMPLEXED WITH THE TRNAARG
分子名称: ARGINYL-TRNA SYNTHETASE, TRNA(ARG)
著者Delagoutte, B, Moras, D, Cavarelli, J.
登録日2000-06-28
公開日2001-06-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献tRNA aminoacylation by arginyl-tRNA synthetase: induced conformations during substrates binding
EMBO J., 19, 2000
6ZQA
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BU of 6zqa by Molmil
Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state A (Poly-Ala)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R.
登録日2020-07-09
公開日2020-09-23
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献90 S pre-ribosome transformation into the primordial 40 S subunit.
Science, 369, 2020
3JR6
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BU of 3jr6 by Molmil
Sequential reorganization of beta-sheet topology by insertion of a single strand
分子名称: Lysozyme, SULFATE ION
著者Sagermann, M, Baas, W.A, Matthews, B.W.
登録日2009-09-08
公開日2009-10-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Sequential reorganization of beta-sheet topology by insertion of a single strand.
Protein Sci., 15, 2006
7A46
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BU of 7a46 by Molmil
small conductance mechanosensitive channel YbiO
分子名称: Putative transport protein
著者Flegler, V.J, Rasmussen, A, Rao, S, Wu, N, Zenobi, R, Sansom, M.S.P, Hedrich, R, Rasmussen, T, Boettcher, B.
登録日2020-08-19
公開日2020-11-18
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The MscS-like channel YnaI has a gating mechanism based on flexible pore helices.
Proc.Natl.Acad.Sci.USA, 117, 2020
7L99
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BU of 7l99 by Molmil
Crystal structure of BRDT bromodomain 2 in complex with CDD-1302
分子名称: Bromodomain testis-specific protein, N-[3-(acetylamino)-4-methylphenyl]-3-(4-amino-2-methylphenyl)-1-methyl-1H-indazole-5-carboxamide, O-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)
著者Sharma, R, Yu, Z, Ku, A.F, Anglin, J.L, Ucisik, M.N, Faver, J.C, Sankaran, B, Kim, C, Matzuk, M.M.
登録日2021-01-03
公開日2021-06-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery and characterization of bromodomain 2-specific inhibitors of BRDT.
Proc.Natl.Acad.Sci.USA, 118, 2021
1BXK
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BU of 1bxk by Molmil
DTDP-GLUCOSE 4,6-DEHYDRATASE FROM E. COLI
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROTEIN (DTDP-GLUCOSE 4,6-DEHYDRATASE)
著者Thoden, J.B, Hegeman, A.D, Frey, P.A, Holden, H.M.
登録日1998-10-05
公開日1998-10-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular Structure of Dtdp-Glucose 4,6-Dehydratase from E. Coli
Protein Sci.
7A98
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BU of 7a98 by Molmil
SARS-CoV-2 Spike Glycoprotein with 3 ACE2 Bound
分子名称: Angiotensin-converting enzyme 2, Spike glycoprotein
著者Benton, D.J, Wrobel, A.G, Rosenthal, P.B, Gamblin, S.J.
登録日2020-09-01
公開日2020-09-23
最終更新日2020-12-16
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Receptor binding and priming of the spike protein of SARS-CoV-2 for membrane fusion.
Nature, 588, 2020
1P1R
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BU of 1p1r by Molmil
Horse liver alcohol dehydrogenase complexed with NADH and R-N-1-methylhexylformamide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, (R)-N-(1-METHYL-HEXYL)-FORMAMIDE, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ...
著者Venkataramaiah, T.H, Plapp, B.V.
登録日2003-04-13
公開日2003-07-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Formamides mimic aldehydes and inhibit liver alcohol dehydrogenases and ethanol metabolism
J.Biol.Chem., 278, 2003
4PFR
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BU of 4pfr by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RHODOBACTER SPHAEROIDES (Rsph17029_3541, TARGET EFI-510203), APO OPEN PARTIALLY DISORDERED
分子名称: D-MALATE, TRAP dicarboxylate transporter, DctP subunit
著者Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2014-04-30
公開日2014-05-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
8HLV
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BU of 8hlv by Molmil
Bry-LHCII homotrimer of Bryopsis corticulans
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
著者Li, Z.H, Shen, J.R, Wang, W.D.
登録日2022-12-01
公開日2023-09-06
最終更新日2023-10-18
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
7L9A
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BU of 7l9a by Molmil
Crystal structure of BRDT bromodomain 2 in complex with CDD-1102
分子名称: BETA-MERCAPTOETHANOL, Bromodomain testis-specific protein, N~1~-(5-{[3-(4-amino-2-methylphenyl)-1-methyl-1H-indazole-5-carbonyl]amino}-2-methylphenyl)-N~4~-methylbenzene-1,4-dicarboxamide
著者Sharma, R, Kaur, G, Yu, Z, Ku, A.F, Anglin, J.L, Ucisik, M.N, Faver, J.C, Sankaran, B, Kim, C, Matzuk, M.M.
登録日2021-01-03
公開日2021-06-30
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Discovery and characterization of bromodomain 2-specific inhibitors of BRDT.
Proc.Natl.Acad.Sci.USA, 118, 2021
6MR4
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BU of 6mr4 by Molmil
Crystal structure of the Sth1 bromodomain from S.cerevisiae
分子名称: Nuclear protein STH1/NPS1
著者Seo, H.S, Hashimoto, H, Krolak, A, Debler, E.W, Blus, B.J.
登録日2018-10-11
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Substrate Affinity and Specificity of the ScSth1p Bromodomain Are Fine-Tuned for Versatile Histone Recognition.
Structure, 27, 2019
8GMU
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BU of 8gmu by Molmil
Structure of lambda repressor in complex with RecA filament
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3'), MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Gao, B, Feng, Y.
登録日2022-08-22
公開日2022-12-21
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献Structural basis for regulation of SOS response in bacteria.
Proc.Natl.Acad.Sci.USA, 120, 2023
5FDO
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BU of 5fdo by Molmil
Mcl-1 complexed with small molecule inhibitor
分子名称: 3-[3-(4-chloranyl-3,5-dimethyl-phenoxy)propyl]-~{N}-(phenylsulfonyl)-1~{H}-indole-2-carboxamide, Induced myeloid leukemia cell differentiation protein Mcl-1
著者Zhao, B.
登録日2015-12-16
公開日2016-03-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of 2-Indole-acylsulfonamide Myeloid Cell Leukemia 1 (Mcl-1) Inhibitors Using Fragment-Based Methods.
J.Med.Chem., 59, 2016
1BQ7
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BU of 1bq7 by Molmil
DSBA MUTANT P151A, ROLE OF THE CIS-PROLINE IN THE ACTIVE SITE OF DSBA
分子名称: PROTEIN (DISULFIDE OXIDOREDUCTASE)
著者Charbonnier, J.-B, Stura, E.A.
登録日1998-08-21
公開日1999-08-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献On the role of the cis-proline residue in the active site of DsbA.
Protein Sci., 8, 1999
5MKQ
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BU of 5mkq by Molmil
TtuA enzyme containing a [4Fe-4S]
分子名称: IRON/SULFUR CLUSTER, TtuA PH0300, ZINC ION
著者Arragain, S, Bimai, O, Legrand, P, Golinelli-Pimpaneau, B.
登録日2016-12-05
公開日2017-06-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Nonredox thiolation in tRNA occurring via sulfur activation by a [4Fe-4S] cluster.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5SVC
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BU of 5svc by Molmil
Mechanism of ATP-Dependent Acetone Carboxylation, Acetone Carboxylase nucleotide-free structure
分子名称: Acetone carboxylase alpha subunit, Acetone carboxylase beta subunit, Acetone carboxylase gamma subunit, ...
著者Eilers, B.J, Mus, F, Alleman, A.B, Kabasakal, B.V, Murray, J.W, Nocek, B.P, Dubois, J.L, Peters, J.W.
登録日2016-08-05
公開日2017-08-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis for the Mechanism of ATP-Dependent Acetone Carboxylation.
Sci Rep, 7, 2017

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