PDB: 20505 件ウェブページステータス検索Chemie searchBIRD

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2XXM	Crystal structure of the HIV-1 capsid protein C-terminal domain in complex with a camelid VHH and the CAI peptide. 分子名称: ACETATE ION, CAMELID VHH 9, CAPSID PROTEIN P24, ... 著者 Igonet, S, Vaney, M.C, Bartonova, V, Helma, J, Rothbauer, U, Leonhardt, H, Stura, E, Krausslich, H.-G, Rey, F.A. 登録日 2010-11-10 公開日 2011-10-12 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Targeting HIV-1 Virion Formation with Nanobodies -Implications for the Design of Assembly Inhibitors To be Published
2WPY	GCN4 leucine zipper mutant with one VxxNxxx motif coordinating chloride 分子名称: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4 著者 Zeth, K, Hartmann, M.D, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B. 登録日 2009-08-12 公開日 2009-11-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2XTI	Asparaginyl-tRNA synthetase from Brugia malayi complexed with ATP:Mg and L-Asp-beta-NOH adenylate:PPi:Mg 分子名称: 5'-O-[(R)-{[(2S)-2-amino-4-(hydroxyamino)-4-oxobutanoyl]oxy}(hydroxy)phosphoryl]adenosine, ADENOSINE-5'-TRIPHOSPHATE, ASPARAGINYL-TRNA SYNTHETASE, ... 著者 Crepin, T, Haertlein, M, Kron, M, Cusack, S. 登録日 2010-10-10 公開日 2010-12-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A Hybrid Structural Model of the Complete Brugia Malayi Cytoplasmic Asparaginyl-tRNA Synthetase. J.Mol.Biol., 405, 2011
2XQW	Structure of Factor H domains 19-20 in complex with complement C3d 分子名称: COMPLEMENT C3, COMPLEMENT FACTOR H 著者 Kajander, T, Lehtinen, M.J, Hyvarinen, S, Bhattacharjee, A, Leung, E, Isenman, D.E, Meri, S, Jokiranta, T.S, Goldman, A. 登録日 2010-09-07 公開日 2011-02-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.306 Å) 主引用文献 Dual Interaction of Factor H with C3D and Glycosaminoglycans in Host-Nonhost Discrimination by Complement. Proc.Natl.Acad.Sci.USA, 108, 2011
2VC2	Re-refinement of Integrin AlphaIIbBeta3 Headpiece Bound to Antagonist L-739758 分子名称: 2-(S)-[N-(3-PYRIDYLSULFONYL)AMINO]-3-[[2-CARBONYL-5-[2-(PIPERIDIN-4-YL)ETHYL]-THIENO[2,3-B]THIOPHENEYL]AMINO]-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Springer, T.A, Zhu, J, Xiao, T. 登録日 2007-09-18 公開日 2008-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural Basis for Distinctive Recognition of Fibrinogen Gammac Peptide by the Platelet Integrin Alphaiibbeta3. J.Cell Biol., 182, 2008
2VLO	K97A mutant of E9 DNase domain in complex with Im9 分子名称: COLICIN E9, COLICIN-E9 IMMUNITY PROTEIN, SULFATE ION 著者 Keeble, A.H, Joachimiak, L.A, Mate, M.J, Meenan, N, Kirkpatrick, N, Baker, D, Kleanthous, C. 登録日 2008-01-15 公開日 2008-05-20 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Experimental and Computational Analyses of the Energetic Basis for Dual Recognition of Immunity Proteins by Colicin Endonucleases. J.Mol.Biol., 379, 2008
2VCZ	Complex structure of prostaglandin D2 synthase at 1.95A. 分子名称: 3-(4-nitrophenyl)-1H-pyrazole, GLUTATHIONE, GLUTATHIONE-REQUIRING PROSTAGLANDIN D SYNTHASE 著者 Hohwy, M, Spadola, L, Lundquist, B, von Wachenfeldt, K, Persdotter, S, Hawtin, P, Dahmen, J, Groth-Clausen, I, Folmer, R.H.A, Edman, K. 登録日 2007-09-28 公開日 2008-04-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Novel Prostaglandin D Synthase Inhibitors Generated by Fragment-Based Drug Design. J.Med.Chem., 51, 2008
2VD0	Complex structure of prostaglandin D2 synthase at 2.2A. 分子名称: 2-{[(2E)-3-(3,4-dimethoxyphenyl)prop-2-enoyl]amino}benzoic acid, GLUTATHIONE, GLUTATHIONE-REQUIRING PROSTAGLANDIN D SYNTHASE, ... 著者 Hohwy, M, Spadola, L, Lundquist, B, von Wachenfeldt, K, Persdotter, S, Hawtin, P, Dahmen, J, Groth-Clausen, I, Folmer, R.H.A, Edman, K. 登録日 2007-09-28 公開日 2008-04-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Novel Prostaglandin D Synthase Inhibitors Generated by Fragment-Based Drug Design. J.Med.Chem., 51, 2008
2VAN	Nucleotidyl Transfer Mechanism of Mismatched dNTP Incorporation by DNA Polymerase b by Structural and Kinetic Analyses 分子名称: DNA POLYMERSE BETA 著者 Chan, H, Chou, C, Tang, K, Niebuhr, M, Tung, C, Tsai, M. 登録日 2007-09-03 公開日 2008-04-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mismatched Dntp Incorporation by DNA Polymerase Beta Does not Proceed Via Globally Different Conformational Pathways. Nucleic Acids Res., 36, 2008
2XGY	Complex of Rabbit Endogenous Lentivirus (RELIK)Capsid with Cyclophilin A 分子名称: GLYCEROL, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A, RELIK CAPSID N-TERMINAL DOMAIN 著者 Goldstone, D.C, Robertson, L.E, Haire, L.F, Stoye, J.P, Taylor, I.A. 登録日 2010-06-08 公開日 2010-09-22 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and Functional Analysis of Prehistoric Lentiviruses Uncovers an Ancient Molecular Interface. Cell Host Microbe, 8, 2010
2YX1	Crystal structure of M.jannaschii tRNA m1G37 methyltransferase 分子名称: Hypothetical protein MJ0883, SINEFUNGIN, ZINC ION 著者 Goto-Ito, S, Ito, T, Ishii, R, Bessho, Y, Yokoyama, S. 登録日 2007-04-23 公開日 2008-04-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of archaeal tRNA(m(1)G37)methyltransferase aTrm5. Proteins, 72, 2008
1EB1	Complex structure of human thrombin with N-methyl-arginine inhibitor 分子名称: 3-CYCLOHEXYL-D-ALANYL-L-PROLYL-N~2~-METHYL-L-ARGININE, PEPTIDE INHIBITOR, THROMBIN HEAVY CHAIN, ... 著者 Friedrich, R, Steinmetzer, T, Bode, W. 登録日 2001-07-18 公開日 2002-01-28 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The Methyl Group of N(Alpha)(Me)Arg-Containing Peptides Disturbs the Active-Site Geometry of Thrombin, Impairing Efficient Cleavage J.Mol.Biol., 316, 2002
1WAY	Active site thrombin inhibitors 分子名称: 4-[3-(4-CHLOROPHENYL)-1H-PYRAZOL-5-YL]PIPERIDINE, DIMETHYL SULFOXIDE, HIRUGEN, ... 著者 Hartshorn, M.J, Murray, C.W, Cleasby, A, Frederickson, M, Tickle, I.J, Jhoti, H. 登録日 2004-10-28 公開日 2005-01-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Fragment-Based Lead Discovery Using X-Ray Crystallography J.Med.Chem., 48, 2005
1EJE	CRYSTAL STRUCTURE OF AN FMN-BINDING PROTEIN 分子名称: FLAVIN MONONUCLEOTIDE, FMN-BINDING PROTEIN, NICKEL (II) ION, ... 著者 Christendat, D, Saridakis, V, Bochkarev, A, Arrowsmith, C, Edwards, A.M, Northeast Structural Genomics Consortium (NESG) 登録日 2000-03-02 公開日 2000-10-11 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural proteomics of an archaeon. Nat.Struct.Biol., 7, 2000
1EQT	MET-RANTES 分子名称: SULFATE ION, T-CELL SPECIFIC RANTES PROTEIN 著者 Hoover, D.M, Shaw, J, Gryczynski, Z, Proudfoot, A.E.I, Wells, T. 登録日 2000-04-06 公開日 2000-04-19 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The Crystal Structure of MET-RANTES: Comparison with Native RANTES and AOP-RANTES PROTEIN PEPT.LETT., 7, 2000
1W6Z	High Energy Tetragonal Lysozyme X-ray Structure 分子名称: CHLORIDE ION, HOLMIUM (III) ATOM, LYSOZYME C 著者 Jakoncic, J, Aslantas, M, Honkimaki, V, Di Michiel, M, Stojanoff, V. 登録日 2004-08-25 公開日 2004-11-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Anomalous Diffraction at Ultra-High Energy for Protein Crystallography. J.Appl.Crystallogr., 39, 2006
1WBG	Active site thrombin inhibitors 分子名称: 3-(4-CHLOROPHENYL)-5-(METHYLTHIO)-4H-1,2,4-TRIAZOLE, DIMETHYL SULFOXIDE, HIRUGEN, ... 著者 Hartshorn, M.J, Murray, C.W, Cleasby, A, Frederickson, M, Tickle, I.J, Jhoti, H. 登録日 2004-11-01 公開日 2005-01-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Fragment-Based Lead Discovery Using X-Ray Crystallography J.Med.Chem., 48, 2005
1W4Q	Binding of Nonnatural 3'-Nucleotides to Ribonuclease A 分子名称: 2'-FLUORO-2'-DEOXYURIDINE 3'-MONOPHOSPHATE, PANCREATIC RIBONUCLEASE A 著者 Jenkins, C.L, Thiyagarajan, N, Sweeney, R.Y, Guy, M.P, Kelemen, B.R, Acharya, K.R, Raines, R.T. 登録日 2004-07-27 公開日 2005-02-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Binding of Non-Natural 3'-Nucleotides to Ribonuclease A FEBS J., 272, 2005
1W42	T. celer L30e R92A variant 分子名称: 50S RIBOSOMAL PROTEIN L30E 著者 Lee, C.F, Lee, K.M, Chan, S.H, Allen, M.D, Bycroft, M, Wong, K.B. 登録日 2004-07-22 公開日 2005-04-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Electrostatic Interactions Contribute to Reduced Heat Capacity Change of Unfolding in a Thermophilic Ribosomal Protein L30E J.Mol.Biol., 348, 2005
1EEL	STRUCTURE OF A COMPLEX BETWEEN THE DNA SEQUENCE DCGCGAATTCGCG AND BIS[PIPERIDINO-ETHYL]-FURAMIDINE 分子名称: 2,5-BIS-[4-[CYCLOPENTA-1,3-DIEN-5-YLAMINO-1-AMINOMETHYL]-PHEN-1-YL]FURAN, 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3' 著者 Neidle, S, Simpson, I.J. 登録日 2000-02-01 公開日 2000-02-09 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A thermodynamic and structural analysis of DNA minor-groove complex formation. J.Mol.Biol., 300, 2000
1W5Y	HIV-1 protease in complex with fluoro substituted diol-based C2- symmetric inhibitor 分子名称: (2R,3R,4R,5R)-2,5-BIS[(2,5-DIFLUOROBENZYL)OXY]-3,4-DIHYDROXY-N,N'-BIS[(1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]HEXANEDIAMIDE, POL POLYPROTEIN 著者 Lindberg, J, Pyring, D, Loewgren, S, Rosenquist, A, Zuccarello, G, Kvarnstroem, I, Zhang, H, Vrang, L, Claesson, B, Hallberg, A, Samuelsson, B, Unge, T. 登録日 2004-08-10 公開日 2004-10-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Symmetric Fluoro-Substituted Diol-Based HIV Protease Inhibitors. Ortho-Fluorinated and Meta-Fluorinated P1/P1'-Benzyloxy Side Groups Significantly Improve the Antiviral Activity and Preserve Binding Efficacy Eur.J.Biochem., 271, 2004
1W5U	GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE) 分子名称: CHLORIDE ION, ETHANOL, GRAMICIDIN D, ... 著者 Glowka, M.L, Olczak, A, Bojarska, J, Szczesio, M, Duax, W.L, Burkhart, B.M, Pangborn, W.A, Langs, D.A, Wawrzak, Z. 登録日 2004-08-10 公開日 2005-09-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Structure of Gramicidin D-Rbcl Complex at Atomic Resolution from Low-Temperature Synchrotron Data: Interactions of Double-Stranded Gramicidin Channel Contents and Cations with Channel Wall Acta Crystallogr.,Sect.D, 61, 2005
1W40	T. celer L30e K9A variant 分子名称: 50S RIBOSOMAL PROTEIN L30E 著者 Lee, C.F, Lee, K.M, Chan, S.H, Allen, M.D, Bycroft, M, Wong, K.B. 登録日 2004-07-22 公開日 2005-04-08 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Electrostatic Interactions Contribute to Reduced Heat Capacity Change of Unfolding in a Thermophilic Ribosomal Protein L30E J.Mol.Biol., 348, 2005
1W9E	Crystal structure of the PDZ tandem of human syntenin in complex with TNEFYF peptide 分子名称: BENZOIC ACID, SYNTENIN 1, TNEFYF PEPTIDE 著者 Grembecka, J, Cierpicki, T, Devedjiev, Y, Cooper, D.R, Derewenda, U, Derewenda, Z.S. 登録日 2004-10-09 公開日 2006-03-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 The Binding of the Pdz Tandem of Syntenin to Target Proteins. Biochemistry, 45, 2006
1VZQ	Complex of thrombin with designed inhibitor 7165 分子名称: 4-[(3AS,4R,7R,8AS,8BR)-2-(1,3-BENZODIOXOL-5-YLMETHYL)-7-HYDROXY-1,3-DIOXODECAHYDROPYRROLO[3,4-A]PYRROLIZIN-4-YL]BENZENECARBOXIMIDAMIDE, CALCIUM ION, HIRUDIN VARIANT-2, ... 著者 Shaerer, K, Morgenthaler, M, Seiler, P, Diederich, F, Banner, D.W, Tschopp, T, Obst-Sander, U. 登録日 2004-05-24 公開日 2005-06-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Enantiomerically Pure Thrombin Inhibitors for Exploring the Molecular-Recognition Features of the Oxyanion Hole Helv.Chim.Acta, 87, 2004

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