Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1TZ6
DownloadVisualize
BU of 1tz6 by Molmil
Crystal structure of aminoimidazole riboside kinase from Salmonella enterica complexed with aminoimidazole riboside and ATP analog
分子名称: 5-AMINOIMIDAZOLE RIBONUCLEOSIDE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Zhang, Y, Dougherty, M, Downs, D.M, Ealick, S.E.
登録日2004-07-09
公開日2004-10-12
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of an Aminoimidazole Riboside Kinase from Salmonella enterica; Implications for the Evolution of the Ribokinase Superfamily
STRUCTURE, 12, 2004
4FP4
DownloadVisualize
BU of 4fp4 by Molmil
Crystal structure of isoprenoid synthase a3mx09 (target efi-501993) from pyrobaculum calidifontis
分子名称: GERAN-8-YL GERAN, Polyprenyl synthetase, UNKNOWN ATOM OR ION, ...
著者Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-06-21
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
4F62
DownloadVisualize
BU of 4f62 by Molmil
Crystal structure of a putative farnesyl-diphosphate synthase from Marinomonas sp. MED121 (Target EFI-501980)
分子名称: CHLORIDE ION, GLYCEROL, Geranyltranstransferase, ...
著者Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-05-14
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily.
Proc.Natl.Acad.Sci.USA, 110, 2013
4D53
DownloadVisualize
BU of 4d53 by Molmil
Outer surface protein BB0689 from Borrelia burgdorferi
分子名称: BB0689
著者Brangulis, K, Petrovskis, I, Kazaks, A, Tars, K.
登録日2014-11-02
公開日2015-10-14
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and Functional Analysis of Bb0689 from Borrelia Burgdorferi, a Member of the Bacterial CAP Superfamily.
J.Struct.Biol., 192, 2015
2HOS
DownloadVisualize
BU of 2hos by Molmil
Phage-Selected Homeodomain Bound to Unmodified DNA
分子名称: 3-METHYL-1,3-OXAZOLIDIN-2-ONE, 5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*CP*CP*GP*GP*A)-3', ...
著者Shokat, K.M, Feldman, M.E, Simon, M.D.
登録日2006-07-16
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and properties of a re-engineered homeodomain protein-DNA interface.
Acs Chem.Biol., 1, 2006
1XX4
DownloadVisualize
BU of 1xx4 by Molmil
Crystal Structure of Rat Mitochondrial 3,2-Enoyl-CoA
分子名称: 3,2-trans-enoyl-CoA isomerase, mitochondrial, BENZAMIDINE, ...
著者Hubbard, P.A, Yu, W, Schulz, H, Kim, J.-J.
登録日2004-11-03
公開日2004-11-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Domain swapping in the low-similarity isomerase/hydratase superfamily: the crystal structure of rat mitochondrial Delta3, Delta2-enoyl-CoA isomerase.
Protein Sci., 14, 2005
2HOT
DownloadVisualize
BU of 2hot by Molmil
Phage selected homeodomain bound to modified DNA
分子名称: 3-PROP-2-YN-1-YL-1,3-OXAZOLIDIN-2-ONE, 5'-D(*AP*TP*CP*CP*GP*GP*GP*GP*AP*TP*TP*AP*CP*AP*TP*GP*GP*CP*AP*AP*A)-3', 5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*CP*CP*CP*CP*GP*GP*A)-3', ...
著者Feldman, M.E, Simon, M.D, Shokat, K.M.
登録日2006-07-16
公開日2006-12-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structure and properties of a re-engineered homeodomain protein-DNA interface.
Acs Chem.Biol., 1, 2006
2ICH
DownloadVisualize
BU of 2ich by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE ATTH (NE1406) FROM NITROSOMONAS EUROPAEA AT 2.00 A RESOLUTION
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Putative AttH, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2006-09-12
公開日2006-10-03
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the first representative of Pfam family PF09410 (DUF2006) reveals a structural signature of the calycin superfamily that suggests a role in lipid metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
2W13
DownloadVisualize
BU of 2w13 by Molmil
High-resolution crystal structure of the P-I snake venom metalloproteinase BaP1 in complex with a peptidomimetic: insights into inhibitor binding
分子名称: (2R,3R)-N^1^-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N^4^-HYDROXY-2-(2-METHYLPROPYL)-3-{[(1,3-THIAZOL-2-YLCARBONYL)AMINO]METHYL}BUTANEDIAMIDE, ACETATE ION, GLYCEROL, ...
著者Lingott, T.J, Schleberger, C, Gutierrez, J.M, Merfort, I.
登録日2008-10-14
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献High-Resolution Crystal Structure of the Snake Venom Metalloproteinase Bap1 Complexed with a Peptidomimetic: Insight Into Inhibitor Binding.
Biochemistry, 48, 2009
2W12
DownloadVisualize
BU of 2w12 by Molmil
High-resolution crystal structure of the P-I snake venom metalloproteinase BaP1 in complex with a peptidomimetic: insights into inhibitor binding
分子名称: (2R,3R)-N^1^-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N^4^-HYDROXY-2-(2-METHYLPROPYL)-3-{[(1,3-THIAZOL-2-YLCARBONYL)AMINO]METHYL}BUTANEDIAMIDE, GLYCEROL, ZINC ION, ...
著者Lingott, T.J, Schleberger, C, Gutierrez, J.M, Merfort, I.
登録日2008-10-14
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献High-Resolution Crystal Structure of the Snake Venom Metalloproteinase Bap1 Complexed with a Peptidomimetic: Insight Into Inhibitor Binding.
Biochemistry, 48, 2009
2W14
DownloadVisualize
BU of 2w14 by Molmil
High-resolution crystal structure of the P-I snake venom metalloproteinase BaP1 in complex with a peptidomimetic: insights into inhibitor binding
分子名称: (2R,3R)-N^1^-[(1S)-2,2-DIMETHYL-1-(METHYLCARBAMOYL)PROPYL]-N^4^-HYDROXY-2-(2-METHYLPROPYL)-3-{[(1,3-THIAZOL-2-YLCARBONYL)AMINO]METHYL}BUTANEDIAMIDE, GLYCEROL, IMIDAZOLE, ...
著者Lingott, T.J, Schleberger, C, Gutierrez, J.M, Merfort, I.
登録日2008-10-14
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献High-Resolution Crystal Structure of the Snake Venom Metalloproteinase Bap1 Complexed with a Peptidomimetic: Insight Into Inhibitor Binding.
Biochemistry, 48, 2009
2J9P
DownloadVisualize
BU of 2j9p by Molmil
Crystal structure of the Bacillus subtilis PBP4a, and its complex with a peptidoglycan mimetic peptide.
分子名称: (2R)-2-AMINO-7-{[(1R)-1-CARBOXYETHYL]AMINO}-7-OXOHEPTANOIC ACID, D-ALANINE, D-alanyl-D-alanine carboxypeptidase DacC
著者Sauvage, E, Herman, R, Kerff, F, Duez, C, Charlier, P.
登録日2006-11-15
公開日2007-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the Bacillus subtilis penicillin-binding protein 4a, and its complex with a peptidoglycan mimetic peptide.
J. Mol. Biol., 371, 2007
4EF4
DownloadVisualize
BU of 4ef4 by Molmil
Crystal structure of STING CTD complex with c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
著者Ouyang, S, Ru, H, Shaw, N, Jiang, Y, Niu, F, Zhu, Y, Qiu, W, Li, Y, Liu, Z.-J.
登録日2012-03-29
公開日2012-05-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.147 Å)
主引用文献Structural analysis of the STING adaptor protein reveals a hydrophobic dimer interface and mode of cyclic di-GMP binding
Immunity, 36, 2012
4WAN
DownloadVisualize
BU of 4wan by Molmil
Crystal structure of Msl5 protein in complex with RNA at 1.8 A
分子名称: ACETATE ION, Branchpoint-bridging protein, GLYCEROL, ...
著者Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
登録日2014-08-29
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
4WAL
DownloadVisualize
BU of 4wal by Molmil
Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A
分子名称: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ...
著者Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S.
登録日2014-08-29
公開日2014-12-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs.
Rna, 21, 2015
4V2L
DownloadVisualize
BU of 4v2l by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 3.4 MGy, focused in disulfide bonds.
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
4V2M
DownloadVisualize
BU of 4v2m by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 34 MGy, focused in disulfide bonds.
分子名称: ACETATE ION, GLYCEROL, SULFATE ION, ...
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.841 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
4V2N
DownloadVisualize
BU of 4v2n by Molmil
Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 85 MGy, focused in disulfide bonds
分子名称: ACETATE ION, SULFATE ION, THIOREDOXIN
著者Campos-Acevedo, A.A, Rudino-Pinera, E.
登録日2014-10-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei.
Molecules, 19, 2014
4EF5
DownloadVisualize
BU of 4ef5 by Molmil
Crystal structure of STING CTD
分子名称: Transmembrane protein 173
著者Ouyang, S, Ru, H, Shaw, N, Jiang, Y, Niu, F, Zhu, Y, Qiu, W, Li, Y, Liu, Z.-J.
登録日2012-03-29
公開日2012-05-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural analysis of the STING adaptor protein reveals a hydrophobic dimer interface and mode of cyclic di-GMP binding
Immunity, 36, 2012
2IJ0
DownloadVisualize
BU of 2ij0 by Molmil
Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1
分子名称: Toxic shock syndrome toxin-1, penultimate affinity-matured variant of hVbeta 2.1, D10
著者Moza, B, Varma, A.K, Buonpane, R.A, Zhu, P, Herfst, C.A, Nicholson, M.J, Wilbuer, A.K, Nulifer, S, Wucherpfenning, K.W, McCormick, J.K, Kranz, D.M, Sundberg, E.J.
登録日2006-09-28
公開日2007-02-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1.
Embo J., 26, 2007
5BQ9
DownloadVisualize
BU of 5bq9 by Molmil
Crystal structure of uncharacterized protein lpg1496 Legionella pneumophila subsp. pneumophila
分子名称: Uncharacterized protein
著者Chang, C, Morar, M, Evdokimova, E, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2015-05-28
公開日2015-06-10
最終更新日2016-01-27
実験手法X-RAY DIFFRACTION (2.2785 Å)
主引用文献Crystal structure of the Legionella pneumophila lem10 effector reveals a new member of the HD protein superfamily.
Proteins, 83, 2015
1C9W
DownloadVisualize
BU of 1c9w by Molmil
CHO REDUCTASE WITH NADP+
分子名称: CHO REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Ye, Q, Li, X, Hyndman, D, Flynn, T.G, Jia, Z.
登録日1999-08-03
公開日2000-01-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of CHO reductase, a member of the aldo-keto reductase superfamily.
Proteins, 38, 2000
5CCV
DownloadVisualize
BU of 5ccv by Molmil
Crystal structure of full-length NS5 from dengue virus type 3
分子名称: RNA-directed RNA polymerase NS5, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Klema, V.J, Choi, K.H.
登録日2015-07-02
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Dengue Virus Nonstructural Protein 5 (NS5) Assembles into a Dimer with a Unique Methyltransferase and Polymerase Interface.
Plos Pathog., 12, 2016
2RFD
DownloadVisualize
BU of 2rfd by Molmil
Crystal structure of the complex between the EGFR kinase domain and a Mig6 peptide
分子名称: ERBB receptor feedback inhibitor 1, Epidermal growth factor receptor, SULFATE ION
著者Zhang, X, Pickin, K.A, Bose, R, Jura, N, Cole, P.A, Kuriyan, J.
登録日2007-09-28
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Inhibition of the EGF receptor by binding of MIG6 to an activating kinase domain interface.
Nature, 450, 2007
5UG0
DownloadVisualize
BU of 5ug0 by Molmil
Human antibody H2897 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2897 heavy chain, ...
著者Raymond, D.D, Caradonna, T, Schmidt, A.G, Harrison, S.C.
登録日2017-01-06
公開日2017-05-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献CryoEM Structure of an Influenza Virus Receptor-Binding Site Antibody-Antigen Interface.
J. Mol. Biol., 429, 2017

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon