PDB: 41522 件ウェブページステータス検索Chemie searchBIRD

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7F2G	Crystal structure of the sensor domain of VbrK from Vibrio rotiferianus (crystal type 1) 分子名称: Histidine kinase 著者 Cho, S.Y, Yoon, S.I. 登録日 2021-06-11 公開日 2022-04-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the antibiotic- and nitrite-responsive histidine kinase VbrK sensor domain from Vibrio rotiferianus. Biochem.Biophys.Res.Commun., 568, 2021
8H8H	Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50) 分子名称: H-NS family protein MvaT 著者 Vasileva, D, Suzuki-Minakuchi, C, Arakawa, T, Nojiri, H. 登録日 2022-10-22 公開日 2022-11-09 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50) To Be Published
6PQN	Crystal structure of HzTransib transposase 分子名称: GLYCEROL, PHOSPHATE ION, Putative DNA-mediated transposase, ... 著者 Liu, C, Yang, Y, Schatz, D.G. 登録日 2019-07-09 公開日 2019-10-09 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Structures of a RAG-like transposase during cut-and-paste transposition. Nature, 575, 2019
2WEU	Crystal structure of tryptophan 5-halogenase (PyrH) complex with substrate tryptophan 分子名称: TRYPTOPHAN, TRYPTOPHAN 5-HALOGENASE 著者 Leang, K, Zhu, X, Naismith, J.H. 登録日 2009-04-01 公開日 2009-04-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Insights in the Regioselectivity in the Enzymatic Chlorination of Tryptophan. J.Mol.Biol., 391, 2009
7EPT	Structural basis for the tethered peptide activation of adhesion GPCRs 分子名称: Adhesion G-protein coupled receptor D1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Ping, Y.-Q, Xiao, P, Yang, F, Zhao, R.-J, Guo, S.-C, Yan, X, Wu, X, Liebscher, I, Xu, H.E, Sun, J.-P. 登録日 2021-04-27 公開日 2022-05-11 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis for the tethered peptide activation of adhesion GPCRs. Nature, 604, 2022
7EQ1	GPR114-Gs-scFv16 complex 分子名称: Adhesion G-protein coupled receptor G5, Gs protein alpha subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... 著者 Ping, Y. 登録日 2021-04-28 公開日 2022-05-11 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for the tethered peptide activation of adhesion GPCRs. Nature, 604, 2022
8HJD	Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide) with glycation 分子名称: Gly-bidentatide, beta-D-fructopyranose 著者 Feng, Y, He, M, Zhang, X. 登録日 2022-11-23 公開日 2022-12-07 実験手法 SOLUTION NMR 主引用文献 Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume. Fitoterapia, 163, 2022
8HJC	Solution structure of cysteine-rich peptide Bidentatide (Achyranthes bidentata peptide) 分子名称: Bidentatide 著者 Feng, Y, He, M, Zhang, X. 登録日 2022-11-23 公開日 2022-12-07 実験手法 SOLUTION NMR 主引用文献 Discovery of a cysteine-rich peptide with glycation modification from Achyranthes bidentata Blume. Fitoterapia, 163, 2022
8KE2	PylRS C-terminus domain mutant bound with L-3-trifluoromethylphenylalanine and AMPNP 分子名称: (2S)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.19639969 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
7FAO	Top7 surface mutant K42A Q43A K46A K57S K58S, and I68R 分子名称: MAGNESIUM ION, Top7 Surface mutant 著者 Ito, Y, Makabe, K. 登録日 2021-07-07 公開日 2022-05-18 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.43 Å) 主引用文献 Surface Engineering of Top7 to Facilitate Structure Determination. Int J Mol Sci, 23, 2022
8KE3	PylRS C-terminus domain mutant bound with D-3-trifluoromethylphenylalanine and AMPNP 分子名称: (2R)-2-azanyl-3-[3-(trifluoromethyl)phenyl]propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.89980984 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
8KE5	PylRS C-terminus domain mutant bound with D-3-chlorophenylalanine and AMPNP 分子名称: (2R)-2-azanyl-3-(3-chlorophenyl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.900073 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
8KE1	PylRS C-terminus domain mutant bound with L-3-bromophenylalanine and AMPNP 分子名称: 3-bromo-L-phenylalanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.50081539 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
8KE6	PylRS C-terminus domain mutant bound with L-3-chlorophenylalanine and AMPNP 分子名称: 3-CHLORO-L-PHENYLALANINE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.89570856 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
8KE4	PylRS C-terminus domain mutant bound with D-3-bromophenylalanine and AMPNP 分子名称: (2R)-2-azanyl-3-(3-bromophenyl)propanoic acid, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Weng, J.H, Tsai, M.D, Wang, Y.S. 登録日 2023-08-11 公開日 2023-11-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.75050962 Å) 主引用文献 Rational design of the genetic code expansion toolkit for in vivo encoding of D-amino acids. Front Genet, 14, 2023
6PIX	Crystal structure of HCV NS3/4A D168A protease in complex with P4-P5-5 (WK-25) 分子名称: 1,2-ETHANEDIOL, NS3/4A protease, SULFATE ION, ... 著者 Zephyr, J, Schiffer, C.A. 登録日 2019-06-27 公開日 2020-03-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Avoiding Drug Resistance by Substrate Envelope-Guided Design: Toward Potent and Robust HCV NS3/4A Protease Inhibitors. Mbio, 11, 2020
7F7Y	Crystal Structure of protein PitB from pilus islet-2 of Streptococcus pneumoniae 分子名称: IODIDE ION, POTASSIUM ION, PitB, ... 著者 Yadav, R.K, Krishnan, V. 登録日 2021-06-30 公開日 2022-06-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 New structural insights into the PI-2 pilus from Streptococcus oralis, an early dental plaque colonizer. Febs J., 289, 2022
8H59	A fungal MAP kinase in complex with an inhibitor 分子名称: Mitogen-activated protein kinase MPS1, ~{N}-[(2~{S})-3-(1~{H}-indol-3-yl)-1-(methylamino)-1-oxidanylidene-propan-2-yl]-8-[2-methoxy-5-(trifluoromethyloxy)phenyl]-1,6-naphthyridine-2-carboxamide 著者 Kong, Z, Zhang, X, Wang, D, Liu, J. 登録日 2022-10-12 公開日 2023-02-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structure-Aided Identification of an Inhibitor Targets Mps1 for the Management of Plant-Pathogenic Fungi. Mbio, 14, 2023
7EZW	Cyclic Peptide that Interacts with the eIF4E Capped-mRNA Binding Site 分子名称: ALA-CYS-GLU-MET-GLY-PHE-PHE-GLN-ASP-CYS-GLY, Eukaryotic translation initiation factor 4E, SODIUM ION 著者 Brown, C.J, Ng, S, Frosi, Y. 登録日 2021-06-02 公開日 2022-06-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Development of a novel peptide aptamer that interacts with the eIF4E capped-mRNA binding site using peptide epitope linker evolution (PELE). Rsc Chem Biol, 3, 2022
7F07	Autonomous VH domain that interacts with eIF4E at the Capped mRNA Binding site. 分子名称: Eukaryotic translation initiation factor 4E, VH domain (VH-DiFCAP-01) 著者 Brown, C.J, Frosi, Y, Ng, S, Lin, Y.C. 登録日 2021-06-03 公開日 2022-06-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Development of a novel peptide aptamer that interacts with the eIF4E capped-mRNA binding site using peptide epitope linker evolution (PELE). Rsc Chem Biol, 3, 2022
8AYF	Crystal structure of human Sphingosine-1-phosphate lyase 1 分子名称: ACETATE ION, GLYCEROL, Sphingosine-1-phosphate lyase 1 著者 Giardina, G, Catalano, F, Pampalone, G, Cellini, B. 登録日 2022-09-02 公開日 2023-09-13 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study. Sci Rep, 13, 2023
7F5P	The crystal structure of VyPAL2-C214A, a dead mutant of VyPAL2 peptide asparaginyl ligase in form I 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide Asparaginyl Ligases, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Hu, S, Sahili, A, Lescar, J. 登録日 2021-06-22 公開日 2022-06-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for proenzyme maturation, substrate recognition, and ligation by a hyperactive peptide asparaginyl ligase. Plant Cell, 34, 2022
7F6D	Reconstruction of the HerA-NurA complex from Deinococcus radiodurans 分子名称: HerA, NurA 著者 Xu, Y, Xu, L, Guo, J, Hua, Y, Zhao, Y. 登録日 2021-06-25 公開日 2022-06-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.85 Å) 主引用文献 Mechanisms of helicase activated DNA end resection in bacteria. Structure, 30, 2022
7F0D	Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Zhang, W, Sun, Y, Gao, N, Li, Z. 登録日 2021-06-03 公開日 2022-06-29 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structure of Mycobacterium tuberculosis 50S ribosomal subunit bound with clarithromycin reveals dynamic and specific interactions with macrolides. Emerg Microbes Infect, 11, 2022
7F5J	The crystal structure of VyPAL2-I244V, a more efficient mutant of VyPAL2 peptide asparaginyl ligase in its active enzyme form 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Hu, S, Sahili, A, Lescar, J. 登録日 2021-06-22 公開日 2022-06-29 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.593 Å) 主引用文献 Structural basis for proenzyme maturation, substrate recognition, and ligation by a hyperactive peptide asparaginyl ligase. Plant Cell, 34, 2022

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